KEGG   Syngnathoides biaculeatus (alligator pipefish): 133494957
Entry
133494957         CDS       T09681                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04382  Cornified envelope formation
sbia04510  Focal adhesion
sbia04512  ECM-receptor interaction
sbia04518  Integrin signaling
sbia04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133494957 (col4a5)
   04518 Integrin signaling
    133494957 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133494957 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133494957 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    133494957 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbia04147]
    133494957 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:sbia00536]
    133494957 (col4a5)
Exosome [BR:sbia04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   133494957 (col4a5)
Glycosaminoglycan binding proteins [BR:sbia00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   133494957 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 133494957
NCBI-ProteinID: XP_061665254
LinkDB
Position
21:complement(6638213..6662440)
AA seq 1683 aa
MSKETKRLPQLAAALLLFVLCGVAVRPTDSAACHGCAGSKCDCSGVKGAKGDRGFPGLTG
QPGVPGFPGPEGAIGPRGEKGSDGPMGFAGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PRGTPGCNGTKGEIGFPGVSGIPGQQGLPGPPGLPGQKGDPGDVISTNRFGEKGAVGFPG
LPGVPGPPGPAGYQGPIGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGEPGLPGP
AGPPGQVGEQKRPSETEIQRGDKGDPGPLGPPGDPGYPGPPGTPGGQKGEKGEPGEAGKR
GKPGKDGDPGPPGFLGLKGEPGLPGSPGRDGERGMKGERGFPGAPGVVISGQTGAQVGPK
GEPGFPGSPGIKGERGPTGLTGPPGAPGIPGGGGGGSPGLPGFPGERGQKGDAGSPGLSL
PGPPGRPGGSGLPGQPGPPGPPGFSSGGQNCVAGEPGRPGLPGERGYSGEAGQKGEKGDT
CVNCFSGTTGIPGPPGPAGQPGFPGNPGSPGIKGERGFPGTPGPNGPPGQPGPQGSPGFP
GEKGDPGEAISGPGPRGEKGDTGFPGSPGLPGLDGRPGRDGQPGLPGPKGAPGSLQVRGE
RGSPGDPGPPGIPGDRGPPGPPGFGPPGSPGEKGIQGVSGRTGAPGNPGAKGEPGSTVAE
KGPPGARGQDGQPGLPGAPGNPGQPGQAGFPGSPGAKGDPGLPGIGLPGPPGPKGFAGIP
GQPGAPGGLGRPGVDGLPGQPGFPGAKGEPGFGLPGPPGFPGVPGAKGVTGPKGDPGFPG
APGQPGRPGFDGAPGSKGEPGTSGLPGSRGPPGPPTAGSRGPPGNPGLPGPMGPPGFPGG
NGAKGDPGPPGLDIPGLPGDRGSPGFPGSPGPIGTPGPPGGPGRDGLPGLPGAKGDIGPI
GSPGPAGGPGGPGGPGAPGLKGEPGFPGRDGVPGPSGAKGDRGSSGPQGPPGYSPPNSSS
KGDKGEPGLPGAPGIPGQKGIPGIPGDPGFPGSDGRPGLPGPSGQKGDPGIPGGPGAPGA
PGLKGGMGEMGFPGPSGQKGLPGQPGRPGSPGQPGGPGFPGAKGEPGSAGVGPPGPPGVK
GDPGQSGFPGAPGAKGTPGLPGLPGLPGGPGAKGDVGPPGFQGSPGTPGPKGLDGGPGGP
GLTGAPGRPGEPGRPGAPGFPGDKGQPGRDGIPGPAGVKGEPGPPGYGEPGPSGLPGLPG
AKGDPGPSGPSGSPGFPGPKGESGFPGLPGPPGSIGPPGPPGLALQGPKGLQGPPGPPGR
AGVPGPQGPRGAPGSGGVRGEKGIPGAAGQPGFPGQKGDPGVPGFSGPPGTPGVPGAKGD
IGLPGVPGFPGPKGDPGLPGASGLPGDPGDLGPPGPPGDPGVPRPPDLIKGERGPPGPLG
QPGAGGPPGSPGREGLQGQPGDPGDSGPEGPPGFSGPPGRKGDNGPAGQPGQRGYPGPPG
SDGPQGPPGLPGSGSAAHGFLITRHSQIQEVPLCPIGTNLIYDGYSLLYVQGNERAHGQD
LGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIKPFIS
RCSVCEAPAMVIAVHSQTIQIPNCPANWEALWIGYSFMMHTSAGAEGSGQALASPGSCLE
EFRSAPFIECHGRGTCNYYGNSYSFWLATVDEGEMFSKPQSETLKAGNLRTRVSRCVVCM
KKT
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgagcaaagaaaccaagaggctgccgcagctcgcggcggccctgctgctcttcgtcctg
tgcggcgtcgccgtgcggccgacggactctgcggcttgccacgggtgtgcaggttctaaa
tgcgactgcagtggagtcaaaggagcaaagggtgacaggggtttccctggtctcaccggc
caaccaggagtcccgggcttcccggggcctgaaggggcgatcggaccccggggagagaag
ggtagcgatggacctatgggcttcgctggcccaaaaggaataagaggacctcctggatta
ccaggattcccaggaacaccaggacttccaggtcttccagggcaggacggacctccaggt
ccaagaggaacgccaggttgcaatgggacaaaaggtgaaataggcttcccgggagtatcg
ggaatcccgggacagcaaggactgccgggtccacctggtcttcctggacagaagggcgat
cctggtgacgtgatctccactaatcgttttggagaaaaaggagctgtgggctttcctgga
ctgccaggggttcctggtcctccaggacctgctggataccaaggtccaattggccctcca
ggaccgagaggctacgagggtcgaccaggtcctccaggtcctcctggacctaagggaaac
atgggactaaacttccagggacccaaaggagagaagggtgagcctggtttacccggacct
gctgggcctccagggcaagtcggggagcagaaaaggccaagtgagacagagattcaaaga
ggagacaagggcgaccctggacctctgggccccccaggtgatcccgggtatccaggtccg
cctggtacacctggtggccaaaaaggagaaaagggagaaccaggagaggcaggcaaacgt
ggaaaaccaggcaaagatggtgacccaggtccaccgggctttcttggtctcaaaggagag
ccaggcctgccaggttctccgggcagggacggcgagagaggcatgaaaggtgaacgtgga
tttccaggtgctccaggagtggttattagcgggcagacaggagcacaagtgggtccaaaa
ggggaacccgggttccctggatcacctggcatcaaaggagaaagaggaccaacagggcta
acaggacctccaggagcaccaggaattccaggcggtggtggtggcgggtcacctggactt
ccgggcttccccggagagagaggtcaaaagggagacgcgggtagtccaggcctctctctc
ccaggtcctccggggcgccctggaggctctgggttgccaggacagccaggaccccctgga
cccccaggtttttcctctggtggacaaaactgtgtcgctggggagcccgggcgtcctggc
ctaccaggagagaggggttactcgggagaggcaggacagaaaggtgaaaagggggacacc
tgtgtcaattgctttagtggcaccactgggatccctgggcccccaggaccggcgggacaa
cctggattcccaggaaatccaggttccccaggtattaaaggagaaagaggattcccagga
acaccaggcccaaatggaccacctggtcagcccggtcctcaaggttctccaggattccca
ggagagaagggagacccaggtgaagccatctctggccctggtccgaggggtgagaagggg
gacactggattccctggatcgcctggtcttccaggtctagatgggcgtcccggtcgagat
ggacaacccggacttccagggcccaaaggagctcctggatctttgcaagtgagaggagag
cgagggagcccaggtgatccaggtccccctgggattccaggagatcggggtcctccaggc
cccccgggctttggacctcctggatctcccggagaaaagggtattcagggagtttcagga
aggactggagctcctggtaaccctggtgccaagggtgaaccaggctcgacagtggcagaa
aaaggcccgccaggagccagaggtcaggatggtcagccaggacttccaggtgcaccagga
aacccaggtcagcctggtcaggctggttttcctggatcaccgggagcaaagggtgaccct
ggactccctggtattggactgccaggaccacctggacccaaaggatttgctggtatccct
gggcaaccaggagctccgggaggactgggaagaccaggagtagacggccttccaggccaa
cctggattccccggggcaaaaggtgaacccggcttcggactccccggtcctccaggcttc
ccaggtgtacctggagctaaaggtgtcactggacccaagggagatcctggctttcctgga
gctcccggccaaccagggcgacccggatttgacggcgcaccaggctctaaaggtgaacca
ggaacatctggtctaccaggatcccgtggcccaccaggacccccgacggcaggctcacgc
ggccccccagggaaccctggactcccaggcccaatgggtccacctggattccctggagga
aatggagcaaaaggagacccagggccgccaggtttggatattccaggcctgcctggagat
agaggtagtcctggtttccctggttccccaggaccgattggaactccaggaccccctgga
ggacctggtcgggatggccttcctggactgccgggtgccaaaggagatataggtcctatt
ggatctcctggaccagctggaggacctggtggccccgggggaccaggtgctcccggactg
aaaggtgaacccgggttccctggtagggatggtgttcccggtccttctggagctaaagga
gaccgggggagcagtggcccacaaggacctcctggatacagcccaccgaacagttcctca
aagggtgacaaaggagaaccaggactaccaggagcaccaggaatcccaggccaaaaaggc
atccccggtatccctggtgaccctggatttccaggatcagatggacggcctggacttcct
ggtccatcaggacaaaagggagatcctggcattccaggaggacctggtgctcctggagct
cctggactaaaaggcggcatgggagaaatgggatttccaggaccgtcagggcagaagggt
ttgccgggacagccgggtcgacctggatctccaggacagcccggaggacctggtttccca
ggagccaaaggtgaaccgggttctgctggggttggaccacccgggccccctggagtcaag
ggtgatcctggacagtctggtttccctggagccccaggggctaaaggtactccaggatta
ccaggtctgccgggattacctggcggaccaggtgccaaaggcgatgtaggtccaccagga
ttccaagggtctcctggtactcctggtccaaagggtcttgacggcgggcctggtggccca
ggcctgaccggagctccaggtcgaccaggagagcctggccggccaggagcacctggtttt
ccaggggacaagggtcaaccgggtcgggacggaatccctggaccagctggcgttaaagga
gagccagggcctccaggctatggcgaaccaggaccctctggacttccaggattaccaggt
gccaagggagaccctggcccctctggcccatctggcagtcccggtttccctggtccaaaa
ggagagagtggtttccccggccttccaggccctccaggctctattggcccacctggacct
ccaggtctggctctacaaggtcccaaaggattgcaaggaccccctggaccaccaggaagg
gctggtgtgcctggcccacaaggtcctcgtggggccccaggaagtggtggcgtcaggggc
gagaaaggcattcccggcgctgctggtcagccaggcttccctggtcagaaaggagaccct
ggcgttccaggattctcaggtcctccgggcactcctggtgttcctggtgctaaaggagac
atcggactgcctggggttcccggattcccaggaccaaagggagacccaggacttcccggt
gcctctgggctacctggtgatcctggagatctcggacctccaggccctcctggtgaccct
ggtgttcctcggcctcccgatctgattaagggagagcgtggacctcccggtcctctgggc
cagcctggtgctgggggaccgccaggctcccctggacgtgaagggctccaaggtcagcca
ggtgacccaggggattctggcccagagggtccccccggtttcagcggccctcctggaagg
aagggagacaacggtcctgctggtcagcctggtcagcgtggctacccgggtcctcctggc
tctgacggtccacagggtcctcccggtcttccggggtcaggttcggcagcccacggcttc
ctcatcaccagacacagccagatccaggaagtgccgctctgtcccatcggaaccaacctc
atatacgacggctactccctgctgtacgtgcagggcaacgagagggctcacgggcaagac
cttggaacggcgggaagctgtctgcgccggttcagcaccatgcccttcatgttttgcaac
atcaacaatgtctgcaacttcgcctcccgtaacgactattcctactggctgtcgacaccc
gaacccatgcctatgtccatggcccccatcaccggcgagagcatcaagccttttatcagc
cgatgctcggtgtgtgaagctcccgccatggtgatcgcagtccacagtcaaaccatccag
attcccaactgccctgccaactgggaggctctgtggataggttactcttttatgatgcat
accagcgccggcgctgagggctccggccaggccctggcctctcccggttcttgtctggag
gagttccgcagcgctccctttatcgagtgccacggcagaggcacgtgcaactactacggc
aactcctacagcttctggctcgccactgtggatgaaggcgagatgttcagcaagccccag
tcggagacgctgaaggcaggcaacctgcggacccgcgtcagccgctgcgtggtctgcatg
aagaagacgtaa

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