Syngnathoides biaculeatus (alligator pipefish): 133495287
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Entry
133495287 CDS
T09681
Name
(RefSeq) TATA-box-binding protein-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133495287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133495287
03021 Transcription machinery [BR:
sbia03021
]
133495287
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
133495287
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133495287
RNA polymerase III system
TFIIIB
133495287
RNA polymerase I system
SL1/TIF-1B
133495287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
133495287
NCBI-ProteinID:
XP_061665735
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All DBs
Position
22:18225515..18229065
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AA seq
281 aa
AA seq
DB search
MPGAGGSAWKSDSAAVLSSPPETAPPPQSLPWRFFFHLKKKKKKHFKDVRGGGKPAAVRE
RPPGFGHAGPVQELRAGGLLPPGGGGAPPDPAPAPAAPAAACCCCCCCCCCCPASRPSCL
LHAQTRRPLDRQAAHGPADSVFKSLVMKIRKPQTTARIFQSGILFCTGAKSEGESRVAAR
KFAFKILKLGYPVRFLDFKVLNIGGTCKTFPINLEDLFLAHQDHCSYEPELFPALQYNFR
PGMTASIFSSGSVSLVGAKTEDEFYRAFRSLDAILTGFRRT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgcgggcggctccgcgtggaaatcggactccgctgccgtcctctcatctccc
ccggagaccgccccccccccccaaagtctcccctggcgctttttctttcatttaaaaaaa
aaaaaaaaaaaacattttaaggatgttcgtggcggtggaaagccggcagctgtccgagaa
cgaccgccgggttttggccatgcaggccctgtgcaggagctccgagccggtggcctcctt
cctcccggtggtggtggagcccccccagacccagccccagccccagccgcccccgccgcc
gcctgctgctgctgctgctgctgctgctgctgttgcccggcaagccgcccttcctgcctc
ctccacgcgcagacccgccgcccgctggaccgccaagccgcgcacgggcccgcagattca
gtcttcaagtcgctcgtcatgaagatccgcaagccccaaaccacggccaggatcttccag
tcgggaatcctgttctgcacaggagccaagagcgagggcgagtcccgggtggccgccagg
aagttcgccttcaaaatcctcaagctgggctacccggtccgcttcctggactttaaggtg
ctcaacatcggcggcacttgcaagacgttccccatcaacctggaggatctgttcttggcc
caccaggaccactgcagttacgaaccggagttgttccccgcgctccagtacaacttccgc
cccggcatgacggcgtccatcttttcctcgggttcggtctcgctggtcggcgccaaaacg
gaggacgaattctacagagcctttcgcagcctggacgccatcttgacgggattccgcagg
acgtga
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