Syngnathoides biaculeatus (alligator pipefish): 133493949
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Entry
133493949 CDS
T09681
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sbia04054
]
133493949
Pattern recognition receptors [BR:
sbia04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133493949
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PRY
SPRY
WHD_NOD2
FISNA
LRR_6
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133493949
NCBI-ProteinID:
XP_061663938
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All DBs
Position
20:5231205..5235206
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AA seq
944 aa
AA seq
DB search
MASHRRVPSGSVFSVNNEQIATFTRQLQDNLRTAYINAPEGRTELCRQPYLVDIYTDLYI
TCGADIIANKEHEVLQMEMCGVAKKSVEPCDIFKSDSGKPKLIRTLLTVGFAGMGKTFLV
RKFVLDWARRKTNKDAHFIFPFTFRELNLEKGKTFSLANLIRYSIPEAAVLSMDTLNVLF
VRLQASGKRDYESSNIKMLFVLDGWDECRLKLDLSNKTKRDFDVTEAYPVEVLLENLINR
NLLPCARVWITARPAAAHDIPPDLVDKKTEVKGFSDSQRLDYFRKRFPDKEESIVRHIQK
SRTIFIMCHMPIFCWLTTVVLQDYMDKGKDRELPQTLTELYTEFLLYHLDRSRERGTKKS
IKYIRALARLAFNQLMRKEQLFYENDLQSSGLDYRQVAKHSGLFSEVFKQVHPLKKNQKA
KMFQFIHLTVQEYLAALYVMTSLFHDNKNVFASPELSLERLVTLCKQKPIAQVHEMALQK
ASESDGNLDLFLRFLLGLSLQCNQDTLHQLLKVPQHSGNNKSDAVLLIKKRIEQNTPGKN
INLFYCLKELKDDSLLEEIQRYLSSGRLSSDNLPLDMWSALVFFLRTSDKAMDCFDLKQY
SASEVGLMMLMPVVKASQKSLLNDCNLNEKSYRLLTSVLSSPSNLRHLDLGDNDLYDRGV
EILSDELAKPHCILRVLRLSGCMITAPGCVSLAKALKLNPSHLEVLDLSYNHPGEEGKRI
FTKAQMNPSSSLKTVNLDHGGKERLISGLKKYLCRPTLDPNTAHKCLQLSDRCKRATVVL
EEELYPINPQRFSSWRQVLCKDGLSGRCYWEADLEGKVSVAATYDTIRRIGEGDDVLLGA
TEASWALLCREDGTYAVRHRDRTENLEPLPSPESRKVAVFLDHPGGVLSFYKVTSRGTIL
LHTFHATFTQPLYPAFGFGFDNGFDGFGDSVSIGGENVSIFTRF
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcaccgtcgtgttccttcaggtagcgtcttctctgtcaacaacgagcagatc
gccacattcacgcggcagctgcaagacaacctgcggactgcctacatcaacgctcccgag
ggaagaactgagctctgtaggcagccgtatctggtggatatctacacagatctgtacatc
acctgcggcgccgacataattgccaacaaggagcacgaggtccttcagatggagatgtgc
ggcgtggccaagaagtctgtcgaaccgtgcgacatcttcaaaagtgacagcgggaagcca
aagctcatccgcacgctgctcaccgtcggctttgcggggatgggaaaaacattcctggtc
cgcaagtttgtgctggactgggctcgtcggaaaaccaacaaagacgcgcacttcatattt
cccttcaccttccgggagttgaacctagagaaagggaaaaccttttcgctggcaaacctc
atccgatactccatccccgaggcggcggttctgagcatggacacgctgaacgttctattt
gtcaggctgcaggcgtccgggaagcgtgactacgaaagcagcaacatcaaaatgttgttt
gtcctggatggatgggacgagtgccgcctcaaactggacctgagcaacaagaccaagagg
gactttgacgtgaccgaggcctaccctgtggaggtgctcctggagaatctcatcaacaga
aacctgctcccttgcgccagagtctggatcaccgcacggccggcggcggcgcacgacatt
ccacctgatctcgtcgacaaaaaaaccgaggtgaaaggattcagcgactcccagaggctg
gactacttcagaaagaggttcccagataaggaggagtccatcgtcaggcacatccagaaa
tcccgcaccatcttcatcatgtgccacatgcccatcttctgctggctcaccaccgtagtt
cttcaggattatatggacaaggggaaggacagagaactgcctcaaaccctgaccgagctg
tacacagagttccttctttaccacctggataggtcgagggagagagggacaaagaagagc
atcaaatacatcagagcgctcgcaagactggcattcaaccagctgatgaggaaagagcag
ctcttttacgaaaacgacttgcagagcagcggcctcgattaccgtcaagtcgcgaagcat
tctggattgttcagtgaggtgtttaagcaggtacatccactgaagaaaaaccagaaggcc
aagatgtttcagttcatccatctgaccgtccaggagtacctggctgctctgtacgtgatg
acgagcctcttccacgacaacaagaacgttttcgcctctccggagctgtcgctcgaacgc
ctcgtcacgctttgcaagcagaagccaatcgctcaggtccacgagatggcgctccagaaa
gcctccgagagtgacggaaacctggacttgttcctgcgcttcctgttaggcctgtccttg
cagtgcaaccaggacacccttcaccaactgctcaaggttcctcagcacagtgggaacaac
aagtccgacgcagtcctgttgatcaagaaaagaatagagcaaaacactccgggaaagaac
atcaacttgttttactgcctaaaggagctgaaggacgactccctgctggaggagatccaa
cgatacttaagttcaggacgtttgtcctctgacaacctgcctctggacatgtggtcggcc
ctggtcttcttcttgcggacctccgacaaagccatggactgctttgaccttaagcagtac
tctgcgtcggaggtggggctcatgatgctgatgccagtggtcaaagcctctcaaaaatca
ctgctcaacgactgcaacctgaacgagaaaagctatcgactgctgacctccgtcctcagc
tcgccatccaacctgaggcatttggatctcggcgacaatgacctgtacgacagaggggtt
gagatcctctccgacgaactggcgaagccgcactgcatcttgcgagtcctcaggctgtca
ggctgcatgatcaccgcgccaggatgtgtttcgttggccaaggctctcaagttgaacccc
tcgcaccttgaagtgctggacctgagctacaatcacccgggagaggaaggaaagaggatc
ttcacgaaggcccaaatgaatcccagctccagcctgaagactgtcaacctggatcacggc
ggcaaagaacgtttgatttccggcttaaagaaatatctttgcagacccacgttggacccc
aacacggcccacaagtgcctccaactgtctgatcgctgcaaaagggcgacagtggtgctg
gaggaggagctgtaccccataaacccgcagaggtttagcagctggcgacaggttctttgc
aaggacggactgagcggacgctgctactgggaggcggacttggaggggaaggtctccgtg
gccgcgacctacgacacgatccggcggatcggcgagggcgacgatgtgcttctgggagcc
acggaagcctcctgggcgctgctgtgccgcgaggacggcacctacgcggtgcggcaccgg
gacaggacggagaacctcgaacccctcccctctcccgagtctcgaaaggtggctgtattt
ctggaccaccctggtggcgtgttgtccttctacaaagtgacctcgcgggggacgatactc
ctccacaccttccacgccaccttcacccagccactttacccagccttcggttttggcttt
gataacggatttgacggcttcggagactctgtatccatcggcggagaaaatgtgtccatc
ttcacccgcttctga
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