Syngnathoides biaculeatus (alligator pipefish): 133495903
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Entry
133495903 CDS
T09681
Symbol
spop
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133495903 (spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133495903 (spop)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
133495903 (spop)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
133495903
NCBI-ProteinID:
XP_061666937
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Position
22:complement(15228946..15238096)
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AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVDSHPHLVAEAYRSLALAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtcccgagtccccctcccccggcggaaatgtccagcgggcctgtcgctgag
agctggtgctacacgcagatcaaagtagtgaagttctcgtacatgtggaccatcaacaac
ttcagcttctgccgcgaggagatgggcgaggttatcaagagctccaccttctcctcgggg
gccaacgacaagctgaagtggtgtttgcgcgtcaatcccaaaggtctggacgaggagagc
aaagactacttgtcgctctacctgctgctggtcagctgtccgaaggccgaggtccgagcc
aagttcaagttctccatcctcaacgccaagggggaggagaccaaagccatggaaagccag
cgggcgtatcgcttcgtgcaggggaaagattggggctttaaaaagttcatccggcgagac
tttctcctcgatgaagccaacggtctcctgcccgacgacaagctcacgctcttctgcgag
gtgagcgtggtgcaggactcggtcaacatatccggccagaacaccatgaacatggtgaag
gtccccgactgccgacttgccgacgagctggggggcttgtgggagaactcccgcttcacc
gactgctccctgtgcgtggccggccaggagttccaggctcacaaggccatcctggcagca
cgctcgcctgtgttcagtgctatgtttgagcacgagatggaggagagcaaaaagaaccgc
gtggaaatcaacgacgtggagccagaggtctttaaagagatgatgtgtttcatttacact
gacaaggcccccaacttggacaagatggccgacgaccttctcgctgcagctgacaaatac
gccctggagagactgaaggtcatgtgcgaggacgcactgtgcaccagcttgtccgtggag
aacgcggccgagatcctcatcctggccgacctgcacagcgccgaccagctcaaaacgcag
gcggtcgacttcatcaactaccacgccgctgaggtgatggagacggcgggctggaagtcc
atggtggattcccatcctcacctggtggccgaagcgtaccgctcgctggccttggcccag
tgcccgttcctcggaccgccacgcaagcgcctcaaacaatcctaa
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