Syngnathoides biaculeatus (alligator pipefish): 133495148
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Entry
133495148 CDS
T09681
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133495148 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133495148 (gspt1)
03012 Translation factors [BR:
sbia03012
]
133495148 (gspt1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133495148 (gspt1)
Translation factors [BR:
sbia03012
]
Eukaryotic type
Release factors
133495148 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
133495148
NCBI-ProteinID:
XP_061665397
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All DBs
Position
22:complement(7819248..7828974)
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AA seq
567 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPATSAALPSAFAALNVNAKPFVPNLNAPVFVPTFLQTSAAE
MPSSDGPVENGGSEADMAAYEDTWEQNDEPGGGGGQEDPVVAGDCQPYAENKEDEEMIME
EEEEMPVPKVAPSTPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYERE
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLD
RYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPVPECPWYTGLPFIPHLDSLP
HFTRSIHGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHIVEVLSLLSDEVE
TDDAGPGENLKMRLKGIEEEEILPGFILCSPDNLCHTGRTFDAQIVIIEHKSIICPGYNA
VLHLHNCIEEVQISALICMVDKKTGEKSKMRPRFVKQDQVCIARFRAAGVICMETFKDFP
QMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacggctccagattcgtgggagctggaggaagacgccgaggccccg
gccacctcggcggctctcccgagcgccttcgccgcactcaatgtcaacgccaagccgttt
gtccccaacctcaacgccccggtgttcgtgccgaccttccttcaaaccagcgccgcggaa
atgccttcttccgacggtccggtggaaaacggcggctcggaggcagatatggctgcctac
gaagacacgtgggagcagaacgatgagccgggcggaggtggcggacaagaggacccggtg
gtggcgggggactgtcagccgtatgctgagaacaaagaggatgaggagatgatcatggag
gaggaagaggagatgcctgtgccaaaagtggcaccttcaacaccggacgcccccaagaaa
gagcatgtgaatgtcgtcttcatcggtcatgtggatgctggaaagtcaactattggggga
cagatcatgtatctcactggaatggtggaaaagcgaactttggaaaaatacgaaagggaa
gcgaaagaaaaaaacagagagacatggtacctttcgtgggcactggacaccaaccaggag
gagcgagacaaggggaagacggtggaggtaggcagggcttactttgagactgagaaaaaa
cacttcaccatcctcgacgcgcccggacacaagagctttgtcccaaacatgattggagga
gcgtcgcaagccgatctggctgtcttggtgatctcggcaagaaagggagagtttgagacc
ggctttgaaaagggcggacagactcgggaacacgctatgttggctaaaacggcaggtgtc
aagcatctcattgtcctggtcaacaagatggatgaccccactgtcaactggagcctagac
aggtatgaagagtgtaaggagaagctagtgccattcctaaagaaggttggcttcaacccc
aagaaggacatctactttatgccttgctccggactcacaggtgccaacctcaaggaacct
gtacctgaatgtccctggtacacgggtttgccatttattccccacttggatagtctgcct
cacttcaccagatccatccatggtccagtcagactccccatcgttgataagtacaaggac
atgggtacagtcatcctcgggaagttggagtcgggatccatcagcaaagcccagcagttg
gtaatgatgcctaacaggcacatagtggaagtactgagcctcctaagcgatgaggtggag
acggatgacgcaggtcctggggagaacctgaagatgaggctgaagggcatcgaggaagag
gagatcctgcctggtttcatcttatgcagccctgacaacctttgccacaccggccgcacc
tttgacgctcagatcgtcatcattgagcacaaatcaatcatttgtcctggttacaatgca
gttcttcacctccataactgtattgaagaagtgcaaatctcagccttaatttgtatggtg
gacaagaagacgggagagaaaagtaaaatgcggccacgctttgttaagcaggaccaggtt
tgtatcgccaggttccgagcagcaggcgtcatctgcatggagactttcaaggactttcct
caaatggggagattcacgctacgagatgaaggcaaaaccattgccatcggaaaagtgctg
aagctggtgccggaaaaggactaa
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