Syngnathoides biaculeatus (alligator pipefish): 133494793
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Entry
133494793 CDS
T09681
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133494793 (gigyf1a)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133494793 (gigyf1a)
Surveillance factors
Other surveillance factors
133494793 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
CTI
Motif
Other DBs
NCBI-GeneID:
133494793
NCBI-ProteinID:
XP_061664927
LinkDB
All DBs
Position
21:complement(5774707..5783423)
Genome browser
AA seq
1080 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLADYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGAARGRA
AARGSRGRGRGEGGFYQRSIEDAEVGFGRSSREIHRSQSWDDRGERRFEKPLRREGGRPG
FEESAGSGGSGRKEYTRADSDNWRTLREEQEGEEAEPGSNWRVAGPRRDDGGPRSAGWRD
HGGPSESRRRKFDFDFGGSENPSGGRRRAGSEGPEDDRDGLPEWCMDEEDGGMGTFDSSG
AFMPMKKGGKETILEEELDFKGIEKEEEEGSVPDVEKSSSDGDKDKGSKLHSSESKEATS
AAVDGEAKAAAPSSSPSAQCAPPAVESQQSSSGPTVESTQLSISHPLKDSSPANEGTKTQ
VSPNTASSSALPPPPPSSAAPLLPQSGVGDIEDDEGMKHLQQEAEKMVASLQDTSLEEEC
FTQALQQQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMT
LLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPTRGPAGTVSQSS
ANVDDGKGWMQKGGRMDRQAMGNLDQERLKKQQELAALYQQLQQQQLFQLINRCSEQGMI
PSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDLTMNPSTQGPTLEQLQKLQQERRDAE
LRAKREEEEQRKRREEKRRQQEAQKRREDEELYRRKQELIMKLLQQPPQQQGPVAGGSGW
SGASSSGLCKTGKSQTLSLLEMQQETERLLKQQQQQQRAQQQRERHSGMSMGGSSMGSQW
VDGVGIWGGPGGMDGKGGSGGMGMWEEAVKNQAGLRGNGGNNLGLKNSRSSPSLRFEQYM
MRRKRTDEEENLLKLLQGMKPQDGFTTWCEQMLHALNTSASNSSSLDVATIVAYLKEVES
PYAVSEFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNSMRGMNASA
LQSMFQAGHMGKTGLYDNPGGKMKKKQPMMLHSDPSILGYSFHSTAECLSLNEMEMVEDY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactctcaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccctcccccgccatgccaaagtacaagctggccgactaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccggaggacatg
caggataaggaatttgctgctattctgcaagatgagcccatgcagccgctggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtccgtgaacagcgtggctgtactg
cggctcatgggaaagggggtgggcggagccgccccggccggcgcggcccgaggacgcgcc
gccgcgcgaggcagcagaggccggggccgcggggaaggtggattctaccaaagaagtatt
gaagatgctgaggttggtttcggtcgaagctccagagagatacatcgtagccagagctgg
gacgaccgaggtgagcgtcgatttgagaagccgctgcgacgggaagggggtcgtcccggc
tttgaggagtccgcgggctccgggggctccgggaggaaggagtacacaagggctgacagc
gataactggcgcacccttcgggaagagcaggagggggaggaggccgagccgggaagcaat
tggagagtcgctggaccccgcagggatgatggcggtccccgttcagcaggctggcgggat
cacggcggtccaagtgagagtcgtcgtcgcaagttcgattttgacttcggcggctcagag
aacccgagcggcggccgccggcgcgccggcagcgaggggccggaagacgacagggacggc
ctgcctgagtggtgcatggacgaggaggatggcggaatgggaacgtttgactcctcaggc
gcgttcatgcctatgaagaagggtggcaaggagacaatcctggaggaggagttggacttc
aagggcattgaaaaagaggaagaagaggggagtgttcctgatgtggagaagagcagcagt
gatggagacaaagacaagggttcaaagcttcattccagtgagagtaaagaagccacgtca
gctgcggtcgacggggaagcaaaggcggcggcgccttcttcctccccttctgcccagtgc
gcccctccagccgtggagtcccagcaaagcagcagtgggccaacagtggagagcacgcaa
ctgagcatcagccaccctttaaaggatagtagcccagcaaatgaaggaaccaagacccag
gtgagcccaaacactgcctcctcttcagcgctgcctccaccgccgccatcttctgctgct
cccctcctcccccagtctggggtaggagacattgaggatgatgagggcatgaaacacctg
caacaggaggcagagaagatggtggcgtcgctgcaagacacctctttggaagaagagtgt
tttacgcaggcgctgcaacagcagcagcagcaggaaagcaggaacaccgcagccgctctc
cctctgtcgcacgaggccgccatgaagtggttctataaggacccacagggagagattcag
ggtccatttactaccgtggagatgtgcgagtggttccaagctggctactttaccatgacc
ctcctggtcaagcggggctgcgacgagggcttccaacccctgggcgaagtcatcaagatg
tggggccgtgtgcctttcgccccggggccctccccgccgcccctgctggtgagacagcca
ccaccaacgcagcgcccacagcccacccgggggcccgccgggactgtgagtcagagctcg
gccaacgtagacgatgggaaggggtggatgcagaagggagggaggatggatagacaggca
atgggaaacttggaccaggagcgcctgaaaaaacagcaggagctggcagctctttatcag
cagctccaacagcagcagttattccagctcattaaccggtgcagtgagcagggtatgatt
ccttcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacc
tcagcttcacagccgtcaggtggtgaagccagtctttgggatctaacaatgaatccttct
actcagggtccaactctggaacagcttcaaaagctgcagcaggagcggcgagacgctgaa
ctcagggcgaagcgagaggaggaggagcaacggaagcggagggaggagaaaaggaggcaa
caggaggcacaaaagcgaagggaggatgaggagctttacagacgcaagcaggagctgatc
atgaagctactgcagcagcccccccagcagcaggggccggtggcaggcggctccggctgg
agcggggcttcttcctccgggctctgcaaaacgggcaagtcccaaactctctctctgctg
gagatgcagcaggagaccgaaaggctcctgaagcagcagcagcagcaacagcgagcccag
cagcagagggagcggcactctggcatgtcgatggggggatcgtccatgggaagtcagtgg
gtggacggcgtgggcatctggggaggacccggaggcatggatggaaaaggcggaagcggc
gggatgggcatgtgggaagaggccgtcaagaaccaggccggccttcggggcaacggcggc
aacaacctgggcttaaagaacagccgcagcagcccttcactcaggttcgagcagtacatg
atgcgccggaagcggacggatgaggaggagaatctgctgaagctgttgcagggcatgaag
ccccaggacggcttcaccacctggtgcgagcagatgctgcacgcgctcaacacctctgcc
agcaactcctcttctctggatgttgctacaattgtggcctacctgaaggaggtggagtct
ccctacgcagtgtcggagttcatccggtcctacctgggggacacggtggaagccaaagag
ttcgccaaacagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcag
cagcagctatcgaaggaagtggctgggctgaactcgatgcgaggcatgaacgcgagcgcc
ctgcagtccatgttccaggccggccacatgggcaagactggtctctatgacaacccagga
gggaaaatgaaaaagaaacagcccatgatgctgcactctgatcccagcatcttaggctac
tcattccacagtacagcagagtgtttgagcctgaatgagatggagatggtggaggattac
tga
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