Syngnathoides biaculeatus (alligator pipefish): 133494461
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Entry
133494461 CDS
T09681
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133494461 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133494461 (chrnb1)
Ion channels [BR:
sbia04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133494461 (chrnb1)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
133494461
NCBI-ProteinID:
XP_061664317
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All DBs
Position
21:2462043..2466279
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AA seq
492 aa
AA seq
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MKISDVLLLVCCACGLSSPGGAADTEQALMKQIFTNYNLKVRPARTPDERVLVRVGMTLS
SFVGLNMKNEEMSTVVVMNLEWTDYNLSWDPKEHDGIEVLRIPASKVWLPDIVLINNNDG
VFDVALRVHVQVYSNGRVTWTPPALYLSSCGVRVTYFPFDWQNCSMQFRSYTYDSTEIEL
QYTLDANGNEIREIQLDEAFSESGEWHIRHKPCRKNMNNDLYEDMSFYLIIERKPLYYVL
NIIIPCILITVIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVK
YIMFTMILVTCSVILSVVVLNLHHRSPNTHMMPLWVRRIFIHMLPSYLCMLRPKAEVPLA
LKVLPAQREKKVFTINKATDEYFIRKPDNSILFPKPDRFQAEGKTSELRKFIDGPSSYLS
LPPELKSAVEAIAYIAEALQAEKDYEALKEDWQYVAMVVDRMFLWIFVIFTTVGTLAIFI
KASLNRAPTDPF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctcagacgtgctcctgctggtgtgttgcgcgtgcggcctgagttcaccggga
ggagccgcggatacggagcaggctctcatgaagcagatcttcacaaactataacctgaaa
gttcgtcctgcgcgcacccctgacgagcgagtgctggtccgggtgggcatgaccctctcc
tcgtttgtcggactgaatatgaaaaatgaagaaatgagcaccgtcgtggtcatgaatttg
gagtggaccgattataacttgtcgtgggatcccaaagagcacgacgggatcgaggttctg
cgcatccccgcttccaaagtgtggctgccggacatcgttctgatcaacaacaacgacggc
gtgttcgacgtggcgctgcgtgttcacgtgcaggtgtatagcaacggcagggtgacctgg
acccccccggcgctctacctgagctcctgcggcgttcgggtgacgtatttccccttcgac
tggcagaactgcagcatgcagttccgctcctacacgtacgactccaccgagatcgagctg
cagtacacgctggatgcaaacggcaacgagatccgggaaatccaactggacgaggccttc
agcgagagcggcgagtggcacatcagacacaagccgtgcaggaagaacatgaacaacgac
ctgtacgaggacatgagcttctacctgatcatcgagaggaagccgctctactacgtgctg
aacatcatcatcccgtgcatcctcatcaccgtcatcgccatcttcaacttctatcttccg
cccgacgcaggtgaaaagatgggactgtccatcaacgttctgctcaccctcaccgtcttc
ctgctgctgctggcggacaaaatccccgagacctcgctgggcgtccccatcatcgtcaag
tacatcatgttcaccatgatcctggtcacctgctccgtcatcctcagcgtggtcgtgctc
aacctgcaccaccgctcgcccaacacccacatgatgcccctctgggtccgcaggatcttc
atccacatgctgccctcgtacctgtgcatgctgcgccccaaagcggaagtgcccctggcc
ctcaaggtgttgcccgcccagcgggagaaaaaggtcttcaccatcaacaaggccaccgac
gagtacttcatccgcaagccggacaactccatcctgttccccaagcccgacaggttccag
gcggagggcaaaacatcggagctcaggaagttcatcgacggccccagtagctacctttcg
ctgcccccagaactcaagtccgccgtcgaggccatcgcgtacatcgctgaagctctgcag
gccgagaaggactacgaagctctgaaggaggactggcagtacgtggccatggtggtggac
cgcatgtttctctggatttttgtcatcttcaccacagtgggcaccttggctatatttatt
aaggccagcctcaatcgcgcacccacagaccctttctag
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