Syngnathoides biaculeatus (alligator pipefish): 133495566
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Entry
133495566 CDS
T09681
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133495566 (med1)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
133495566 (med1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
133495566
NCBI-ProteinID:
XP_061666374
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All DBs
Position
22:complement(17264506..17275354)
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AA seq
1795 aa
AA seq
DB search
MAAGPAVGMQRSPATELPLPVLPAGGQPHGERVKTEEMTESEKQSRMAAMLERLHAKHNA
SRPWQETSKVVRQAMEKRGMMNTAGHQLLLTCLETLQRALKVSSLPSMTDRLESIARQNM
LGSHLSPSGTECYITSDMFYVEVQLDGAGQLVDVKVAHQGENPTSCPELVQHLREKNFEE
FSKHLKGLVDLYKLPGDNKLKTKMYIALQSLELDLTKMMHMFRLATNANAVETILHGNVG
LLTARSGGHLVTLQCYVSPYDIFEKGMGVHNLTDANVPRSLGVSVSVTIEGTANTHKLPI
APLITGSHPVDNKGTPSFSTVTNSNCVDLPACFFLKMNRPMPFSLSFIHRLGNATAIPVF
ESPPAPSALYQLIVQSQLQPQEEGGAAALTPSHNMHFYSVLPDQQHCYFLNGDAPVQDGD
SLQGALVSKIPFRHPAQVPILLDIIRHQATYNTLIGSCVKRAAIKEDSVSLLQFEVCPLT
DSSFSVSFQHPVNESLVCVVMDVIDSRQVSCKLYKGLSDALICTDDFITKVVQRCMSIPV
TMRAIRRKAETIQADTPALSLIAQTVETMVKNNPPPSGSPAYNMAGGDMGNPMGFMGLTG
DNTPAGGGPPGGPNFAGPITSLFGMSRGERQGAECQSQDGQQQQVQQQQQQQQQQQQQQQ
QQGQGHTDDYSKVTQNPILTSLLQITGSVGSSPSSQNAPPPHQTPPPTSSPASNTKNHPM
LMNLLKDNPSQDFAALYGSSPLERQNSSSGSPRTDSMGGACPGAQGAKGKKKRPRVPEKG
GVLPGTPGAGGASGGMKSQQSSSMCHHQHHAVTHEDDFHRELLSMDVDASQNSIFDVNLA
GDGLDTPHSITPAPSQCGTPPSGSGMPYPPSHIQAQPPPGAVPPRMVRLSSSDSIGPDIT
EILSDLPEQTGKANSGGQHPMAGGGEDAGPLGTPIRDSSISGQGSAMYDSADIFNTNSNE
NPFTDAADLIAEAAATPSSDLSSTNFFSDAADFNPDLLNSGHSLSQNCFEDSSPSTDRDM
DQVKGFGSSSQQNTPSGLSQNPASHGQNTSEPSLKDPFDMGMFFGGNSGTGKPLLGQAPD
LGDTHFGGSQSPLMMGLGQACIDFKSAESKVKQQSLMRQKDENGGSGSSGSGMGGNSIEG
KQLKRSRTPSSEGKSKEKQPKRKKLDPDGKSPSHSSGGRPYTPPSGGSGSGGSLSGGGSK
SPGSSGCSQTPPGGATPPIPKITIQIPKGGKTSSHSGYTSSSSASSGTGGVGGPSSSKSH
HSHSSSGKIKSKEGSMAQGNSSKSASGPGISGGPSQSKGSSQGMGVGKPGSSPITKHGLS
GTGSSGGGLGTGNKMKSQGGKPPGSLMNPSIKPNISPSHSRSSSSGEKLSSPMKMQQSQV
PGTPPSSKAKSPMGSGGGSSGQSKSSSGGGMSSQKPGGGTSSTSTSSSSNSSSSSGSMGF
SGGSQSQYSGGGGGGGGSGSGGSGGGGGNCGGAGQNNANNPNAKGKSPSRNKKPSLTAVI
DKLKSVGGVGEDGCEVGPPGCPPGSGAPASGVPGNVPPSNMGPTKHSASSQSGDYKRERS
DKEGKAKVSVSGVNSGDKKLMEPKTGGVSGSGLTKIIISKPDGGSPSIKAKVTLQKGAEG
PGESMRPQISGLKASPLFSGSTPKHDRSSPSHSRSPGHTPLNHDSESESGSSSVAEKSHQ
NSPSSDDDQTSRPLPAQQDYLSAVPLGSVEKHKKHKKEKKKRERERERDKEKKKSSMAAG
PSSHPMKADGWSRSPISASESSLSMLDSERPSRASPMYMRNEDDDLMDSALTGNL
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccagcggtgggcatgcagcgcagtccggcaacggaacttcccctcccg
gttcttccggcgggggggcagcctcacggggagcgggtgaaaaccgaagagatgaccgaa
tctgaaaagcagagtcgcatggctgccatgctggagaggcttcacgccaagcacaacgcg
tcgcgcccgtggcaagagaccagcaaggttgtgcgtcaagccatggagaaacgcgggatg
atgaacaccgccggtcatcagctgctgctcacctgtttggagaccctgcagagggcgctc
aaagtttcatctttgccctccatgacagatcgtctggagtccatcgcgagacaaaacatg
ctgggctcccacctgagcccctcgggaaccgagtgctacatcacttccgatatgttttac
gtggaggtgcaactggacggcgctggtcagcttgtggacgtcaaagtggctcatcagggt
gaaaaccccacgagctgtccagaattggttcaacatctaagggagaagaactttgaggag
ttttccaaacatcttaagggactggttgacctgtacaagctccccggagacaataaactg
aaaacaaagatgtatattgccttgcagtctctggagctggatctcaccaagatgatgcac
atgttccggttagcgactaacgcgaatgccgtggaaacgatcctacatggcaacgtgggc
ctgctgactgccaggagcggcggccatcttgtcactctgcagtgctacgtgtcgccgtat
gacatattcgagaagggaatgggcgtgcacaacctgacagatgccaacgtgccacgttcg
ctgggcgtcagcgtttccgtgaccatcgagggaacggccaacacgcacaagctccccatt
gcgccgctcatcactggatctcacccggtggacaacaagggaacaccgtccttttctacg
gtgaccaactccaactgtgtggacctgccggcttgttttttcctcaagatgaatcgcccc
atgcccttctccctgtcctttattcacagactgggcaacgctacagctatcccggtgttt
gaaagcccccccgccccgtctgctctctaccagctgattgtgcagagccaacttcagccc
caggaggaggggggcgccgccgcgctgacgccctcgcacaacatgcacttctattcggtg
ctgccagaccagcagcactgctacttcctgaacggcgacgcccccgtgcaggatggtgat
tctctccaaggcgccctggtgagcaagatcccctttcgccacccagctcaggtgccaatc
ctgctggacatcatccggcatcaggccacctacaacaccttgattggcagctgcgtcaag
cgggcagccatcaaagaagacagcgtaagcctgctgcagttcgaggtttgccccctgacc
gactccagcttcagcgtctctttccagcatcccgtcaatgaatcgttagtctgcgttgta
atggacgtgatagactccaggcaggtgtcctgcaagctatataaaggattgtctgacgca
ttgatctgcaccgatgacttcattaccaaagtagtccagaggtgtatgtccatccccgta
acgatgcgggccatccggaggaaagcggagaccatccaggcggacactccggccctgtcc
ttgatcgcgcagacggtggagaccatggtaaaaaataacccgccgccatccggcagtccg
gcctacaacatggcaggcggagatatggggaacccaatgggcttcatgggactcactggc
gacaacacgcccgccggaggaggaccccccggcgggcccaatttcgccgggccgatcacg
tctctgttcgggatgtctcgcggtgaaaggcaaggagcggagtgccaatctcaagatgga
caacaacagcaggtgcagcagcagcagcagcagcagcaacaacaacagcagcagcagcag
cagcagggtcagggccacactgatgactacagcaaagtgactcagaacccaatcctgacg
agtcttctgcagataacaggaagcgtcggttccagtcccagctctcagaacgcgccgccg
cctcaccagactccgccgccgacatcttcgcctgcgagcaacaccaagaatcatcccatg
ctgatgaacttgttgaaagacaacccctcacaagacttcgcagccctgtatggttccagt
ccgcttgagaggcagaattcgtcatcggggtcgcctcgtacggacagcatggggggtgct
tgccctggagcgcagggcgcaaaaggcaagaagaagcgtccacgggtgccagaaaagggc
ggcgtgttgcccgggactcccggcgcagggggagcgtcgggaggtatgaaatctcaacag
tcgtcttccatgtgtcaccatcagcaccacgcggtcacgcatgaggacgatttccatcgc
gagcttctctctatggacgtcgatgcatctcagaactcaatatttgatgtcaacctggcg
ggcgacggcctggacaccccacacagcatcaccccggccccgagccaatgcggaaccccg
ccttccggctccggcatgccttatccgccgtctcatattcaggctcagccgccgccgggc
gccgtaccgccccgcatggtgcgcctgtccagctccgacagtatcggaccagatatcacg
gaaatcctgtcagatttgcctgagcaaaccgggaaagccaacagtggaggacagcatccg
atggccgggggcggggaagacgcgggcccgctggggactcccattcgggactcctccatt
tcaggacagggcagcgccatgtatgactcggcagacattttcaacaccaacagcaacgag
aaccctttcaccgacgccgcagacttgatcgccgaggccgcggccacaccctccagcgat
ttgtcctccactaatttcttctccgacgctgccgacttcaaccccgaccttctgaactcg
ggtcacagcctgtcccagaattgctttgaggacagttcaccgagcacggacagagacatg
gaccaggtcaagggctttggcagcagcagtcagcagaacacgccctcaggtctgtcccag
aatcccgcatcgcacgggcaaaacacctccgagccctcgctcaaggacccctttgatatg
ggaatgtttttcggaggcaacagcggcaccggcaagccgcttctcggacaagccccagat
ttgggagacactcatttcggaggctcccagagccctctgatgatgggcttggggcaagcg
tgcattgatttcaaaagcgcagagtccaaagtaaaacaacagagcctcatgcggcaaaag
gatgagaacggcgggagcggaagtagcggctccggaatggggggaaattccattgagggg
aagcagctgaagcgtagcaggactccatccagtgagggaaagtccaaagagaagcaaccc
aaacgtaagaaactggacccagacggtaagtcgccctctcacagctccggtggacgaccg
tacacgcctcccagcggcggctccggctccgggggcagcttgagcggaggaggctccaag
tctccgggaagttccggatgctctcagactccgcccggcggtgccacgcctcccatcccc
aagattacaattcagatccccaaaggtgggaaaacctcctcccatagtggctacacgtcc
agcagttcagcctcgagcggcacaggaggagttggggggccgagcagcagcaaaagccac
cattctcattcttcttctgggaagatcaagtccaaggaaggttccatggcgcaaggcaac
agctccaagtcagcgagcggtccggggatcagtggcggaccatcccagtccaagggttct
tctcagggaatgggcgtcgggaaaccgggctcgtccccgatcacgaaacatggactctct
ggtacaggaagcagtggaggtggtctcgggactgggaacaagatgaaaagtcagggcggg
aagcctcccgggtctctgatgaatccaagcatcaagcccaacatctccccttctcactct
cgatccagcagctctggtgaaaagctgtcttcgcccatgaaaatgcagcagtcccaggtg
ccgggaacgcccccctcctctaaggccaaatccccaatgggctcgggaggtggcagctcc
ggacaatccaagagttcttccgggggcggtatgagctcccagaaaccaggaggcgggacc
tcctccacttccacgtcttcctcctccaactcttcttcttcatccgggtccatgggcttt
tctggtggttcccagtctcagtatagcggagggggcggcggaggcggggggagtggaagt
ggtggcagcggaggtggaggcgggaactgtgggggggcaggacagaacaacgccaacaac
ccaaacgccaaagggaagtctcccagccgaaacaagaaaccgtccctcacggcggtgatt
gacaagctgaagagtgtggggggcgtgggggaggacgggtgcgaagtggggccgcccggt
tgcccgcctggttccggggccccggccagcggcgtgcctggaaacgtcccgccttcaaac
atgggtcccaccaagcactccgcttcgtcccaaagcggagactataaacgggagaggtcc
gataaagaagggaaggccaaagtgtctgtttcgggggtgaacagtggcgataaaaagctg
atggagcccaaaaccggaggcgtgagcgggtccggcttgaccaagatcatcatcagcaaa
cccgacggaggctcgcccagcatcaaggccaaagtcaccctgcagaaaggggcggagggg
cccggcgagtccatgcggccccagatcagcggcctgaaagcctcgccgctgttcagcggc
tccacgcccaaacacgaccgctcgtccccgagccacagccgctcgccgggccacacgccg
ctcaatcacgacagcgagagcgagtcgggcagcagctcggtggccgagaagtcccaccag
aacagccccagctccgacgacgaccagacgtctcgacctcttcccgcccagcaggactac
ttgagcgccgtcccgctcgggtccgtggagaagcacaagaagcacaaaaaggagaagaag
aagagggagcgcgagagggaacgcgacaaagagaagaagaagtcgtccatggccgccggg
ccgtcgtcccaccccatgaaagcggacggctggtcccggtcgcccatctcggcctcggaa
tcttctttgtccatgctggactcggagcggccctcgcgagccagtcccatgtacatgagg
aacgaagacgacgatctcatggactcggcgctcaccggcaacctttaa
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integrated database retrieval system
