Syngnathoides biaculeatus (alligator pipefish): 133494874
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Entry
133494874 CDS
T09681
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133494874 (sorcs2)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Others
Others
133494874 (sorcs2)
BRITE hierarchy
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
Mfa1
DUF6786
Motif
Other DBs
NCBI-GeneID:
133494874
NCBI-ProteinID:
XP_061665098
LinkDB
All DBs
Position
21:complement(6066186..6122453)
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AA seq
1198 aa
AA seq
DB search
MEVYADDLAPRAGSGPPGLDFDTCDVKNSNAKADVSIFAQPVSCSISSPKNMPAPAFPAS
VHLCVLLLTVSAAAAATAMPGPARCERADDRGPDAGPGGRAGGSPTDGGEHAEGSPRLRR
ALSRGKQMSLQSSSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADSTKVLESSLWRS
TDYGTTYAKLNLMPGTTIVVSSFYICPTNKKKVVLVGSSVNERDQMLFISTDEGQSFQRQ
SVLFSPDVLIFHPKEEDKLLACCKDGRLFASTDLGRKWTLLQERVTKDRVFWSVADVDVD
PDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGKIDHNSLSVQGDYIFVKVTTGNRT
KHYVSYRRSEFVQMKFPKYALPKDVHIVSTDEQQVFLALQEWHQTDTYNLYQSDPRGVYY
SVVLENVRSTRQPEDVVLIDILEVRGIKGVFLANQRVDGKVRTVITYNKGRDWQPLTPPA
ADMNGKTVTCKAPDCHLHLHLRWADNPYVSGTVHTKDSAPGLIMGAGNLGSKLVEYKEEM
YITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSIDEGRTWTVHNFTST
SVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPRQCGEADYESWQLTDLQG
EKCIMGQEQTFRRRKDTAFCVKGKSYTSALGTKPCHCTERDFNCDYGFERSHAASGRCFA
DFWHRPDSPPENCQPGRTFETSTGYRKVVSNVCEGGLNKEQSAKQRNCPLLPPRGLQVGI
KGQMLAVAPGDDVTFIVHQEEGDTSSTKYQVDLGDGFRAIYQNLTVTDEPIQHRYDNPGV
YKVSVQAENAAGRDEASMYIQVTAPLQEVHLEVIPIAGRNRQVNLTAVVLPAEANLTVFY
WWIGDSLQPTLTLRNSMLTSFPEAGRTSVSVQASNGRSMVQDTRTVRVYENFHVIPLSFS
GHLDRLNPNIPEWREDVGLVVTRTLAKVTGVPEESLVTVVKAGLPTAADLYVLPVESTPA
KRSVFQDKRISTIIQAFKDNNVSFVVRGGLRVLVLPADPNAGLGLNAVDATEREIGHGPA
GGPGVWAVAVIFLLGIVAAASFILYKFKSPWLRTEEVYPPLFFRKLPGGRSVYAQMHNEK
EQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNARGNHSGVVLSVNSRELHSYLSS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctacgcggacgatttggctccgcgggccggatctggccccccgggccttgat
tttgacacctgcgatgtaaagaattcaaacgcaaaagcggacgtctccattttcgctcag
ccagtctcctgctccatctccagccccaaaaacatgcccgcaccggcgttcccagcctcc
gtgcatctctgcgtcttgctcttaaccgtctcggcggcggcggcggcgaccgcgatgccg
ggacccgcgcgctgcgagcgtgcggacgaccgcgggccggacgcgggacccggaggacgc
gcgggaggctccccgacggacggaggcgagcacgccgagggctccccccgcctcaggaga
gcgctgtcccggggaaaacaaatgtccctgcaaagcagctccttcgtgctcaaaggagac
gccacgcacaaccaggcgatggtccactggacgggggagaacagcagcgtcattctcatt
ctgaccaagtactaccacgccgattccaccaaggtgctggagagctctctgtggaggtcc
accgactacggcacaacgtacgcgaaactcaacctgatgccggggaccaccatcgtggtg
agcagcttctacatctgcccgaccaacaagaagaaggtggttctggtgggctcctccgtg
aacgaacgggaccaaatgctgttcatcagcaccgacgagggccagtccttccagcggcag
agcgtcctcttcagcccggacgtgctcatcttccaccccaaggaggaggacaagctgctg
gcctgctgcaaagacggacggctgtttgcctccaccgatttgggccgcaagtggactttg
cttcaggagcgggtgaccaaggaccgagtgttctggtctgtggcagatgtggatgtggac
ccagatctggtgcacatggagatgcaggacacaagtggaggttacctgtacgtcacctgt
ctcatccagaactgctccgacaaaatggtgaccgctcagttcttgggaaaaatcgaccac
aattctctgtcggtgcagggtgactacatttttgtcaaggtgaccacagggaatcgcacc
aagcactacgtgtcgtatcgacgcagcgaatttgtccagatgaagtttcccaagtatgcc
ttgccaaaggatgttcacatcgtcagcacggacgagcagcaggtcttcctggcgctgcag
gagtggcaccagacggacacgtacaacttgtaccagtcggacccgcggggggtgtactac
tccgtggtcctggagaacgtccggagcaccaggcagcccgaagacgtggtcctcattgac
atcctggaggtgcgtgggatcaaaggggtcttcctggccaatcagcgggtggacggcaag
gtgaggaccgtcatcacctacaacaaaggacgagactggcagcccctgaccccgcccgcc
gccgacatgaacggcaaaaccgtcacctgcaaggcgccggactgccacctccacctgcac
ctgcgctgggcagacaacccttacgtgtccggtaccgtccacaccaaagattctgctccg
ggtctcatcatgggagcaggtaaccttggctccaagctggtggagtacaaggaagaaatg
tacatcacgtctgactgcgggaagacatggagacaggttttcgaggaggagcatcacatc
ctctacctcgaccacggcggggtgattgtggccatcaaggacacttcgattccactcaaa
atactcaagttcagtatcgacgaaggacgcacgtggacagtccacaacttcaccagcacg
tccgtcttcgtcgacgggctcctgagcgagccgggcgacgagaccctggtgatgacagtg
ttcggccacatcagctacaggtccgactgggaactggtcaaagtggacttccggcagtct
ttccctcgccagtgtggagaggccgactacgagtcgtggcagcttacagacctgcagggt
gaaaagtgcatcatgggccaggagcagacgttccggaggaggaaggacactgcgttctgt
gtcaaagggaagagctacacctcggctctcgggactaagccgtgccactgcaccgagcgg
gacttcaactgcgactacggtttcgagcgatcccacgcggcgagcggacgatgctttgct
gacttttggcaccgtccggactcgccgccagaaaactgccaaccgggacgaaccttcgag
acaagcacagggtaccgcaaggtggtctcaaacgtgtgtgaggggggcttgaacaaggag
caaagtgccaaacaaagaaactgccctctactgccccctagaggactgcaagtgggcatc
aaagggcagatgctggccgtggcccccggtgatgatgtcacgttcatcgtgcaccaggag
gagggcgacacgagcagcaccaagtaccaagtggacctgggcgacggcttccgggccatt
taccaaaacctgacggtgacggatgaacccatccagcaccgctacgacaatccgggagtt
tacaaagtttccgtgcaggcggagaacgcggcgggtcgcgacgaggccagcatgtacatc
caggtcacagcacctctgcaagaggttcacctggaagtgatccccatcgccgggagaaac
cggcaggtcaacctgacggccgtcgtccttcccgccgaggccaacctgaccgtcttctac
tggtggatcggagacagcctgcagccgacgttgacgctgcgcaacagcatgctgaccagt
ttcccagaggcgggccggacttcagtgagcgtccaagcctccaacgggaggtccatggtg
caggacaccaggacggtccgcgtctacgaaaacttccacgtcatccccctgagcttcagc
ggccacctggaccgcctgaatcccaacatcccggagtggcgagaggacgtgggtctggtc
gtcaccaggacactcgccaaggtcacaggtgtcccagaggagtccctggttactgtggtg
aaggcgggcctccccaccgccgccgacctctacgtcctccctgtggagagcaccccagcg
aagagaagcgtctttcaggataagcgcatctcaaccatcatacaagccttcaaagacaac
aacgtcagctttgtggtgcgaggcggtctgcgggttctggtgctgccagcggacccaaac
gcaggcctcggtctaaatgctgttgacgccacggaaagagaaattggtcacggacctgcc
ggcggtcccggcgtctgggccgtcgccgtcatttttctgctcggcatcgtggccgcggcc
tcttttatcctctacaagttcaagagtccttggctcaggactgaggaggtgtatcccccg
ctgtttttcaggaagctgccgggcggccgcagcgtctacgcccagatgcacaacgagaag
gagcaggagatgaccagtcccgtcaaccacagcgaggacacgcagcacatcatccagggc
gaggagttcatcgacgacgacctggactcgcagacgctaggtaacgccagaggcaaccat
tcaggtgtggtcctgagtgtcaactccagagaactccacagttacctgagcagctga
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