Syngnathoides biaculeatus (alligator pipefish): 133494934
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Entry
133494934 CDS
T09681
Symbol
sf1
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133494934 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133494934 (sf1)
Spliceosome [BR:
sbia03041
]
Complex A
Other components
Complex A specific factors
133494934 (sf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
133494934
NCBI-ProteinID:
XP_061665218
LinkDB
All DBs
Position
21:4315057..4324128
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AA seq
669 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGMMPSPGPPASFPPLQGFQPPMPSPAFAQ
AHQFSAPSGFSTQPPQQLQQPVGQDFSQKKQRKKSRWSSETPDQKTVIPGMPTVIPPGLT
RDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKI
EEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTLK
NIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMDNVKKAVEQIRNI
LKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNTEPRSITNTTLCTKCGGA
GHISSDCKYTSTFAAQRATGGEPPQSAQDKARMDKEYLSLMAELGEAPLPASSGGHAGPQ
GGPPRTPAPSNSQAPPNRPPWMTSAQNDNRSFHGMHGGGPHSFPPPMPSMGGPPMPPNPN
GMPPPWMQPPPPPMGQGPGHHGHPMGMMPPPMGMMPPPPPPPNSQPPPPPPSGPLPPWQQ
QAPPPPTSSMATSTPLPWQQNTPTTSSPGTGALPPWQQPQQPAVSAPQPPPPMGAPSMVP
PPPGVQPPLPPGAPPPPPPPPPGSASMMYAPPPPPPPMDPSNFVMMGMGVPGMPPFGMPP
APPPPPPQN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggcgctaacgccactcctttaggaaagttgcaccccagcatcggcgcgaag
cgaggcttcgacgcggggcccggcgccggcaacggcatgatgcccagcccggggcctcct
gcgtcctttccgccgttacaagggttccaaccgccgatgccctctccggctttcgcacag
gcgcaccagttcagcgcgccgagcgggttttcgacgcagcctccccagcaactccagcaa
cccgtcggacaagatttcagccaaaagaaacaaaggaagaagagtcgttggagtagtgag
acacccgaccagaagacggtcataccgggtatgcccaccgtcatcccccctggtctgacc
cgcgaccaagagagagcctatatagtccaactgcagatcgaagacctgacacgtaaactg
cgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctcgccggagccc
atctacaacagcgagggcaagaggctgaacacccgggaatatcgcacgcgcaagaagatc
gaggaagagcgccactccctcatcaccgaaatggtcggactcaaccccgacttcaaaccg
ccggctgattataaacctccggccaccagagttaacgacaaagtgatgattcctcaagac
gaataccccgagatcaactttgtcggtctgcttattggaccgcgtggtaacacgttgaag
aacatagagaaagaatgctgcgccaaaatcatgatccgcggcaaaggctcggtcaaggag
ggcaaggtgggcagaaaggacggccagatgctgcccggcgaggacgaacctctgcacgct
ctggtcacggcgaacacgatggacaacgtcaagaaagccgtggagcagatccgcaacatc
ctcaagcaaggcatcgagacgcccgaggaccagaacgacctgcgcaagatgcagctgaga
gagcttgcccggctcaatggaacgctgagggaagacgacaacaggattctgcgtccttgg
cagaacaccgagccccgcagcatcaccaataccaccctgtgtaccaagtgcggcggagca
ggccacatctcctccgattgcaagtataccagcaccttcgccgcccaaagagcaacggga
ggcgagccccctcagtcggcgcaggacaaggcacgcatggataaggagtacctgtcgctt
atggctgagctgggggaggccccgttgcctgcgtccagcgggggccacgccggcccgcag
ggaggaccaccccgaacccctgcgcccagcaacagccaagccccgccgaaccgcccccct
tggatgacttcggctcaaaacgacaacaggagcttccacggcatgcacggaggaggccct
cacagcttccctcccccgatgcccagcatgggaggcccgccgatgcccccgaaccccaac
ggcatgcctcctccgtggatgcagcctccccctccgcccatgggccagggcccaggacat
cacggacacccgatgggcatgatgccacccccgatgggcatgatgccccctccgccgcct
cctcccaacagtcagccgccgccgcctcccccttccggtcctctgccgccgtggcaacag
caggctccgcctccccccacgagcagcatggcaacgagcacgccgctgccgtggcaacaa
aatacccccaccacatccagtcctggcaccggcgctctccctccatggcaacagccgcag
cagcccgcagtttcggcgccccaacctccgccgccgatgggtgccccctccatggtaccc
cctccaccgggagtccagccgcccctgccccccggcgcgccccctcctcccccgccaccg
ccccctggctcggccagcatgatgtacgccccgccgccgcccccgccgccgatggaccct
tccaactttgtcatgatggggatgggggtgccgggcatgccgccgttcggcatgcccccg
gcacctccgcctcccccgcctcagaattaa
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