Syngnathoides biaculeatus (alligator pipefish): 133494821
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Entry
133494821 CDS
T09681
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04141
Protein processing in endoplasmic reticulum
sbia04210
Apoptosis
sbia04217
Necroptosis
sbia04218
Cellular senescence
sbia04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133494821 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133494821 (capn1)
04217 Necroptosis
133494821 (capn1)
04218 Cellular senescence
133494821 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133494821 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133494821 (capn1)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
133494821 (capn1)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C2: calpain family
133494821 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
zf-MYST
Motif
Other DBs
NCBI-GeneID:
133494821
NCBI-ProteinID:
XP_061664982
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All DBs
Position
21:3635802..3643059
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AA seq
705 aa
AA seq
DB search
MVEPVCATGAAAQLRNLRDRQEGLGLNDNAVKFLGQDYESLRARCLQSGKLFEDSLFPCA
ASSLGFNELGPRSSKTYGVRWMRPTELCKRPAFIVDGATRTDICQGALGDCWLLAAIASL
TLNDNLLHRVVPHGQSFEQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEGG
EFWSALIEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELSKAPSDLFGIMGRAIER
GSLLGCSIDITSSRDMEAVTFKKLVKGHAYSVTGLEEVVFRGNLTKLVRIRNPWGEVEWT
GAWSDNSREWDSVDRGVRARLQNRSEDGEFWLSFSDFLREFSRLEICNLTADALGSSQMK
TWSSSLYPGEWRRGSTAGGCRNYPATFWLNPQFKLLLQHPDAPGMSDCSFLVALMQKDRR
KKRREGKDMETIGFAVYEVPGEAKGQTRVHLKQNFFLTHGSSARSELFINLREVSSRLRL
PAGEYVIVPSTFEPHKEADFVLRVFSEKPADSEELDDDVVAELPTENYLDESQIDAGFKS
LFRQLAGPDMEISINDLQTILNRIIAKHKDLKADGFTKAACRSMLNLMDADGSGKLGLVE
FHVLWEKIKRYLTIFRNFDLDKSGSMSSYEMRMALESAGFKLTNHLFQLIILRYTEADMA
VDFDNFVTCLVRLESMFKTFKIMDTDADGFIALNFSQWLSLTMFA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcccgtatgtgccacgggtgcggcggcgcagctgcgtaatctgagggaccgg
caggaaggtctgggcctcaacgacaacgccgtcaagttcctgggtcaggactacgagagc
ttgcgggcgcgatgcctccagagcgggaagctctttgaggacagcctgttcccctgcgcc
gcgtcctccctgggcttcaacgagctcggaccgaggtcgtccaagacgtacggcgtgcgt
tggatgaggcccacggagttgtgcaagcgtcctgctttcatcgtggacggagcgacgcgc
accgacatctgccagggagctctgggtgactgctggctgctggcggccatcgcctcgctg
accttaaacgacaacctcctgcaccgagtggtcccgcacggacagagcttcgagcaggga
tacgcgggaatcttccactttcagttctggcagttcggcgagtgggtggaggtggtgatc
gacgaccgtctgcccgtgaaggacggcaagctgctgttcgtccactcggcggagggcggc
gagttctggagcgcgctgattgagaaggcgtacgccaagttgaacgggtgctacgaggcg
ctgtcggggggaagcacgtccgaaggcttcgaggacttcacgggcggcgtgacggaaatg
ttcgagctgagcaaggcgccctccgacctcttcggcatcatgggccgcgccatcgagaga
ggttcgctgctcggctgctccattgacatcaccagctccagagacatggaggcggtcacc
ttcaagaagctggtcaagggccacgcgtactccgtcacgggcttggaggaggtggtcttc
cgcggaaacctgaccaagctggtccgcatcaggaacccgtggggggaggtggagtggacc
ggggcttggagcgacaattctcgagaatgggacagcgtggaccgcggcgttcgcgctcgc
ctacagaaccggagcgaggacggcgaattctggttgtccttcagcgacttcctacgcgag
ttcagccgcctggaaatctgcaacctgactgccgacgccctcgggagcagccagatgaag
acgtggagctcgtcgctgtatcccggcgagtggagacggggcagtacggccggaggctgc
cggaactatccggcgaccttttggctgaatccgcagttcaagttgttgctgcagcacccc
gacgcccccggcatgtcggactgcagcttcctggtggcgctcatgcagaaggaccgcagg
aagaagcggcgggaagggaaagacatggaaaccatcggcttcgccgtctacgaggttccc
ggtgaggctaaagggcagacgcgggtccacttgaagcagaacttcttcctgacgcacggc
tctagcgcgcgctccgaactcttcatcaacttgagggaggtcagctcgcgtctgcgactc
ccggccggcgagtacgtcatcgtgccgtccacctttgagccccacaaggaggccgacttc
gtcctgcgggttttctccgagaaacccgccgactccgaggagctggacgacgacgtggtg
gcggagcttccgaccgagaactacttggacgagagtcagatcgatgccggcttcaagagt
ctcttccgacagctggccggtccggacatggagatcagcatcaatgacctgcagaccatc
ctgaatcgcatcatcgccaagcacaaagacctcaaggcggacggcttcaccaaagcggcg
tgtcgcagcatgctcaacctcatggatgcagacggcagcgggaagctgggcctggtggag
ttccacgtgctgtgggagaagattaaacgctacctgaccatattcaggaactttgacctg
gacaagtcaggaagcatgagctcctacgagatgaggatggcgctggagtccgccggcttc
aagctgaccaatcacctgttccagctcatcatcctgcgctacaccgaggcggacatggct
gtcgactttgacaactttgtcacgtgtctggtccgcctggagtcaatgttcaaaaccttc
aagatcatggacacagacgcagacggcttcatcgcgctcaacttctcgcagtggctctcc
cttaccatgttcgcctag
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