Syngnathoides biaculeatus (alligator pipefish): 133494959
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Entry
133494959 CDS
T09681
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133494959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
PDZ_Tricorn
L27_1
Motif
Other DBs
NCBI-GeneID:
133494959
NCBI-ProteinID:
XP_061665255
LinkDB
All DBs
Position
21:363823..385701
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AA seq
1834 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQQLKD
QGCGIPVSETQHNGGHVASPDISAEEAKCDQLDQIVQTMAQGRYVAHVDLQKPAMGGLGF
SVVGLKSENRGELGIFVQEIQVGSVAHSDGKLKEADQILAINGQPLDQTVTHQQAIGILQ
RASERVQLIVARGPIPQLWQHVETIELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQD
GRLRSGDHILRIGDTDLYGMGSEQVAQVLRQCGNRVKLVITRGNVDENPSVSASAPPDKG
AEKDEEEGAFDVSLIKNTQGLGITIAGYVGDKNSEPSGIFVKSITKDSAVDQDGRIHVGD
QIVAVDGVNIQEYTNQQAVEVLRHTGQAVHLKLIRRGFRPDEIPPAVAPVVTVLPPSDAV
LNEPHTEGRTEADRDKTQTQTMNHGVTVAPVVDQRTDEEHGTTTTPAPFEEEELVKKWQE
ILGANNEVIVAQVEKFSESSGLGISLEANGGHHYVRSVLPEGPVGRCGKLFSGDELVEVN
GISLIGETHKEVVRILKELPLRVYMTCCRPAPRQQADVDASKPQTDASSDGSQLTQEQIN
LSGVDVVEAASDATPEVPASSLAMWELEIQNIELEKGAGGLGFSILDYQDPLDPAKTVIV
IRSLVPNGVAEQDGRLLPGDRLMFVNDTNLESASLEDAVQALKGAELGMVQIGVAKPLPV
DTSEVDQKALEHAYFGDEDTFQASMIALHGSCSDLDFLNASTPETSSYLDFVPASVTARL
GASDEDLTTTEQTTERSDSYGPFHDLQITPEVQPESEELVQCQVEEPFLGFEDEDAEAGA
GVGGHAATSGSNFERTITVVKGNSSLGMTVSATKDCLGVLIRSIIHGGSISRDGRLGAGD
LILAINGESTAKLSNVQARAMLRRHSLVGPDMGSACSPEDDLCPFYVITYVPAEYLEEYK
RSLERSDNDDDVFSGLPSAPAPKDVPALPEREDGEGEESVSYSNWNQPRLVELFRQPGKS
LGISIVGGRGMGSRLSNGEVMRGIFIKHILDDSPAGHNNTLKTGDRIVEVGGVDLRDASH
EEAVEAIRRAGNPVSFLVQSIIQKPRPSTSAESIEENAPSLPRDREDKEGDSHSRLVLRL
SPTNPFTPTPFKPKKRDAAKAVALALPVVPHPGETDTDTLTEIPADPANGEGDEPESSWG
AIFLHRRISENVVTRYGGLPGALHAIELEKGKTGLGLSLAGNRDRARMSVFVVGIDPAGA
AGADGRMLVGDELLEINGQVLYGHTHQNASAIIKNSPSKVKIIFIRNAEALEQMAVGPVR
EPEGDPAEPHAEEDFAVGEGTAEDEGTLREGCIEVVNGEPEVASLPDMIGPGQPETVTSH
SRSSSLSTLACDPATCPIIPGCETIIDVSKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGA
ASKDGRLWAGDQILEVNGIDLRAASHDEAINVLRQTPQRVQLTVYRDEAQYKEEDLWDSF
IVELHKRPGQGLGLSIVGRRNDTGVFVSDIIKGGLADADGRLTQGDQILSVNGEDVRSAT
QETVADLLKRCVGSLKMDVGRFKAGPFHSQRRLSQSSQMEQIIEPGTSKVASEMLSGDAS
QQAPDHQDVRTAEFTKGPGDSLGVSIAGGVGSPLGNIPIFIAMMNPVGLAAQTQKLTVGD
RIVSICGTSTEGMSHLQAVTLLKNTTGTIQLQVVAGGDHTVTGAAQEQAAGGLPLSGCIF
QDDLSPPQVKSITLARGADGLGFSIVGGYGSPHGDLPIYVKTVFGKGAAAEDGRLKRGDQ
IVAVNGQPLEGVTHEEAVGILKRTKGSVTLTVLS
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaatggacacgcagcgtgccttgcaggcggtggagcggctccaggcgaag
ctaaaggagcggggggaggtgcccaccgaggagaagctcagcctgctcaagtcggtgctc
cagagccctctcttccaccagatcctggccttgcagaagtccgtgcagcagctcaaagac
caggggtgtggcattcccgtctcagaaacgcaacacaacggcggccatgtcgcaagcccg
gacatcagcgccgaagaagcgaaatgtgatcaattggatcagattgttcagacgatggcc
cagggacgctacgtggctcacgtggacttgcagaagccggcgatggggggtctgggattc
agtgtggtgggactaaagagcgagaaccgcggtgagctgggcatcttcgtccaggagatt
caagtcgggagtgtggctcacagcgatggcaagctgaaggaagccgaccagattttggcc
atcaacggccagcccctggaccagacggttacccaccagcaggccatcggcatcctgcag
agggcgtcggagagggtgcagctcatcgtagcccggggtcccatacctcagctgtggcaa
cacgtggagacgatcgagctggtcaacgacggcaccggcctgggcttcgggatcgtggga
gggaagacgacgggcgtgattgtgaaaacaatccttcctggaggcatcgcagaccaggat
ggccgcctcagaagcggggaccacatcctcagaatcggagacacggacctctatgggatg
ggcagcgagcaggtggcgcaggttctgcggcagtgcgggaaccgggtgaagctggtcatc
acccgtgggaacgtggacgagaacccttcggtttccgcgtccgcgccgccggacaagggc
gctgagaaggacgaagaagaaggcgcctttgacgtcagcctcatcaagaacacccaaggg
ctggggatcacgattgccggatatgtgggcgataaaaattcagaaccttccggtattttc
gtcaagagcataaccaaagacagcgctgtagatcaagatggtcgtattcacgtgggagac
cagatcgtggctgtggacggcgtgaacatccaggaatacaccaaccagcaggccgtggaa
gtcctccggcacacgggccaggccgtccacctgaagctgatccgccgggggttccggccc
gacgagatcccccccgccgtggcccccgtcgtcaccgtcctgccgccgtccgacgccgtc
ctgaacgagccgcacacggagggacggacggaagcggatcgagataaaacgcagacccag
acgatgaaccacggagtcaccgtcgcgccggttgtagatcagcgaacagatgaagaacac
gggacgacaacaactccggcgcctttcgaggaagaggaactcgtgaaaaagtggcaagag
attttgggtgcaaataatgaagtcattgtggctcaggtggagaaattcagcgagagcagc
ggcctcgggatcagcctggaagccaacggcggccatcactacgtccgctccgtgctgccc
gaaggacccgtcgggcgttgtggcaaattattcagcggagatgaactggttgaggtcaac
ggtatatcgctgatcggcgagacccacaaggaggtggtccggatcttgaaggagctgccg
ctcagagtctacatgacatgctgcaggcccgccccccgccagcaggccgacgtcgacgcc
tcaaaaccacaaacggacgcgtcgtctgacggatcccagctaacgcaggaacaaatcaac
ttgagcggggtggacgtggtggaagcggcaagtgatgcgactccggaggtgccggcgtct
tctttggccatgtgggagctggagatccaaaatattgaactggagaaaggagctggagga
ttgggattcagtattttggactaccaggacccactggacccggccaagacggtcatcgtg
atccggtccctggttccgaacggcgtggccgagcaggacggacggctcctgccgggcgac
cgactgatgttcgtcaacgacaccaacctagaaagcgccagcctggaagacgccgtccaa
gctctcaagggggccgagctcggaatggtacaaatcggggtggccaaacccctgcccgtg
gacaccagtgaagtagaccagaaggctcttgagcacgcttacttcggtgacgaggacaca
ttccaggcctcgatgattgcgcttcacggaagttgctcggacctggatttcctgaatgca
tccacgcccgagacttcaagttacctcgacttcgtaccagcgtccgtgactgcccgactc
ggtgcttccgacgaagacctaaccaccaccgaacaaacgacggagcgctccgattcctac
ggcccgtttcacgaccttcagatcacacccgaagtccagccagaatcggaggaactggtt
cagtgtcaagtcgaagaaccctttctcggatttgaggacgaagacgcagaggcgggagcc
ggcgtcggcggccacgctgcaacctcgggaagcaatttcgaacggacgatcactgttgtc
aagggcaactcgagtctcggaatgaccgtgagcgccacgaaagactgcctgggggtgctg
atccggagcatcatccacggcgggtccatcagtcgggacgggcgcctgggggcgggcgac
ctcatcttagccatcaacggcgagtccaccgccaaactgagcaacgttcaagcccgcgcc
atgcttcgcaggcactctctggtcggaccggacatgggatccgcttgctcacctgaggat
gatctgtgcccgttttatgtgatcacgtacgtcccggcggagtatttggaggagtacaag
cgcagcctggagcggagcgacaacgacgacgacgtcttctccggactgccgtccgctccg
gctccaaaggatgttcccgcccttcccgagcgggaggatggtgagggagaagagagcgtg
tcttacagcaactggaaccaaccaagactagtggagctcttcagacagccgggcaagtcc
ttgggcatcagcatcgtcggcggccgcgggatgggcagccgcctgagcaacggcgaggtg
atgcggggtattttcatcaagcacatcctggacgacagtcccgccggacacaacaacacc
ttgaaaaccggagacaggatcgtggaggtgggcggcgtggatctgcgggacgccagtcac
gaggaggcggtggaggccatacgcagggcaggaaatcctgtgtccttcctggtgcagagc
attatccagaaacccaggccgtcgacgagtgcagaatccatcgaggagaacgcgccatcc
ctcccaagggaccgggaggacaaggagggtgacagtcacagtagacttgtcctccgcctc
tccccaactaaccctttcactcctaccccgtttaagccgaagaagcgcgacgctgcgaag
gcggtggccctcgccctgccggtggtgccccacccgggggagacggacaccgacacgctg
acggagattccggctgacccggcgaacggggaaggggacgagccggaatccagctggggc
gccatctttttgcaccgccgcatttcagagaacgtcgtcacgcgctacggcggcctcccg
ggtgccctgcacgccatcgagctggagaagggcaagacgggcctgggcctcagcctggcc
ggcaaccgggaccgcgcccgcatgagcgtctttgtggtgggcatcgaccccgcgggtgcg
gccggggcggacggacgcatgctcgtcggggatgagctcctcgagattaatgggcaggtc
ctctacggccacactcaccagaatgcgtctgccataatcaaaaactccccatctaaagtc
aaaatcatctttatcaggaacgcagaggcactggagcagatggcggtgggacccgtgaga
gaacccgagggggacccggccgagccccacgccgaggaagactttgcggtcggtgaaggg
accgcagaggacgagggaaccctccgagaaggctgcatcgaagttgtgaatggggaaccg
gaggtcgccagtctacccgacatgattggtcccggacaacccgaaactgttacaagtcat
agtcgttcgtctagcctctcgacgctggcctgcgacccagcaacttgccccatcatcccg
ggctgcgagaccatcattgacgtctccaaagggcggacgggtctggggcttagcatcgtt
gggggctgcgacactttgcttggagccatcatcatccacgaggtttacgaagaaggtgcg
gcctccaaggacggcaggctttgggctggagaccaaatcctagaggtgaacggcatcgac
ttgcgcgcagcgagccacgacgaggccatcaacgtgctgcggcagaccccgcagagagtc
cagctgaccgtctacagggacgaggcccagtacaaggaggaggacctgtgggactccttc
atcgtggagctgcataaaaggcctggccagggtctgggactcagcatcgtggggaggagg
aacgacacgggagtgtttgtgtctgacatcatcaaaggaggattagcggatgccgacgga
agactcacgcagggtgaccagatcctgtcggtcaacggagaagacgtccggtccgccacc
caggagacagtcgccgatcttctcaagcgctgtgtcggttcgctcaagatggacgtcggg
aggtttaaagccggccccttccattcgcaacgaaggctgtcccaaagtagccagatggaa
cagataatagaacctggcacctccaaggtggcttcggaaatgctttcaggtgatgcgagt
cagcaggctccagatcaccaggacgtgaggacggcggagttcaccaaaggtcccggcgat
tccctgggtgtcagtattgcaggtggcgtgggcagccccttgggcaacatacccatcttc
atcgccatgatgaaccccgtcggcctggcagcgcagacccaaaagctcacggttggggac
cggatcgttagcatctgtggaacttcaactgaaggcatgagccacttgcaagccgtcact
ttgctcaagaacaccacggggacgattcagctgcaagtggtggcggggggcgatcacacc
gtgaccggcgcggcgcaggagcaggcggccggaggccttccgttgtccggctgcatcttc
caggatgacctcagccctcctcaggtcaagagcatcactctggcgcgaggagcggacggg
ctgggcttcagcatcgtcggaggctacggcagcccccacggggaccttcccatctacgtc
aagacggtgttcggcaagggggcggcggcggaggacggccgcctgaagcggggcgaccag
atcgtggcggtcaacgggcagccgctggaaggcgtcacgcacgaggaggccgtgggcatc
ctgaagaggaccaaaggaagcgtgacgctgaccgtcttgtcctag
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