Syngnathoides biaculeatus (alligator pipefish): 133495330
Help
Entry
133495330 CDS
T09681
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133495330 (rhbdl1)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
133495330 (rhbdl1)
Peptidases and inhibitors [BR:
sbia01002
]
Serine peptidases
Family S54: Rhomboid family
133495330 (rhbdl1)
BRITE hierarchy
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
133495330
NCBI-ProteinID:
XP_061665814
LinkDB
All DBs
Position
22:complement(15984783..16026786)
Genome browser
AA seq
500 aa
AA seq
DB search
MHNKRTLLGGVHECIGSLFCCICRSCRRHLQYFPVSVTLPSVFICICSCLKNGLICVLLT
LVPTVKFLQTARRGQCQMFLKRLNVLNEVVGFCKWSDPCGSMTLTGHKISCHVSAAVFHF
SSPLKLALAVAGSCRWQRKHELDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLLALVQS
NEDGQVCYQELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEIL
PCETDRRWYFHQNRLCPPPVFIAVITIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYH
PGHRAQVWRFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYMAGVLAGSLT
VSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVW
LRFSPPLPSSGPQPSFMAHLSGAVVGISVGLLILRSYEESLQKQCTWWVIVFSFITFLLF
AIFWNIFAYELLAVQIPPAP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcacaataaaagaacactcctgggcggggtccatgaatgcattggatcgttgttctgt
tgcatttgcagaagctgtcgtcgacatcttcaatatttccccgtaagtgtaacacttcca
tcggtatttatatgtatttgtagttgtttgaaaaacggcctgatttgtgttctcctgact
ctcgtcccaacagtaaagttcctccaaaccgccagaagagggcagtgtcagatgtttctt
aaaagactaaatgtactgaatgaagtggtaggattttgcaagtggtccgacccctgcggc
agcatgacgctcaccggccacaaaattagttgccacgtttcggcggcagtatttcacttc
agttcaccgctcaagcttgcactggcggttgcaggttcctgcagatggcaacgcaaacac
gagctggatccagacaacaccggtttcatcgcagtggagaacttcactagcctagtggag
caccatgagttgcagctggacccgtccaaactggacatgctgttagcgttggtccagagc
aatgaggacggccaagtgtgttaccaggagctcatcgagctgatgagcagcaagcgctcc
agcagtttccgacgggccatcgccaacggtcgccgcacgctgcagcgggagatcctgctg
gacgagacgggcctgggcctctacaagcgattcgtccgctacgtggcctacgagatcctg
ccctgcgagaccgaccggcgctggtacttccaccaaaaccgcctgtgcccgccgcccgtc
ttcatcgccgtcatcaccattgtccagattatcgtgttcatgtgctacggcatcatgctc
aacaagtgggtgctgcagacctaccagccggacttcatgaagagcccgctggtgtaccac
ccgggccaccgcgcccaagtgtggcgcttcttcagctacatgttcatgcacgtcggcttg
gagcagctgggcttcaacgcgttgctgcagctgatgatcggagtcccgctggagatggtc
cacggcgtcttacggataagtctgctgtacatggcgggagtgctggcgggttcactgacg
gtgtccatcaccgacatgcgcgctccggtggtggggggctccggcggggtctacgctctc
tgctcggcacatctggccaacgttgtcatgaactgggccgggatgagatgtccgtacaag
ctgctccgcatgatcctggcgctggtttgcatgagctcggaggtgggccgggcggtgtgg
ctgcgcttctcgccgccgctgccgtcgtccgggccgcagcccagcttcatggcccacctg
tcgggcgccgtggtgggcatcagcgtgggcctgctgatcctgcgcagctacgaggagagc
ctgcagaagcagtgcacctggtgggtcatcgtcttctccttcatcaccttcctcctcttc
gccatcttctggaacatcttcgcctacgagctgctggccgtgcagatcccgcccgctccc
tga
DBGET
integrated database retrieval system
