Syngnathoides biaculeatus (alligator pipefish): 133495888
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Entry
133495888 CDS
T09681
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04020
Calcium signaling pathway
sbia04080
Neuroactive ligand-receptor interaction
sbia04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133495888
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133495888
04082 Neuroactive ligand signaling
133495888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133495888
Ion channels [BR:
sbia04040
]
Ligand-gated channels
Glutamate (ionotropic)
133495888
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
133495888
NCBI-ProteinID:
XP_061666915
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All DBs
Position
22:9366839..9404408
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AA seq
1380 aa
AA seq
DB search
MAASRGNPAPSPWPPLFPVLLIASLGTLHARPLLLHSSINVAVVFSGSSYQSEVRGRLSG
ENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATERLHGVVFEDDVGSEPSTQVAEVAQ
ILDFLSTQTALPIVGVSGGSAVVIPYKAEGSSFLQMGASLEQQVLCMFKIMEEYDWGEFA
IITSLLPGYDTFVDIVQSYTDTSYFMWDLQDVLTMEMSVGANDMRTRRILQQVDSQVLLV
YCSFEEAHFLFRQAFEVGLVGPGYIWMLPSSAVGNPEVPPPASFPVGVIGVITEQWRKSL
RQRVREGVAIVAKGAESFKKQRGFIPEGHGDCTKPAKHSSNNTLFRHMLNVTWERRDLSF
NSRGFLSNPSMVIIALDRERMWDKVGTYSRGILQVRYPVWPRYGNFLEHVTDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNHSESIIGHSESYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSL
VSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKY
NQKGVEEALDSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRLIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSMLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDHGRSSGLAKPDLTS
NYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEHFSRHSGLPVRVPHVAAETVPRGFA
YVMENHAKFPQQSISPQRCMSRPTPLRYTLPTHSTSCLYERPLPVSSLSSPHLAVSETLP
LPHPRHYQTTGRLYVDAHPHSRFISCTDLQLPDIYTSHPVPLPQNQHTETGIHQRKQRSK
SFQCGEGDAERRKHKDHEKNKICLSELKANHLQGNHISAPSMESIYSVGRTCPPVENYRS
WPPEDLMLRGSRRGRRASFLKATWGSEQIHQLDESQSSLSSQSPSTLPDLFPCILTPTTA
VKAHNPAHLRNNLCLPRNQAYLHIREDHRRPPGRKGQRLRYSQSTHLPTYGEAVRYGARL
GPGMVRRATSLLSRQYGHYLNSHPGLPLYHSPLNLQNHNQPPGSHPAASPVCQLLGCGGG
RCGGRRALLYQDSVYGAYGIYQSSHTESETQGSQGGVNQAAGSPCILQPWKRVSSLESEV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccaggggaaaccctgcaccttctccctggcccccgctcttccccgtcctg
ctcattgcctccctgggaaccctgcacgcccggcccctcctcctgcactcgtccatcaac
gtggcggtggtgttcagcggctccagctaccaaagcgaggtccgaggccggctgagcggc
gagaactttgtcgacctgcctgtggtggtgagccccgtgacggtgctggtcaacgacacc
aacccgcgcgacctgctcacccgcctctgcgacaccatggcgacggagaggctgcacggt
gtggtgtttgaggacgacgtcggctcggagcccagcacacaggtggctgaggtggcgcaa
atcctggacttcctgtcaacacagacggctttgcccatcgtgggcgtcagcggcggctca
gcggtggtcatcccatacaaggcggagggatcgtcattcctgcagatgggagcgtctctg
gagcagcaggtcctctgcatgttcaagatcatggaggagtacgactggggcgagtttgcc
atcatcaccagcttgctaccgggatacgacaccttcgtggacattgttcagtcgtacaca
gacacatcctacttcatgtgggacctccaggacgtcctgacaatggagatgtccgttggg
gccaacgacatgaggaccaggcgcattctgcaacaggtggactcccaggtgctgctggtt
tactgctctttcgaggaggcgcacttcctgttccgccaggcattcgaggtgggcctggtg
ggtccgggctacatttggatgctgcccagctcggccgtgggcaaccccgaggtgccgcca
cctgccagcttccccgtgggcgtcatcggcgtcatcacagagcagtggcgcaagagcttg
cggcagcgggtgcgtgagggcgtcgccatcgtagccaagggcgccgagagcttcaagaag
cagcgtggcttcatccccgagggacacggcgactgcaccaagcccgccaagcactccagc
aacaacacgctcttcaggcacatgctgaacgttacgtgggaaaggagagacctgtcgttc
aacagccgggggtttctctcaaacccttctatggttatcatcgccctagatcgagagaga
atgtgggataaggtgggcacttacagccgcggcatcctgcaggtgcgttaccccgtgtgg
ccgcgctacggcaacttcctggagcacgtgacggatgatcgccacctgactgtggccacg
ctggaggagcaccccttcgtgatggtggagaacgtggaccccggcacaggcacgtgcgtc
cgcaacaccgtgccgtgcaggcgccagtcaaatcattcggagagcatcatcggccactca
gagtcatacaccaagctctgctgcaaaggtttctgcattgacatcctgaagaagctctcc
cgcaccatcaaattctcctacgatctctacctggtcaccaacggcaagcacggcaaacta
gtgcgtggcatttggaacggaatgatcggtgaggttgtgtacagacgcgccgacatggcc
atcggctccctcaccatcaacgaggagcgatctgagatcatcgatttctccgtgccgttc
gtggagacgggaatcagcgtcatggtcgcccgcagcaacggcaccgtctccccgtccgcc
ttcctcgagccgtacagtccggccgtgtgggtcatgatgttcgtcatgtgcttgacggtg
gtggccgtgacggtgttcgtgttcgagtacttcagtccagtcggttacaaccgcagcctg
gtgagcgcgaaagctccgggaggcccgaccttcaccatcggcaaatcggtttggctgctg
tggggcatcgtgttcaacaactcggtgcctatcgaaaaccccaagggcaccaccagcaag
atcatggtgctgatctgggccttcttcgctgtcattttcctggcgtcgtacaccgccaac
ctggccgccttcatgatccaggagcagtacatcgacacggtgtcgggactctccgacaag
aagttccagaagccacacgagcattacccccccttccgcttcgggacggtcccgaacggc
agcacggagcggaacatccgcagcaactatcccgacatgcacacacacatgatgaagtac
aaccaaaaaggggtggaggaggcgcttgacagcctaaaaaccggaaagctggacgcattc
atctatgacgcagccgtgctcaactacatggcgggcaaggacgaaggctgcaagctggtg
accatcggcagcggcaaagtgttcgccaccaccggctacggcatcgccctgcagaaggac
tcgcgctggaagaggctcatcgacctggcgcttctgcagttcctcggcgacggtgacacg
caacgcctggagaccgtgtggctctcgggaatctgccagaacgagaagaacgaggtgatg
agcagcaagctggatatcgacaacatggccggcgtcttctacatgctgctggtggccatg
ggcctcagcatgctggtgttcgcctgggagcacctactctactggaagctgcgccactcg
ctccacaagtcgcacaagctggacttcctgttggccatcagccggggtatttacagttgc
ttcaagggagtggaggatcatggccgttcctctggtctggccaaacccgacctgacatcc
aactacgcccaagccaacatgctaaagatgttgcgaactgccaaggacctggtctccacc
gccaatgtggagagctccctggacaatgccacgaagacaattgaacacttcagccggcac
agcggcttgcctgtccgggtcccgcatgttgcagccgagaccgtacctagaggttttgcg
tatgtcatggagaaccacgcaaaattcccacagcaatccatctccccgcagagatgcatg
agcaggcccacgccgctgcgctacacacttccaactcactctacttcctgtctgtacgag
cgcccacttcctgtctctagcctcagcagcccacatctggcagtcagcgagacgctaccc
cttccacatccccgccactaccagaccactggaagactctacgtggatgcccacccacac
tcgaggttcatctcgtgcaccgacctgcagctgcctgacatctacacctcccatcccgtc
cccctgcctcaaaaccagcacacagagacaggcattcaccagaggaaacaaaggtccaag
agcttccagtgtggggagggcgatgccgaaaggaggaagcacaaggatcacgagaagaac
aaaatctgcctcagcgagcttaaagcaaaccacctccagggcaaccacatctcagcccct
agcatggagagcatctactcggtgggcaggacgtgtcctccggtggagaactacagatcc
tggcccccggaggacctcatgctgaggggaagccgcaggggacgccgtgcctcattcctg
aaagccacgtggggcagtgagcagattcatcagctggatgagtcccagtcatctctttct
agtcagtcgccatccacacttcctgacctgtttccatgcattctcacgccgactacagct
gtaaaggcccacaacccagcccacctccggaacaacctgtgcctccctcgaaaccaggcc
tacctccacataagggaggatcacaggagacctcctgggcgtaaaggccaacgtctgagg
tattcccagtccacccatctcccaacatacggcgaggctgtccggtacggagccaggtta
gggccgggaatggtacggagagccaccagcctgctcagcagacaatacggccactacttg
aactcccatcctgggctaccactctaccactcgcccctcaacctgcaaaaccacaatcag
cccccaggcagtcacccggcagccagtcccgtgtgccagcttctgggctgcggtggggga
cgatgcgggggtcggcgggccttgctgtaccaggacagtgtgtacggagcttatgggatc
tatcagagctcccacactgaatcggagacacaaggaagtcagggaggagtcaaccaggca
gcggggagcccctgtatcctccagccctggaaacgggtgtccagtttggagtcagaggtg
tga
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