Syngnathoides biaculeatus (alligator pipefish): 133494855
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Entry
133494855 CDS
T09681
Name
(RefSeq) neurexin-1-like isoform X1
KO
K07377
neurexin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133494855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133494855
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
133494855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
133494855
NCBI-ProteinID:
XP_061665046
LinkDB
All DBs
Position
21:2641747..2782512
Genome browser
AA seq
1677 aa
AA seq
DB search
MIRGLRFPCWPLLPLAFVSLLSRARALEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPAILHTETWVNDDRWHMVLLTRNYRE
TLLMVDGETKVAEVKSKRKEMAVVSDLYAGGIPPDVRLSALTSSTVKYEPPFMGLISNLK
VGETPPTLLNSHGIQSDLEYLCTKQNPCFNGGFCSIQYGEVQCDCSHTRFKGKYCKEEEF
VTRGLAHLTLNDQGDSSQSGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQRN
GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQ
HAGIGHAMVNKLHYMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVS
NNFMGCLKDVVYKNNDFKLELSRLAIQRDPKITLNGDLVFRCEDVAALDPVTFETPESFI
SLPKWNTKKTGSVSFDFRTTEPSGLLLFSHGRPQAPKEQKPGRELKTDYFALELLDGYLY
LLIDMGSGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDS
DMYLGGLPESKTELVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSALGVSSF
CTRELQKRCSSTPCGNGGLCKEGWNRYICDCTSTGFLGPNCEIEATVLSYDGSMYLKILV
PVTMHTEAEDVALRFMSQRAYGLLVASTSKESADTLRLELDGGRVRLTVNLDCIRIDCSL
SKGPETLFAGQKLNDNEWHTVKVVRRGKSLQLSVDNVTVEGQMTGAHTRLEFHNIETGIM
TERRFISVVPSNFIGHLQGLSFNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTK
GSYLALATLQAYASMHLFFQFKTTTADGLVLFNSGDGSDFIVVELVKGFVHYVFDLGNGP
SLMKGNSDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVI
KNMYSNLPKLIASRDGYQGCLASVDLNGRLPDMVADALHRVGQVDRGCDGPSTTCTEDSC
YHQGVCLQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRL
AVGFSTQLKEAILVRVESAKGLGDYLELHVERGRIGVIFNVGTDDIVIEESAVMVSDGKY
HVVRFTRSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQ
LTIFNSQAFIKIGGGEKGRHFQGQISGLYYNGLQVLKLASEGDPNVQTQGSLRLVGDAPS
VLAADTTSTTPLADMSTTIMETTTTMATTTTRKQRSPTIRDSVTQNADEILVASAECPSD
DEDLEECEPGNGGELVVPVITVDSIDPPSIATRYPVIPPPPTTYRPSLTLLETTRESLPL
PNVRPPCPADQEDCEPYAEVSAYGSGEMTESDDEDYYKNSPLVTDRSVLPPAQAPAQTPR
DGHFSRHPPASSAPTADPDRLSPRVEGAGGGNSNNIPAGKMNTRDRVLLPPARPSPDPGH
RRASGITYPSNFPRVPTPDPSSPERGLPGTVEVQQSSSTTGMVVGIVAAAALCILILLYA
MYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEKAPSAAKTAPKNKKNKDKEYYV
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgattcggggcttaagattcccgtgctggcccttgttgccgctggccttcgtcagcctg
ctgtccagggccagggcgctggagtttgggggagcgcccggccaatgggcccgctacggg
cgctgggaggctggctcggtaggagagttgagcttcagcctgaagaccaacatcagcaaa
gcgttggtactttacctggatgacggcggcaactgcgatttcctggaactgctgatcgcc
ggtgggcgcctccagctccgtttcgccatccactgcgccgagccggccattttgcacaca
gagacgtgggtgaacgatgaccgctggcacatggtcttgctcacccgcaattaccgggag
actctcctaatggtggacggtgagaccaaagtggctgaggtcaagtccaagcggaaggaa
atggcggtggtcagtgacttgtatgcgggcggaataccgcccgacgtacgcctctctgcg
ctcacctccagcacggtaaagtatgagccccccttcatgggcttgatctccaacctgaag
gtgggagagaccccacctaccttgctgaacagccacggcatccagagcgacctggagtac
ctgtgcaccaaacagaacccatgcttcaacggaggcttttgctccatccagtatggagag
gtccagtgcgactgcagccacacccgcttcaaggggaagtactgcaaggaagaggaattt
gtaacgagaggtctggcgcatctgacgttaaacgaccaaggtgactcatctcaaagcggg
aaggaagagtccgtcgcgaccttcaagggcaacgagttcttctgctacgacctgtcgctg
acgcccatccagagcagcaccgacgagatcacgctgtccttccggacgctgcagcgcaac
ggcctcatgctgcacaccggcaagtcggccgactacgtcaacctgtcgctgaagagcggc
gccgtctggctggtcatcaacctgggctccggggccttcgaggccctggtggagcccgtc
aacggcaagttcaacgacaacgcctggcacgacgtgcgcgtcacccgcaacctgcgccag
cacgcaggcatcggacacgctatggtaaacaaactgcattatatggtaaccatctcagtg
gacggcatcctgaccacgaccggctacacgcaggaggactacaccatgctgggctccgac
gacttcttctacatcggcgggagccccaacaccgccgacctgccgggctcgcccgtcagc
aacaacttcatgggctgcctcaaggacgtggtgtacaagaacaacgacttcaagctggag
ctctcccgcttggccatccagcgcgacccgaaaatcaccctgaacggcgacctggtgttc
cgctgcgaggacgtggcggctctggacccggtcaccttcgagacccccgagtccttcatc
tcgttgcccaagtggaacaccaagaagacgggctccgtctctttcgacttccgcaccacc
gagcccagcggcctcctgctgttcagccacggccggcctcaggcccccaaggagcagaag
cccggccgggagctcaagaccgattatttcgccttggagctcctggacggttatctgtac
ttgctgatcgacatgggttcaggcaaaaccaagctgaaggccagcaacaagaaggtcaac
gacggcgaatggtgtcacgtggacttccagcgggagggaaggaaggggtccatctcggtc
aacagccgcagtatgcccttcagctccccggagggcagcgagatcctcgacctggacagc
gacatgtacctgggcggcctccccgagtccaagacggagctggtcctgccgcccgaggtg
tggacggcgctgctcaactacggctacgtgggctgcgtccgcgacctcttcatcgacggc
aagagccgcgacgtccgccgcctggccgagatccagagcgcgctgggcgtgagcagcttc
tgcacgcgcgagctgcaaaaacgctgcagcagcacgccctgcggcaacggcggcttgtgc
aaagagggctggaaccgctacatatgcgactgcaccagcacgggattcctgggccccaac
tgcgagatagaggcgacggtgctgagctacgacggcagcatgtacctgaagatcctcgtg
cccgtcaccatgcacacggaggccgaggacgtggcgctgcgcttcatgtcccagcgggcc
tacggcctgctggtggccagcacgtccaaggagtcggccgacacgctgcggctggagctg
gacggggggcgggtcaggctcaccgtcaacctcgattgtatcaggatagactgtagcctc
agcaaaggacccgagacactgtttgcgggccagaaactgaacgacaacgagtggcatacg
gtgaaggtggtgcgaagaggcaagagcctgcagctctcagtggacaacgtcacagtggaa
ggccagatgactggcgcccacactcgcctggagttccacaacatcgagacgggcatcatg
accgagcgccgcttcatctcggtggtgccgtccaacttcatcggccacctccagggcctc
tccttcaacggcgtgccctacctggaccagtgcaagaacggcgacatctcctactgcgag
ctcaacgcccgcttcggcatgcgccacatcatcgccgacccggtgacgttccggaccaaa
ggcagctacctggcgctggccaccctgcaagcgtacgcctccatgcacctgtttttccag
ttcaaaaccaccacagccgacggcctggtgctcttcaactctggcgatgggagcgacttc
attgttgtggaactggtcaaagggttcgtccactacgtctttgaccttggcaacggcccg
tcgctcatgaagggcaactcggacaagccgctcaacgacaaccagtggcacaacgtggtg
gtgtcccgggacgccaacaacgtgcatacgctcaagatcgactcgcgcaccgtgactcag
cactccaacggagcccggaacctggacctcaaaggagagctgtacatcggtggcgtgatc
aagaacatgtacagtaatctgcccaagctgattgcgtcccgggacggctaccaaggctgc
ctggcctccgtggacctgaacgggagactccctgacatggttgcagacgccctccaccgg
gtgggccaggtggaccgaggctgcgacggaccgagtaccacctgtacggaggactcctgc
taccatcaaggggtttgtctccagcaatgggagggcttcacctgcgactgcaccatgacg
tcctacggaggctcattttgcaatgaccctgggacaacgtacatctttggcagaggcggg
gccctcatcacgtacacgtggccgcccaacgaccggccgagcacacgggcggaccggctg
gcggtgggcttcagcacgcagctgaaggaggccatcttggtcagggtggaaagcgccaag
ggactgggcgactacctggagctccacgtagagagaggaaggatcggcgtgatcttcaac
gtggggacggacgacatcgtcatcgaggagagcgcggtgatggtgagcgacggcaaatac
cacgtggtgcgcttcacgcgcagcggtggcaacgccacgctgcaggtggacaaccagccc
gtcatcgagcgcttcccctcagggaactttgataatgagcgcctggctattgctagacaa
agaatcccataccgcctcggtcgggtagttgacgagtggctactcgacaaaggtcgccag
ctgaccatttttaacagccaggcgttcatcaaaattggcggcggggagaaaggccgccac
ttccagggccagatctcgggcctgtactacaacggcctgcaggtgctcaaattggcctcc
gagggcgaccccaacgtgcagacgcagggaagcctgcgcttggtgggcgacgcgccctcg
gtgctcgccgccgacaccacttccaccacccccctggccgacatgtccaccaccatcatg
gagaccaccaccaccatggccaccaccaccacccgcaaacagcgctcgcccaccatcagg
gacagcgtcacacagaatgcggatgaaattttggtagcgtcagcagagtgtccgagcgat
gacgaagatttggaggagtgtgagcccggaaatggaggtgaactagtcgtgcccgttata
acggtggactcgatagaccccccctccatcgccacccgctacccggtaatccctccgccc
ccgactacctatcgcccgtccctcaccttactcgaaaccaccagagagtcgctccccttg
cccaacgtgcggcccccttgccccgccgaccaggaggactgcgagccgtacgcggaggta
tccgcgtacggctcgggcgagatgaccgagtcggacgacgaggactattacaaaaactcc
cccctggttaccgaccgcagcgtcctccccccagcccaggccccggcccaaaccccccga
gacggccatttctcacgccacccgcccgcgtcctccgcccccacggccgacccggatcgg
ctcagcccccgcgtcgagggagcgggcggcggcaatagcaacaacatcccggccggcaaa
atgaacactcgggatcgggtgctgttgccgccggcccgcccctcgccggaccccggccac
cgcagagcgtcgggaataacctacccttccaatttcccccgcgttcccactccagacccc
tcgtcccccgagagaggtcttccgggcacggtggaggtgcagcagtcgagcagcaccacg
gggatggtggtgggcatcgtggcggccgccgccctctgcatcctcatcctgctctacgcc
atgtacaagtatcgcaacagagacgagggctcctaccaggtggaccagagccgcaactac
ataagcaactcggccacgcagagcaacggcaccctggtgaaggagaaggcgccgagcgct
gccaagacggcccccaagaacaagaagaacaaagacaaggagtactacgtttga
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