Syngnathoides biaculeatus (alligator pipefish): 133494684
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Entry
133494684 CDS
T09681
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133494684
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133494684
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
SH3_9
SH3_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
133494684
NCBI-ProteinID:
XP_061664706
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All DBs
Position
21:5423396..5431464
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AA seq
1275 aa
AA seq
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MEKSKQHRKLGAAFSKDAVSPKGKPEENFPTALSLRLNVVAGPECLPAREESQETLRGKL
RNQQDDSTELSALFRELSAHLLAVDSEDQVIFVTFKTFEEVWKFTTYYTLGLLGHFMEQL
LFDQKLWLLSLEEQLRIEVSTPEDTLRVFYTCALMHEASLFARCAASQIFDSSTSGGDLY
LEQGDIALFEAPLQDSGWTVLCLADGARGTTPKPTLEPVIPFHQWFLKSCPESILVGDGK
PASDLPLHFATGACVATVQYDAEGPDELSVSPGDRIVIMGRLVSCHRWFLGAKEETGEAG
LVATSQVQRSGDTYESVNALLDGEEVNFFNLREDDIIEETTALLERTSQSDVGHAYKLDV
FSYQDSEKNRSKNSSASVEPDVAENTEWLFDREKHLTPVRVCPRIQEDAIDPVEGRRLKT
PRFTVQPAEERQDTENIALLLSFFEGRESKDEFRVLYLQSPEHLSSSIFCGHSCDDELIS
FLSVARETARKKRQLWSQTRLCFLLGKFSAAKSKFSQARVYFEEALAVPRETFKDVSLLA
SIYSNLAGIYFLQKNTESFFGMSERLVALLMGTSHCLECVKESSVLEYALKKAVLSQNTM
AEARACYFLVMYHWTNKQGSQVVPYLERLLVLSTTAQGRSSISPSGGHLTLGRLYREMGL
HHLSICSAARASRHPSTTLTDSFSSLLLVSDNTTDEDSFPAHLAPYLHCCLSLTDNQGTP
RHGQHSALKHQLAVCLSQLFYRQGMLDNAIRLMRVLIGETPPSADPAEQKNALIWLAWLH
IHDRQPSVGLHVLDSVSAALPEHYTVPLKGLVLNMRGVALRCMGDLRRAAESYHAAVEIC
QEYKDMPNWAVAHANLGLMCLKAGAKGLAQKHLMESVQLFSALDGGHEATFIAVLLELGQ
HCVKERRMHHGKGCYEWALLLAIGANLSEWQLRAVRRLCHLYECESPDQARHIIYSQYQV
RLLRGTRDREREGDAQEAVSQLFLSLATDRAYRAALDHTKSSLGIFIDLGRREKEAYGWL
QAGKIYHLLGQVELVELYVQAAQDVALSTGDTKFILNLLEAAGDIFFNSSQDRDKAITYY
RDRALPIAARSDSVSSKLRLCNKLTEVMLSLRLYGDALEFAHTALDISITLGERLNERVA
YHRLAFLHHRLGQCELAEHFYLKTLSLCPAPLQFDEEALYYARVYRTLGDILFYKLKDPF
DAAGYYHLALAAAMDVGDKKSQLVLCTRLATLYHNFLKDRQLSLFFYKKSRGLAAELSVR
RVNAALADRAGVAVY
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagcaaacagcaccgcaaactcggtgccgctttctcaaaagatgccgtcagt
ccgaagggaaaacctgaggagaactttcctacagctttgtcactgcgcctgaatgtggtc
gcgggtcccgagtgtcttcctgcacgcgaggagtcgcaggaaacgctgcgagggaaactg
cgcaatcagcaggacgacagcactgagctcagcgctctctttagggagttgtctgcccac
ctgctcgccgtcgacagtgaagaccaagtgatttttgtcacgttcaaaaccttcgaggaa
gtgtggaagttcacaacctattacacgctgggtctcctgggtcatttcatggagcagctg
ttgtttgaccagaagttgtggctcctttccttggaagaacagttgaggatcgaggtctcc
actccggaggacactcttcgtgttttctacacctgcgctctcatgcatgaagcgtcgctt
ttcgctcgctgcgccgcgagccagatttttgacagttccacctccggaggtgatctgtac
ctggaacagggagacattgcgctctttgaggcacccttgcaggactcgggctggactgtc
ctgtgtctggcggacggagccagaggcactacgcccaaaccgacactggagcccgtcata
ccttttcatcagtggtttctcaagtcctgccccgagagcattttagtgggtgatggcaaa
cctgccagtgacctccctttgcactttgccacgggcgcgtgtgtggccaccgtgcagtat
gacgccgaaggtccagacgagttgagcgtgtcaccgggtgatcgcatcgtcatcatggga
cgactggtgtcctgccaccgctggttcttgggcgccaaggaggaaacgggggaagcgggt
ctggtggcgacgagccaggtgcaacgctcgggtgacacttatgagtcggtaaacgctctt
ttagacggagaagaagtcaacttcttcaacctccgtgaggacgacatcattgaggaaacg
actgccttgctcgagagaacatctcaaagtgatgtcggtcatgcgtacaaactagatgtg
ttcagttaccaagactccgagaagaatcggtcaaaaaattcctcagcctcagttgagcct
gacgtcgcagaaaatacggagtggcttttcgaccgagaaaagcacttaacccccgtgcgc
gtttgtccgaggatccaagaggatgcgattgatcccgttgaaggccgacgcctgaaaact
cctcgtttcacagttcagccagctgaagagagacaagacaccgagaacatcgctttgctc
ctgtctttttttgaaggacgagaatccaaagatgagttcagagtgttgtacctacaaagt
cctgaacatctgtcctcctccatcttttgcggccactcctgcgacgacgagttgatctcc
tttctctccgtcgccagagaaactgccaggaagaagcggcaattgtggtcccagactcgt
ttatgcttcttgctgggcaagttctctgctgctaagtccaaattcagccaggcccgggtt
tactttgaggaggctctcgcggtccctcgtgaaactttcaaagatgttagtctgctggcg
agcatttactccaatctggcaggcatttattttttacagaagaacacagagagcttcttc
ggtatgtccgagcgactcgtggccttgttaatgggaacgtcgcactgcctggaatgtgtg
aaggaaagctcggttctagaatacgccctcaagaaagcggttctttctcaaaacacaatg
gctgaagctcgagcttgttattttctggtgatgtatcattggacgaataaacagggctcc
caagttgtcccgtacctagagagactccttgttctatccaccacagcccagggaaggtcc
agcatctctcccagtggagggcatctaaccctggggaggctctacagggaaatgggcctc
caccatctcagtatttgctcagctgcaagagcatcacgccatccttctacgacactgact
gacagcttcagcagcctgctccttgtctctgacaacaccacggacgaggactccttccca
gctcacctggctccatatttacactgttgtctgtctttgaccgacaaccaaggaacacca
cgacatggacaacattcggcgttgaagcaccaacttgccgtttgtctctcgcagctcttt
taccggcaggggatgcttgacaacgcgatccgactcatgcgcgttctcatcggcgaaact
cctccctccgccgacccggcagaacagaagaacgccctcatctggctggcgtggctccac
atccacgaccgtcagccgagcgtgggactgcatgtcttggactcggtctcggccgccctg
cctgagcactacaccgtgccgctgaaagggctggtgctcaacatgcgtggcgtggcgctc
cggtgcatgggtgaccttcgcagggcggcagagagctatcacgctgctgtggagatctgc
caggagtacaaagacatgccgaactgggcagtagctcatgctaaccttgggctgatgtgc
ctcaaggctggagctaaaggactggcccagaagcacctgatggagtctgtgcagctcttt
tctgctctggacggagggcacgaggccactttcatcgctgtgctgctggaactgggacaa
cattgcgtgaaggagcgccggatgcatcatgggaaaggatgctacgagtgggctttgctg
ctggcaatcggtgccaacctctcagaatggcagctgagggcggtaagacgcctgtgccac
ctgtacgaatgtgagagtccagaccaggcccggcacatcatctacagccagtaccaggtc
cggctgcttcgaggaacgcgagaccgagaacgcgagggcgacgcgcaggaagctgtcagc
cagctcttcctgtcgctggccacagacagggcctaccgcgcagctcttgaccacaccaag
agcagcctgggtattttcatcgacctgggccgcagggagaaggaggcgtacgggtggctg
caagccgggaagatctaccacctccttggccaggtggaactggtggaactttacgtgcag
gcggctcaggatgtcgccctgagcacaggagataccaagttcatcttgaacctgctggaa
gctgctggagatatcttcttcaacagcagccaggaccgggacaaggccatcacctactac
agggatcgcgctcttcccatcgcggccaggagcgactcggtgtcaagcaagctgaggttg
tgcaacaagctgactgaagtcatgctcagcctccgactgtacggagacgctctggagttt
gctcacaccgcgctggacatcagcattacgttgggggagcgcttgaacgagcgggtggcc
taccatcgtctggccttcctgcaccaccgtttgggtcagtgtgagctggctgaacacttc
tacttgaagaccctcagcctctgcccggcccctctgcagtttgacgaggaagcgctctac
tacgccagggtctaccggaccttgggggacatccttttctacaaactcaaggacccattt
gacgcggcaggctactaccatttagcgctggccgccgccatggatgtgggcgacaagaag
tcgcagctggtcctgtgcacccgcctggccaccctctaccacaacttcctcaaggaccgc
cagctctcgcttttcttctacaagaagtcccggggactggccgcagagctcagcgtcagg
agggtgaacgcggcgttggcggatcgcgccggcgtcgcggtttactag
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