Syngnathoides biaculeatus (alligator pipefish): 133495378
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Entry
133495378 CDS
T09681
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133495378 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133495378 (nrxn1a)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
133495378 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
133495378
NCBI-ProteinID:
XP_061665929
LinkDB
All DBs
Position
22:complement(16667648..16738431)
Genome browser
AA seq
1523 aa
AA seq
DB search
MSVMAMCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTRSQEGLLLYLDDEGFCDFLELLLLRGHLRLRFSIFCAEPAELQSGVAVSDGRWHAVRV
KRDWKNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYVGGVTAELRASPLRLTAPSVRDHPA
FRGWMGAVSINGSLAALDASEGVTVTAGCGPDHRCQNGGVCSLVDDRAVCDCSDTGYQGN
DCSEERSHTPGLAHLMIGDQGPPQHTCTHTHARPPPSSSPHGAGRKLSLSALNQAREEYV
ATFKGSEFFCYDLSPNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLV
INLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQE
DYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKM
KVSGVVSFKCESVATLDPVTFDTPESFVALSKWTAKKAGSISFDFRTTEPNGLMLFSHGK
PRQIQRKDPRTPPTVKVDFFAIEMLDGHLYLLLDMGSGTTKTKAIDRKVNDGEWYHVDFQ
RDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYLGGLPEDRAGLIFPTEVWTALLNYGYV
GCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSREPPKQCLSNPCQHNGVCREGWNRYVCD
CSGTGYLGRSCERDATILSYDGSKFMKVQLPMAMHTEAEDVSLRFRSQRAYGVLMATTSR
NSADTLRLELDGGRVRLTVNLDCIRINCTASKGPETIFAGSGLNDNEWHTVRVVRRGKGL
KLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEKRFMPAVPSNFIGHLQGLALNGMPYID
LCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSFVTLPTLQAYYSMHLFMQFKTTSPDGL
VLFNRGDGNDFIVVELVKGYLHYISDLGNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLH
TVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEMYRDLPKLVHSREGFQGCLATVDLNGR
LPDLLADALATVGQVERGCEGPSTTCQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCND
AGTTYIFGRDGGVVVYTWPPNERPSTRADRLALGFSTQQKQAVLLRVDSASGLGDYLQLQ
IDKGNIRVVFNVGTDDINIEESSKFVNDGKYHIVRFTRSGGNATLQLDDLPVIERYPSGN
IDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQTTVRVGGGGERRAGMFQGQLSG
LYYNGLRILNMAAEGHPHVRVEGSARLVGDMPSSSITPQSSAAAAPGGGANRSDSAPAGG
DVTATTASNRKQGATQQSADDILVASAECPSDDEDIDPCDPSSARPPLPEVKVFPGPSEV
VRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGSA
KDKPLGITKLSKNKKNKDKEYYV
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggccatgtgcgtctgggcggcggcccctctgctcttcctgggcctgtgc
ctgtgcagcgtggggggccaggcccaaggcgaggtcctggagttcggcggcgtgtccagc
cagtgggggcgcttccccgtgtggaacgcctgctgcgagagcgtgctgagcttcagcctg
cggacgcgcagccaggagggcctgctgctctacctggacgacgagggcttctgcgacttc
ctggagctcctgctcctgcgcggccacctccgcctgcgcttctccatcttctgcgccgag
cccgccgagctgcagtcgggcgtggcggtgagcgacgggcgctggcacgccgtgcgcgtc
aagcgggactggaagaacacctcgctggaggtggacgggcggctggagggctgggcggag
gtgaagagcaagcggagagacatgacggtgttcagccacacctacgtgggcggggtgacg
gcggagctgcgcgcgtcgccgctgcgcctgactgcgccgtcggtgcgcgaccaccccgcc
ttccgcggctggatgggggcggtcagcatcaacggctcgctggccgcgctggacgcctcc
gagggcgtgacggtgacggcgggctgcgggccggaccaccgctgccagaacggaggggtg
tgcagcctggtggacgaccgggccgtctgcgactgctccgacaccggttaccaaggcaac
gactgcagcgaagagcgcagccacacgccaggtctggcacacctgatgattggcgaccaa
ggcccccctcaacacacgtgcacgcacacacatgcccgccctcctccatcttcatcaccg
catggcgcagggaggaagttgtctctctcggcgctgaaccaagcccgcgaagagtacgtg
gccaccttcaagggctccgagttcttctgctacgacctgtcgcccaaccccatccagtcg
agcagcgacgagatcacgctgtcgttcaagacgctgcagcgcaacgggctgatgctgcac
acgggcaagtcggccgactacgtcaacctggcgctgaagaacggcgccgtgtcgctggtc
atcaacctgggctcgggcgccttcgaggccctggtggagcccgtcaacggcaagttcaac
gacaacgcctggcacgacgtcaaggtcacccgcaacctgagacagcactcaggcattgga
cacgctatggtgaccatctcggtggacgggatcctgaccaccacgggctacacccaggag
gactacaccatgctggggtccgacgacttcttctacgtgggaggcagccccagcacggcg
gacctgccgggctccccagtcagcaacaacttcatgggctgtttgaaagaggtggtgtac
aagaacaacgacgtgcggctggagctgtctcgactggctaagcagggggaccccaagatg
aaggtgagcggcgtggtgtccttcaagtgcgagagcgtggccacgctggatcccgtcacc
ttcgacacgcccgagtccttcgtggcgctgagcaagtggacggccaagaaggcgggctcc
atctccttcgacttccggaccaccgagcccaacggcttgatgctcttcagccacgggaag
cccaggcagattcagcgcaaggacccccgcacgccgcccaccgtcaaggtggacttcttc
gccattgagatgctggacggccacctgtacctgctgctggacatgggctcggggaccacc
aagaccaaggccatcgacaggaaggtcaacgacggcgagtggtaccacgtggactttcag
agggacgggcgctcagggaccatctcggtgaacagcgtgagaacggcgtacacggctccc
ggcgacagcgagatcctggacctggacgacacgctgtacctcggcggtcttcccgaggac
cgcgccgggctcatcttccccacggaggtgtggacggcgctgttgaactacggctacgtg
ggctgcatccgcgaccttttcgtggacggccagagcaaagacatccggcgtctggccgag
gcccagcgggcggtgggcgtcaagccctcgtgctcccgcgagccccccaagcagtgcctg
tccaacccgtgccagcacaacggcgtctgccgggagggctggaaccgctacgtctgcgac
tgctcgggcaccgggtacctgggacgctcctgcgagcgagacgcgaccatcctgtcgtac
gacggcagcaagtttatgaaggtgcagctgcccatggccatgcacacggaggcggaggac
gtgtcgctgcgcttccgctcccagcgggcctacggcgtcctcatggcgaccacgtcccgc
aactcggccgacaccctccggctggagctggacggcggccgcgtgcgcctcaccgtcaac
ttagactgtatcaggataaactgtaccgccagtaaaggcccagagaccatctttgcgggc
tcgggtctcaatgataatgagtggcacacggtgcgggtggtccggcgcggcaagggcctc
aagctcaccgtggacgacctgcagcccgtcgaaggtcaaatggcgggcgaccacacgcag
ctggagttccacaacgtggagacgggcatcgtgacggagaagcgcttcatgccggccgtg
ccgtccaacttcatcgggcacctgcagggcctggcgctcaacgggatgccctacatcgac
ctgtgcaagaacggcgacatcgactactgcgagctcaacgccgtcatcggctacaagagc
atcgtggccgacccggtcaccttccgctcgcgctccagcttcgtcacgctgcccacgttg
caggcctactactccatgcacctcttcatgcagttcaagaccacctcgcccgacgggctg
gtcctcttcaaccgcggcgacggcaacgacttcatcgtggtggagctggtcaaaggatac
cttcactacatctccgacctgggcaacggcgcccacctgatcaagggcaactccaacagc
cccctgaacgacaaccactggcacaacgtgcacatctcccgggacaccaacaacctccac
accgtcaagatcgacaccaaagtcaccacgcagaccaccatgggcgccaagaacctggac
ttgaagggtgacctgtacatcgggggcgtgtccaaagagatgtaccgggacctccccaag
ttggtgcactcgcgcgagggcttccagggctgcctggccaccgtggacctgaacgggcga
ctgcccgacctgctggcggacgccctggccaccgttgggcaggtggagcggggctgcgaa
ggtcccagcaccacgtgccaggaggactcgtgctccaatcagggcgtctgcctgcagcag
tgggagggcttcacctgcgactgcagcatgacctcgtacgccggaccgctgtgcaacgac
gccggcaccacgtacatcttcggccgcgacggcggcgtggtggtctacacgtggcccccc
aacgagcgccccagcacccgggccgaccggctggccttgggcttcagcacccagcagaag
caggccgtcctgctgcgagtggacagcgcgtccggcctgggagattacctgcagctgcag
atagacaagggcaacatccgcgtggtgttcaacgtgggcacggacgacatcaacatcgag
gagagctccaagttcgtcaacgacgggaagtaccacatcgtgcgcttcacgcgcagcggc
ggcaacgccacgctgcagctggacgacctgcccgtcatcgagcgctacccctcaggcaac
attgataacgagcgcctggccatcgccagacagcgaatcccctatcggctcggtcgagta
gttgacgattggctactcgacaaaggtcggcagctgaccatcttcaacagccagacgacg
gtgcgcgtgggtggcggcggcgagcgacgcgccggaatgttccagggccagctgtcgggc
ttgtactacaacggcctgcgcatcctcaacatggcggccgagggccacccccacgtccgc
gtggagggcagcgcccggctggtgggcgacatgccgtcctcctccatcacgccgcagtcc
agcgccgccgccgcccccggaggcggggccaaccgctccgactcggcgcccgccggcggg
gacgtgacggccaccaccgccagcaacaggaagcagggagccacgcagcagtcggcggac
gacatcctggtggcgtcggcggagtgtccgagcgacgacgaagacatcgacccgtgcgat
cccagctcagcacgtccccccttgcccgaggtgaaggtgttccccgggccgtcggaggtg
gtccgcgagagcagcagcaccacgggcatggtggtgggcatcgtggcggcggcggccctg
tgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgggacgagggctcgtac
cacgtggacgagagccgcaactacatcagcaactcggccacgcagcccaacggcagcgcc
aaggacaagccgctgggcatcaccaagctctccaagaacaagaagaacaaggacaaggag
tactacgtctaa
DBGET
integrated database retrieval system
