Syngnathoides biaculeatus (alligator pipefish): 133494615
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Entry
133494615 CDS
T09681
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133494615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133494615
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sbia04031
]
133494615
Membrane trafficking [BR:
sbia04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
133494615
GTP-binding proteins [BR:
sbia04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
133494615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Raptor_N
Motif
Other DBs
NCBI-GeneID:
133494615
NCBI-ProteinID:
XP_061664584
LinkDB
All DBs
Position
21:complement(6308650..6310819)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLETQRQVSRQEAERLAGVYGMRYVETSARDAINVERAFTELTKDIFALVRSGDI
GIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatctggctctatcagttccgtctgatcgtgatcggcgactccacggtgggc
aagtcgtgcctgatccgccgcttcaccgagggccgctttgcccaggtgtcggaccccacg
gtgggcgtggacttcttctcccggctcgtggagatcgagccgggcaagcggatcaagctc
cagatctgggacaccgcgggccaggagcgcttcaggtccatcactcgggcttactaccgc
aactcggtgggggggctgctcctgttcgacatcaccaaccgccgctccttccagaacgtg
cacgagtggctggaggaggcccgcagtcacgtgcagccgcacagcatcgtcttcctgctg
gtgggccacaaatgcgacctggagacgcagcgccaggtgagccgccaggaggccgagagg
ctggcgggggtgtacggcatgcgctacgtggagacgtcggcgcgcgacgccatcaacgtg
gagcgcgccttcaccgagctgaccaaggacatcttcgccctggtgcggtccggcgacatc
ggcatccaggagggctgggagggggtcaagagcggcttcgtccccaacgtggttcactcc
tccgaggaggtgaccaagagcgaccgccgctgcctctgttga
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