Syngnathoides biaculeatus (alligator pipefish): 133495116
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Entry
133495116 CDS
T09681
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04136
Autophagy - other
sbia04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133495116
04136 Autophagy - other
133495116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133495116
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133495116
Membrane trafficking [BR:
sbia04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
133495116
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133495116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
CPSF_A
Beta-prop_Vps41
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
133495116
NCBI-ProteinID:
XP_061665336
LinkDB
All DBs
Position
22:complement(11734001..11746384)
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AA seq
442 aa
AA seq
DB search
MDSQVEADGGGPEMLPGFICASFNQDTTSLSVGTKTGYRLFSVTSVDKLDCIHEGVECSD
VSIVERLFSSSLVVVVSQSVPRRMNVYHFKKGTEICNYSYTNNILSVRLNRQRLVVCLEE
SIYIHNIKDMKLLKTLLNTPTNPSGLCALSVNHGNSFLAYPGSATIGEIAVYDANNLSTV
TLIQAHASPLAALTFNGSGTKLASASEKGTVIRVFDIPEGHRLFEFRRGMKRYVSISSLS
FSADAQFLCASSNTETVHIFKLEQHSPSQEEASPTWSAYVGKMFTAASTYLPAQVSDMMH
QDRAFATVRLNMFGLKNICALATIQKLPRLLVASSDGHLYIYNVDPQDGGECIMVQKHRL
FDGTEEQVEHKDEETPAEVSNQVAGQSYAATVALPSSQPPSSTLLGYSEEGGAQKGDVIP
EHEFAEGPVCLDDENEFPPVSN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggtcgaagcggacggcggcggcccggagatgctcccgggcttcatctgt
gcttcgtttaaccaggacaccacttccctgtcagtgggcaccaagactggctaccgtctc
ttctcagtgacctctgtggacaaactggactgtattcatgagggagtggagtgctccgat
gtgtccatcgtggagcggctgttctccagcagcctggtggtggtggtcagtcaatcggtg
ccgcggcggatgaacgtctatcacttcaagaaaggtaccgagatctgcaactacagctac
accaacaacatcctctccgtcaggctcaacagacagcgacttgtggtgtgcctggaggag
tccatatacatccacaatatcaaagatatgaaactcctcaagactctgctcaacaccccc
accaacccttcaggtctctgcgccctgtctgtcaaccacggtaattctttcctggcatac
ccgggcagcgccactattggagagatcgcagtgtacgacgcaaacaacttgagcactgtg
acgctgatccaggcccacgccagtcccctggcggcgctcaccttcaacggctccggcacc
aaactcgccagcgcgtcggaaaagggcaccgttatcagggtgttcgacattcccgaagga
cacaggctgtttgagttccggcgagggatgaaaagatatgttagtattagttcactgtcc
ttcagcgctgacgcccagttcctatgtgcctccagcaacacagagacagtacatatcttc
aagctggagcagcacagtcccagtcaagaggaggcgtcccccacgtggtccgcgtacgtg
ggcaaaatgttcacagcggccagcacttacttgccagctcaggtgtccgacatgatgcat
caggaccgggcctttgccactgtgcggctcaacatgttcggcctgaagaacatctgcgct
ctggcgacgattcagaagctgcctcgcctgctggtggcgtcctcggacgggcatctttac
atctataatgtggatccgcaggacggaggcgagtgcataatggtccaaaaacacaggttg
tttgatggcactgaggagcaggtggaacacaaggatgaggagaccccagcggaggtctcc
aaccaagtcgccggccaatcgtacgcagccaccgtggcgctcccttccagccagcccccc
tcttccacgctcttgggatactcggaggaaggaggagcccagaagggggacgtgatcccg
gagcacgagttcgccgagggccccgtgtgtctggatgacgagaacgaatttcctccagtc
agtaactag
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