Syngnathoides biaculeatus (alligator pipefish): 133494793
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Entry
133494793 CDS
T09681
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133494793 (gigyf1a)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133494793 (gigyf1a)
Surveillance factors
Other surveillance factors
133494793 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
CTI
Motif
Other DBs
NCBI-GeneID:
133494793
NCBI-ProteinID:
XP_061664927
LinkDB
All DBs
Position
21:complement(5774707..5783423)
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AA seq
1080 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLADYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGAARGRA
AARGSRGRGRGEGGFYQRSIEDAEVGFGRSSREIHRSQSWDDRGERRFEKPLRREGGRPG
FEESAGSGGSGRKEYTRADSDNWRTLREEQEGEEAEPGSNWRVAGPRRDDGGPRSAGWRD
HGGPSESRRRKFDFDFGGSENPSGGRRRAGSEGPEDDRDGLPEWCMDEEDGGMGTFDSSG
AFMPMKKGGKETILEEELDFKGIEKEEEEGSVPDVEKSSSDGDKDKGSKLHSSESKEATS
AAVDGEAKAAAPSSSPSAQCAPPAVESQQSSSGPTVESTQLSISHPLKDSSPANEGTKTQ
VSPNTASSSALPPPPPSSAAPLLPQSGVGDIEDDEGMKHLQQEAEKMVASLQDTSLEEEC
FTQALQQQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMT
LLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPTRGPAGTVSQSS
ANVDDGKGWMQKGGRMDRQAMGNLDQERLKKQQELAALYQQLQQQQLFQLINRCSEQGMI
PSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDLTMNPSTQGPTLEQLQKLQQERRDAE
LRAKREEEEQRKRREEKRRQQEAQKRREDEELYRRKQELIMKLLQQPPQQQGPVAGGSGW
SGASSSGLCKTGKSQTLSLLEMQQETERLLKQQQQQQRAQQQRERHSGMSMGGSSMGSQW
VDGVGIWGGPGGMDGKGGSGGMGMWEEAVKNQAGLRGNGGNNLGLKNSRSSPSLRFEQYM
MRRKRTDEEENLLKLLQGMKPQDGFTTWCEQMLHALNTSASNSSSLDVATIVAYLKEVES
PYAVSEFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNSMRGMNASA
LQSMFQAGHMGKTGLYDNPGGKMKKKQPMMLHSDPSILGYSFHSTAECLSLNEMEMVEDY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactctcaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccctcccccgccatgccaaagtacaagctggccgactaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccggaggacatg
caggataaggaatttgctgctattctgcaagatgagcccatgcagccgctggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtccgtgaacagcgtggctgtactg
cggctcatgggaaagggggtgggcggagccgccccggccggcgcggcccgaggacgcgcc
gccgcgcgaggcagcagaggccggggccgcggggaaggtggattctaccaaagaagtatt
gaagatgctgaggttggtttcggtcgaagctccagagagatacatcgtagccagagctgg
gacgaccgaggtgagcgtcgatttgagaagccgctgcgacgggaagggggtcgtcccggc
tttgaggagtccgcgggctccgggggctccgggaggaaggagtacacaagggctgacagc
gataactggcgcacccttcgggaagagcaggagggggaggaggccgagccgggaagcaat
tggagagtcgctggaccccgcagggatgatggcggtccccgttcagcaggctggcgggat
cacggcggtccaagtgagagtcgtcgtcgcaagttcgattttgacttcggcggctcagag
aacccgagcggcggccgccggcgcgccggcagcgaggggccggaagacgacagggacggc
ctgcctgagtggtgcatggacgaggaggatggcggaatgggaacgtttgactcctcaggc
gcgttcatgcctatgaagaagggtggcaaggagacaatcctggaggaggagttggacttc
aagggcattgaaaaagaggaagaagaggggagtgttcctgatgtggagaagagcagcagt
gatggagacaaagacaagggttcaaagcttcattccagtgagagtaaagaagccacgtca
gctgcggtcgacggggaagcaaaggcggcggcgccttcttcctccccttctgcccagtgc
gcccctccagccgtggagtcccagcaaagcagcagtgggccaacagtggagagcacgcaa
ctgagcatcagccaccctttaaaggatagtagcccagcaaatgaaggaaccaagacccag
gtgagcccaaacactgcctcctcttcagcgctgcctccaccgccgccatcttctgctgct
cccctcctcccccagtctggggtaggagacattgaggatgatgagggcatgaaacacctg
caacaggaggcagagaagatggtggcgtcgctgcaagacacctctttggaagaagagtgt
tttacgcaggcgctgcaacagcagcagcagcaggaaagcaggaacaccgcagccgctctc
cctctgtcgcacgaggccgccatgaagtggttctataaggacccacagggagagattcag
ggtccatttactaccgtggagatgtgcgagtggttccaagctggctactttaccatgacc
ctcctggtcaagcggggctgcgacgagggcttccaacccctgggcgaagtcatcaagatg
tggggccgtgtgcctttcgccccggggccctccccgccgcccctgctggtgagacagcca
ccaccaacgcagcgcccacagcccacccgggggcccgccgggactgtgagtcagagctcg
gccaacgtagacgatgggaaggggtggatgcagaagggagggaggatggatagacaggca
atgggaaacttggaccaggagcgcctgaaaaaacagcaggagctggcagctctttatcag
cagctccaacagcagcagttattccagctcattaaccggtgcagtgagcagggtatgatt
ccttcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacc
tcagcttcacagccgtcaggtggtgaagccagtctttgggatctaacaatgaatccttct
actcagggtccaactctggaacagcttcaaaagctgcagcaggagcggcgagacgctgaa
ctcagggcgaagcgagaggaggaggagcaacggaagcggagggaggagaaaaggaggcaa
caggaggcacaaaagcgaagggaggatgaggagctttacagacgcaagcaggagctgatc
atgaagctactgcagcagcccccccagcagcaggggccggtggcaggcggctccggctgg
agcggggcttcttcctccgggctctgcaaaacgggcaagtcccaaactctctctctgctg
gagatgcagcaggagaccgaaaggctcctgaagcagcagcagcagcaacagcgagcccag
cagcagagggagcggcactctggcatgtcgatggggggatcgtccatgggaagtcagtgg
gtggacggcgtgggcatctggggaggacccggaggcatggatggaaaaggcggaagcggc
gggatgggcatgtgggaagaggccgtcaagaaccaggccggccttcggggcaacggcggc
aacaacctgggcttaaagaacagccgcagcagcccttcactcaggttcgagcagtacatg
atgcgccggaagcggacggatgaggaggagaatctgctgaagctgttgcagggcatgaag
ccccaggacggcttcaccacctggtgcgagcagatgctgcacgcgctcaacacctctgcc
agcaactcctcttctctggatgttgctacaattgtggcctacctgaaggaggtggagtct
ccctacgcagtgtcggagttcatccggtcctacctgggggacacggtggaagccaaagag
ttcgccaaacagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcag
cagcagctatcgaaggaagtggctgggctgaactcgatgcgaggcatgaacgcgagcgcc
ctgcagtccatgttccaggccggccacatgggcaagactggtctctatgacaacccagga
gggaaaatgaaaaagaaacagcccatgatgctgcactctgatcccagcatcttaggctac
tcattccacagtacagcagagtgtttgagcctgaatgagatggagatggtggaggattac
tga
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