Syngnathoides biaculeatus (alligator pipefish): 133493698
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Entry
133493698 CDS
T09681
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133493698 (cbll1)
04131 Membrane trafficking [BR:
sbia04131
]
133493698 (cbll1)
04121 Ubiquitin system [BR:
sbia04121
]
133493698 (cbll1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133493698 (cbll1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
133493698 (cbll1)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133493698 (cbll1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133493698 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
DZR
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133493698
NCBI-ProteinID:
XP_061663360
LinkDB
All DBs
Position
20:9743150..9747426
Genome browser
AA seq
481 aa
AA seq
DB search
MLTELPSMLPRAYRDNDLQGSDGSGSLGGPDVRRRIPIKLISKQPLRIKPPPRVQRPGGR
PPLKSDAPEKDDNFGFKQEKFEFGGKAGDVFAAQRRYPQPLFWDYKLNLIGERDDVPIHF
CDKCGLPIQLYGRMIPCKHVFCYECALLHEKKGEKMCPGLTTYSCMDPVQRIEQCQRGSL
YMCSVVSGCKRTYLSQRDLQAHVNHRHLRSAKSSSSGRQEPVHLPPASDVPERFRVPPPH
VTKNHVHLANQHPHGGHDPYGQPPPPGPHDGPPETYRIATVTTRKHSNLITVPIQDDSSS
VPPGQPPHHRPGDYPGQPPVVSHPHRMMAPPPPQQHFGPPPPPPPISHPMQHPPQGSGTP
HMVYNQAPPPPMSTAPPPITPPPGHIMAQMPPYMNHPPPGPPPQHTGPPVNGPPPHHYNP
NSMQQFPEDQGTLSPPFNQPGGLSPGMWAAPRGPPPPRMPGPPPGPGPHHPDQGRYRPYY
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccgagttaccgtcgatgcttccaagagcttaccgtgataacgatctccaagga
agcgacggctccgggagcttgggcggcccggacgtccggaggcgcatccccatcaagctc
atctccaagcagcccctgaggatcaaaccgccgccccgcgtccagaggcccgggggcagg
ccaccgctgaaaagcgacgcgccggaaaaagacgataacttcgggttcaagcaagaaaag
tttgagtttggcggtaaagccggagatgtgtttgctgcccagaggagatacccgcaaccg
ctgttttgggactataagttgaatctcatcggcgagagagacgacgtcccgattcatttc
tgtgacaaatgcggccttcccatccagttgtacgggcgcatgattccctgcaaacacgtc
ttctgctacgagtgcgccttgctgcacgagaagaaaggagagaagatgtgccctggcctg
accacgtacagctgcatggacccggtgcagcgcatcgagcagtgccagcgcggctcgctg
tacatgtgcagcgtggtgtcgggctgcaagcgcacctacctgtcccagcgggacctgcag
gcccacgtcaaccaccgccacctgaggtcggccaagtcgtcgtcgtcgggccgccaggag
cccgtgcacctgccgccggcgtccgacgtccccgagcgcttccgcgtgcccccgccccac
gtgaccaagaaccacgtgcacctggccaaccagcacccgcacggcggccacgacccgtac
gggcagcctccgcccccgggccctcacgacggtccccccgagacgtaccggatcgccacg
gtgaccacgcgcaaacacagcaacctcatcaccgtgcccatccaggacgactcgtcctcg
gtcccgccgggccagccgccccaccaccgcccgggcgactaccccgggcagccgcccgtg
gtgtcgcacccccaccgtatgatggcaccgccgcccccgcagcagcacttcgggccgcct
cccccgccgccgcccatcagccaccccatgcagcaccctccccagggttccgggacaccc
cacatggtatacaaccaggctccgccgccacccatgtccacagccccgcctcccatcacc
ccgccgccgggacacatcatggcccagatgcctccctacatgaaccacccgccgccgggt
cctcccccccaacacaccggaccccctgtaaatgggccccctcctcatcactacaatccc
aactccatgcagcagtttcccgaagaccagggcaccctcagcccgcccttcaaccaaccg
ggaggtctcagtcccggaatgtgggccgctccgagggggccgccccctccgcggatgccg
ggtcccccgcccgggcccggcccccaccacccggaccagggtcgctaccgaccttattat
cagtaa
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