Syngnathoides biaculeatus (alligator pipefish): 133494809
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Entry
133494809 CDS
T09681
Symbol
trim2b
Name
(RefSeq) tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133494809 (trim2b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133494809 (trim2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
TEN_NHL
zf-B_box
Beta-prop_IFT122_1st
Mala_s_1-like
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
133494809
NCBI-ProteinID:
XP_061664958
LinkDB
All DBs
Position
21:complement(3583781..3591705)
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AA seq
666 aa
AA seq
DB search
MAAHQHSPDSSSEECTVLEAPPPKDTCPQHGGKVCDYCWACLRPLCAECASEHGEHPLAP
LGDALEQHRRTLEAWMRAAHDRLPQISAAAVVVGEMVQQLTSQRAAIEEDIQSSFEDLHK
QLDVRKSVLLMELEVTFGLKHKVLQSQLENLLQGEGVASSACARAEEVLATEACVASLEV
ELDLKEKLEELARRGLSCQPEENDQLDLILEADGLRKWIHNLGTIVTTSAVASQSEAMGA
GLEQCTVGLPSSVTIVTRDKSGGACKSGNAILSAEVFTPDGSIVDGEIVDHKNGTYEFVY
VLPKEGDFSLALRLYDQHIKGSPFKLSVATPQVSPSTTTPSNSAANATPSTGSSEGAKRR
GKSPGQKKKGSKRASSALGTPRRKTQNPIEDDLIFRIGTKGRNKGEFTNLQGIAAAADSG
NILIADSNNQCVQVFSSQGEFKSRFGVRGRSPGQLQRPTGVAVHPSGDIIVADYDNKWVS
IFSSDGKFKAKLGSGRLMGPKGVSVDHEGHVIVVDNKACTVFIFQLSGKLVTKFGSRGNG
DKQFAGPHFAAVNKNNEIIVTDFHNHSVKVFTPEGELLLKFGSNGEGNGQFNAPTGVAVD
ANGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTRDGHVVVADSGNHCFK
VYRYLQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccatcaacactctccggacagcagcagtgaggagtgcactgtgctggaggct
ccgccccccaaggacacctgcccgcaacatggcggcaaggtgtgcgactactgttgggcg
tgcctgcgtccgctgtgcgccgagtgcgcaagcgagcacggcgagcacccgttggcgcct
cttggcgacgccttggaacagcaccggcgaactttggaggcgtggatgagggcggctcac
gacagactgccgcagatttcggccgccgccgtggtggtgggagagatggtccagcagctg
accagtcagagggcggccatcgaggaagacatccagtccagcttcgaggaccttcacaag
cagctggacgtgaggaagagcgttcttctcatggagctggaggtcaccttcggcctcaag
cacaaggtcctccagtctcagttggagaacctgctgcagggcgagggcgtcgcgtcgtct
gcctgcgcccgtgcggaggaggtcctggcgaccgaggcctgtgtcgcaagtctggaagtg
gagctggacctcaaggagaagctggaggagctggccaggcggggcctgtcgtgccagccg
gaggagaacgaccagctggacctgatcctggaggcggacggactacgaaagtggatccac
aacctcggcaccattgtgaccaccagcgccgtggcaagccagagcgaggccatgggcgct
ggcctggagcagtgcaccgtgggactcccttcctctgtcaccatcgttaccagagacaag
tccgggggggcctgcaagagcggaaacgccatcctgtccgccgaggtgttcacgcccgac
ggcagcatcgtggacggcgagatcgtggaccacaagaacggaacgtacgagtttgtctac
gtgctgcccaaagagggcgacttctcactggcactgcgtctgtacgaccagcacattaaa
ggaagtcccttcaaactgagcgtcgccacgccgcaggtgtcgccctccaccaccacgccc
tccaactctgcagccaacgccacgccgtccacgggctcctcagagggcgccaagagacgg
ggcaagtcccccggccagaagaagaagggctccaagagggccagcagcgccctgggaacg
ccacgtcgcaaaacccagaaccccatcgaggacgacctcatctttcggatcggaaccaag
ggccgcaacaaaggcgagttcaccaaccttcaagggatcgccgccgccgccgacagcggg
aacatcctgatcgccgacagcaacaaccagtgtgtgcaggtcttctccagccagggagaa
ttcaagagtcgatttggggtgcgcgggcggtccccggggcaactgcagcggcccacgggt
gtggcggtgcaccccagcggtgacatcatcgtcgccgactacgacaacaagtgggtcagc
atcttttccagcgacggcaagttcaaggccaagctgggttcgggcaggctgatgggaccc
aagggcgtgtcagtggatcacgagggtcacgtgatcgtagtggacaacaaagcgtgcacg
gtcttcatcttccagctgagcggaaagctcgtcaccaagttcgggagccgcggcaatggc
gacaagcagtttgcgggtccgcactttgccgctgtcaacaagaacaacgagatcatcgtg
accgacttccacaaccactctgtcaaggtgttcacgcccgaaggagagctgctcctcaag
ttcggctccaacggcgaaggcaacggacagttcaacgccccgaccggtgtggccgtggac
gcaaacgggaacatcatcgtggctgactgggggaacagccgcatccaggtgttcgacggc
agcggttctttcctgtcctacatcaacacgtcggccgaccccttgtacgggccgcagggg
ttggccctgacccgggacggacacgtggtggtggccgactcgggaaaccactgcttcaaa
gtttatcgctacctgcaatga
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