Syngnathoides biaculeatus (alligator pipefish): 133495618
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Entry
133495618 CDS
T09681
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133495618 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133495618 (smarcd2)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133495618 (smarcd2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133495618 (smarcd2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133495618 (smarcd2)
PBAF complex
133495618 (smarcd2)
GBAF(ncBAF) complex
133495618 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SAM_KSR1_N
Spiralin
Motif
Other DBs
NCBI-GeneID:
133495618
NCBI-ProteinID:
XP_061666469
LinkDB
All DBs
Position
22:complement(15157897..15168194)
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AA seq
533 aa
AA seq
DB search
MATRGNFAGPTVSPMNVGLAAALRMPGIPPAATSYPRSVSTAPQYPQRPGMPLGRVSGPL
GSMGGQLPGPSYCGSGVPARPGMRPPAAADNSRKRLFHHQQQQQQQQEALGGHRRGAKRR
KMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTYTPCKPDGNEADKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQVRALFRAVPLSNLTCSIAVLNVV
VVVFLPRIQPPQYKLDLRLARLLGVHTQTRASIMQALWLYIKNNKLQDSHEKEYINCNHY
FRKIFCCSRMRFSEIPMKLAGLLQHPDPIVINHMISVDPNDQKKTACYDIDVEVDDPLKT
QMSSFLSSTTNQQEIAALETKIHETIEYINQLKTERDFMLSFSNNPQDFIQDWLKSQCRD
LKLMTDVTGNPEEERRTEFYQAPWMTEAVGRYIYSKVQQRRQELEQVLGIRLT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagagggaacttcgcgggtccgaccgtgagccccatgaacgtcgggctcgcc
gccgccttgaggatgcccgggatcccgccggccgcgacgagctacccgcgctccgtgagc
accgcgccgcagtacccccagcgtccagggatgccgctcggcagagtctcgggccccctg
ggctcaatggggggtcagctccccggtccttcctactgcggcagcggcgtgcccgcgcgg
cccggcatgcggcctcctgccgccgcggacaattcgcgaaagcgcttatttcatcaccag
cagcagcagcagcagcagcaagaggcgcttggaggccaccggcgaggggctaaaagacgc
aagatggccgacaaagttctaccacagagaatccgtgacctggtcccagagtctcaggcc
tacatggacctcctggcttttgagaggaaactggatcagaccatcgcccgtaagcgcatg
gagatacaggaggcgataaagaagcccattatgcaaaagcgcaagctgaggatttacatt
tccaacacgtacaccccgtgcaagcccgacggcaacgaggccgacaaggtgtcctcctgg
gaactccgagtagaggggaagcttctggaagaacctggcaagcagaagaggaagttctcg
tctttctttaagagcctggtgatcgagctggataaggagctgtacgggcccgacaaccac
ttggtggagtggcaccgaatgcccaccacccaggagacggacggtttccaggtgaaaagg
cccggcgacgtcaacgtcaaatgcaccctcctgctcatgctggaccaccaggtgcgcgcg
ctcttccgcgccgtccccctttcaaacttaacgtgttcaattgccgttttgaatgttgtt
gttgttgtttttcttccccgaattcagcctcctcagtacaaactggatctgcgactggcc
cggctgctgggcgtgcacacgcagacgcgggccagcatcatgcaggcgctttggctctac
atcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaatcactat
ttcaggaagatattctgctgcagtcgcatgaggttctccgagattcccatgaaactggcc
gggctgctccagcaccccgaccccatcgtgatcaatcacatgatcagcgtggaccccaac
gaccagaagaagacggcgtgctacgacatcgacgtggaggtggacgacccgctcaagacc
caaatgagcagcttcttgtcgtccaccaccaaccagcaggagatcgccgcgctggagacg
aagattcacgagaccatcgagtacatcaaccagctgaagactgagagagacttcatgttg
agcttcagcaacaatcctcaagatttcatccaggactggctcaaatctcagtgcagagat
ctgaagctgatgacagacgtgacgggaaatccagaagaggagaggaggaccgagttctac
caggcaccatggatgacggaggcggtcggcagatacatttattccaaagtgcagcagaga
cgacaagaactggagcaggttctcgggatcagactcacttaa
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