Syngnathoides biaculeatus (alligator pipefish): 133494374
Help
Entry
133494374 CDS
T09681
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133494374 (dennd4c)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133494374 (dennd4c)
BRITE hierarchy
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR
PPR_3
PPR_long
Peptidase_C50
Motif
Other DBs
NCBI-GeneID:
133494374
NCBI-ProteinID:
XP_061664129
LinkDB
All DBs
Position
21:2951317..2966206
Genome browser
AA seq
1905 aa
AA seq
DB search
MSTSTAGARPAMTKDKGHRVTDYFVVAGLTDKSAAPERDLSEAKSGGPKAPITDLAVINR
SAGEAVPEGFTCIDSTHAGQPANLNHGSLKSPELFLCYKRSRGKPPLIDVGVLYEGKERL
IQGCEVIQATPYGRCANVNNSSAASQRIFVTFRRAPPVQPQNSLAVTDICVIVTSKGETP
PHTFCKVDKNLNCGMWGSSVFLCYKKSVSASNSITYKAGLLFRYPEEDYESFPLSESVPL
FCLPMGAKIECWAPNTLSPLPVFSTFVLTSSSGEKVYGSAIQFYEPYPAELLSEKQKIHL
GLLTAVEKKMIPNRPLNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISH
FMHNVSFPSPQRPRILVQLSAHDTLILSQPVSTPLPLSGADYGTLLMNLGSENCATLLHF
VLLESKILLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVD
SRYFDLYDPPADVVCVDLDTDTIYLSDEKKHNNWKNLPKKPCKSLLNSLNSLHQQLATVS
VRQSAPTDSAVDMTPIEADFSWHKRRTGLEMEIQEAFLRFMASILKGYRYYLKPITQAPS
EKATAADSLYDLQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCV
EKLFPSCKITDKGAKVEGESSEDARLLELDESQKSEHTVFVTPPEPPAEDGHEPRPRYTY
KGFPRLKTELFERPKELRPAISSRAAGASLASSPALLAKRTKQEIKLASRLAKRFYADPQ
LWARCLFSHCYSLWFICLPAAVRLAGSKSRAMQQAYDVLLKMRTTEVEVLDEVCYRVVMQ
LCGVWGLPVMAVRVLVEMKKAGVHPNAITYGYYNKAALESPWPSRNRSGLFMWTKLRNVL
RGVAQFKQNRSLSRKKPTGSDTGGASSDRLSHNSADGSGDLDAEEQPLARDPRDAQLERC
PASSRSDRARDSKDELNGETAESPLSADLPDKKRQKGRMQQNAEGDVTELAEPAGSVDPP
PSVPSIVKLSVGSLDAGAEPVKAQLFRRHSKAEDVSLPDHDASTEADYAADRKQHQQQHQ
QHQQQQQQKKPFAERSRSFSAETRAGMLSEKGVADMAGQLGADARILAAALFPGQTANSP
GGGATRANLFQDVEEEPEDVQSPTAGKPPAEEDEGEGTAEKPERKLCQTNEDESGVRAAN
LERADVEVGADPLSLLASESPESAPVNGREAARSVPHVVSRNLAEEIEMYMSLRSPLGAK
SSSMELRQSEGDSVDAPRPKQSLERRSSLPAPAPPTPTGSPVDTPERSPVSITRSKTFAA
KTKPSLGRMASPSLKSPLVKSSQGGSLGSVINSISAIKMDNLLSGPKMDVLKSGMKQAAN
VASKMWVAVATAYSYSDDEEEQGQSGGGFPASLDEHTLSGCDAEDGAVPVSVASGLNRSC
ASIGSSSGSSDAGRAAQHAYATPGRAGRTPDSEEGSSHHASSSSIFQSAALEVLMSSCSQ
CRSCEALVYDEEIMAGWTANDSNLNTNCPFCRVAFLPLLHVEFHDLRALAGFYMNPSASG
DSIHSCSSGQPTAPSDVRAQDHVGFEPGETLARSPGAQKSLILEPAQSDPLGLVERQASA
KGCGGTSLTRSNSVGGPLQGLDSPLRPGHGVSTASLPGRLDEASEGMASERPNPKPVSVP
YLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPSHLPGLILTSE
HCNNGVQLPLTSLSQDSKHVYIQILWDNINLHQEAGDPLYLLWRSLLEKKGTLAPTDHQE
IRTLLNTIVRNIQTNDVYGPINLLIREVKRRPEDFKRQRSIYREILFLSLVALGRENIDV
EAFDREYQLAYEELSAEQLESLRPLDRPPAPSVQCCLKCFGTPFI
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaacagccggtgcgcgtcccgccatgaccaaggacaagggccaccgcgta
accgactacttcgtggtcgccggcctgacggacaagtcggcggcgccggagcgcgacctc
tcggaggccaagtccggcgggcccaaggcccccatcaccgacttggccgtcatcaaccgg
tcagcgggcgaggcggtgcccgagggcttcacctgcatcgacagcacccacgccggccag
ccggccaacctcaaccacggcagcctgaaaagccccgagctcttcctgtgctacaaacgg
agtcgagggaagccgccgctcatcgacgtcggcgtcctgtacgaaggcaaggagcgcctc
atccagggctgcgaggtcatccaggccacgccgtacggccgctgcgccaacgtcaacaac
agctcggccgcctcgcagcgcatcttcgtcaccttccgccgcgctccgcccgtgcagccg
cagaactccctggcggtgaccgacatctgcgtcatcgtgaccagcaagggcgagacgccg
ccgcacaccttctgcaaggtggacaagaacctcaactgcgggatgtggggctcgagcgtg
tttctgtgttacaagaagtcggtgtccgcatccaactccatcacttacaaggccggtctc
ctgtttcgctacccagaggaggactacgagtctttccccttgtcggagtcggttcctctc
ttctgcttgcccatgggggccaagattgaatgttgggcgccgaacaccctctcccctctc
cccgtcttctccacctttgtgttgaccagcagctcgggtgagaaggtgtacggctcggcc
atccagttctacgagccgtacccggcggagctgctgagcgagaagcagaagatccacctg
ggcctgctgaccgccgtggaaaagaagatgatccccaaccggcccttgaacaccaacaag
tgcatctgcctcctctctcgctggcccttctttgaatccttccgcaaattcctgatgttc
ctctacaagctgtccgtctcgggcccgcacccgctgcccattgaaaagcacatttcacac
ttcatgcacaacgtgtcctttccgtcaccgcaaaggcctcggatcctcgtccagctctct
gcacacgacaccttgatcctctcccagcccgtctccacacctttaccgctcagcggcgcc
gactacggcaccctgttgatgaacctgggctcggagaactgcgccacgttgctgcacttc
gtcctgctggagagcaagatcctgctgcactcgctgcggccggcggtgctcaccggcgtg
gcggaggccgtggtggcgatgatcttccccttccagtggcagtgtccctacatccctctg
tgccccctctccctagcgggggtcctcaacgccccgtgtccttttatcgtgggcgtcgac
tcccgctacttcgatctctacgaccctccggcagacgtcgtctgcgtggacctggacacc
gacaccatctacctgtctgacgagaagaagcacaataactggaagaacctcccgaagaag
ccctgcaagagcttgctcaactccttgaacagtttgcaccagcagctggccacagtttca
gtccggcaaagtgcgccgacggactcggcggtggacatgacgcccatcgaggccgacttc
agctggcacaagaggaggaccggcctggagatggagatccaggaagccttcctgcgcttc
atggcgtccattctcaaaggctaccgctactacctgaagcccatcacccaggcgccatct
gagaaggccacggccgccgactccctgtacgacctgcaaggtttcctcaaaagcagagac
cgggctcaccagaagttctactcgcagctgaccaagacccaaatcttcatccgcttcatc
gaggagtgcacttttgtcagcgacaaggacaccggcctggcctttttcgacgactgtgtc
gagaagctctttccctcgtgcaaaatcaccgacaagggcgccaaggtcgaaggggaatcg
tcggaggacgcccgcctgttggagttggacgagtcgcagaagagcgagcacacggtcttc
gtgacgcctcccgagcctccggccgaggacgggcacgagccgcggcccagatacacttac
aaaggtttcccccgactgaagacggagctgtttgagcgtcccaaggagttacggccggcc
atcagcagcagagcggcgggcgccagtctcgccagcagccccgcgctgctggccaagcgg
accaagcaggagatcaaactggcgtccagactggcaaagcgcttctacgccgacccgcag
ctgtgggcccgctgtcttttcagccactgctacagcctgtggttcatctgcttgccggcc
gccgtccggctggccgggtccaagagccgcgccatgcagcaggcctacgatgtcctcttg
aagatgaggacgaccgaggtggaggttttggatgaggtgtgttacagagtggtcatgcag
ctctgcggcgtttggggtcttcccgtgatggccgtccgagtgctggtggagatgaagaaa
gccggcgtccaccccaacgccatcacatacggatattacaacaaggcagccttggagagc
ccctggcccagccgaaaccgcagcggccttttcatgtggaccaagcttcgcaacgtgctg
cgtggggtcgcccagttcaagcagaaccgctctttgtccagaaagaaacctacggggtct
gacacgggaggcgcgtcgtcggaccgcttgagtcacaacagcgcagacggctcgggcgac
ctcgatgcggaggaacaaccgttggcacgcgacccgagagacgcccaattggagcgctgt
cccgcaagcagccggtccgatcgggcccgggactccaaggatgagctgaacggggaaact
gctgagtctccgctctcggcggaccttcccgacaagaagagacaaaagggcagaatgcag
cagaacgcagaaggtgacgtcactgaattggcggagcctgccggttccgtcgacccgccg
ccctccgtccccagcatcgtgaaattgtccgtcgggagtttggacgctggcgccgaacca
gttaaggcacagctgttccgaaggcacagcaaggccgaggacgtgtctctgcctgaccac
gacgcctcaacggaagctgactacgcggcagatcggaagcagcaccagcagcagcaccag
cagcaccagcagcagcagcagcagaagaagccctttgccgagcgcagcagaagtttcagc
gccgaaacgcgggccgggatgctctcggaaaaaggcgtggcggacatggccggccagctc
ggcgccgacgcccggatcctggctgcggcgcttttccccgggcagaccgcaaacagtccg
ggcggcggtgcgaccagggctaacctttttcaggacgtggaggaagaacccgaagacgtc
caaagtccgactgcggggaaaccgccggcggaggaagacgagggtgagggaaccgcggag
aagccggagaggaagctgtgtcaaacaaacgaggacgagtctggagtgcgcgcggccaac
ctggaaagggcggacgtggaggtgggggcggatcctctttccctcctggcgtccgagagc
ccggagtctgcccccgtaaacggccgggaggctgcccgctccgtgccccacgtggtctct
cgcaacttggcggaggaaattgaaatgtacatgagcctgcggagccccctgggcgccaag
tcctccagcatggagctcaggcagtcggagggagactccgtcgacgcgccgcggcccaag
caatctctggagaggaggtccagcctccccgcgccggcgccgccgactcccaccggctca
ccggttgacactcccgagcgcagccccgtctccatcactcgctccaaaacgttcgccgca
aagaccaagccgtccctcggcaggatggcgagtccgtccctaaaatcgcccctggtcaag
tcctcccagggggggtcgctgggctccgtcatcaactccatttcagccatcaagatggac
aacttgttgtctggacccaaaatggacgtgctcaaatctggaatgaagcaagcagccaac
gtcgccagcaaaatgtgggtggccgtcgccaccgcttactcgtactcggacgatgaggaa
gaacaaggtcaaagcggaggaggcttccccgccagcctggacgagcacacgctgagcggt
tgcgacgccgaggacggcgccgtcccggtctcggtggccagcggcctgaaccggagctgc
gccagcatcggcagcagcagcgggagcagcgacgccggtcgagcggcgcagcacgcgtac
gcgactcccgggcgagcgggcaggactcccgactctgaggagggctcgtcgcatcacgcc
tcctcgtccagcatcttccagagcgccgcgctggaggtgctgatgtccagctgctcccag
tgtcgctcctgcgaagcgctggtgtacgacgaagagatcatggcgggatggacggccaac
gactccaacctgaacacaaattgtccgttctgtcgcgtggccttccttcccctgctgcac
gtcgagtttcatgacttgcgcgcgctggccgggttctacatgaatcccagtgcctccggg
gacagtattcacagttgcagcagtggccaaccgacagcccccagcgacgtgagggcgcag
gaccacgttggtttcgaacctggggagactctggctcgcagccccggagcgcaaaaaagt
ttgattctggagccggcgcagtcagacccgctgggtctagtggagcgccaggcctcggcc
aagggatgcggcggcacgtcgctgacgcgcagcaacagcgtcggcggccccctgcaaggc
ctggactcgcccctgcgacccggtcacggcgtctccaccgccagcctgcccggcaggctg
gacgaggcctcggaaggaatggcgagcgaaaggccgaaccccaagcctgtgtccgtcccg
tacctcagccccttggtgctgcgcaaggaactggagacgctcctggagaacgaaggggat
caggtgatttacacccacaagttcctgagtcagcaccccatcatattctggaacctggtg
tggtatttccgacgcttggacctgccctctcacttacccggtctcatcctgacctctgaa
cactgcaacaatggcgtgcagctgcccctgacgtcgctgtcccaagacagcaagcacgtc
tacatccagatcctgtgggacaacatcaacctccaccaggaggccggagaccccctctac
ctgctttggaggagcttattggaaaagaagggcaccctggcgccgacggatcaccaggag
atccgcacgctgctcaacaccatcgtccgcaacatccagaccaacgacgtctacgggccc
atcaacctgctcatccgggaggtcaaacgccggccggaggacttcaagcgccagaggagt
atctaccgagaaatactgtttctctccctcgtggccttgggacgagagaacatcgacgta
gaggctttcgacagggagtaccagctggcctacgaggagctcagcgccgagcagctcgag
tctctgcggcctttggaccggccgcccgcccccagcgtccagtgctgcctcaaatgcttc
ggcaccccgttcatctaa
DBGET
integrated database retrieval system
