Syngnathoides biaculeatus (alligator pipefish): 133495960
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Entry
133495960 CDS
T09681
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133495960 (mms19)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133495960 (mms19)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133495960 (mms19)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
133495960 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
INTS7_N
API5
HEAT_ECM29
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
133495960
NCBI-ProteinID:
XP_061667030
LinkDB
All DBs
Position
22:complement(8287956..8302407)
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AA seq
1028 aa
AA seq
DB search
MAEESTVLVSLVEEFVAGLQDSKAKDAAAGLKNGEFTVLQLVEALGVSLTSTQPQTRARG
VKLLSEVLQECYGDLTEKEVEVLIAFYENRLKDHYITTPPVLQGLRTLTQCQTLPPGSAV
SILKSLFQDVHVQSLLLADRACVYKMLINIMDTREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIARKIIYRGYNLGKFTEELFEVTSCYFPIDFTPPPNDPHGITREELIQELRCV
LTGTPKFAEFLLPLIIEKLDSDVQSAKLDSLQTLAACVALYEHKDLAEFLEGLWASLRRE
VFQTSSEKIELAGLAALTAITSCLSRKILNSDCDDALSAFLDMVLKDCKHHLSEPDLKLV
WPSAKLLQAACRASYRASHIVTAAVMPALIEQYNSRNQCSQRRTLLEVMQRFVLSVKGSE
SAENEEQVLSGICPSLCYVTFAALSETNSSLQITATSVLSSLAKQTGLLSSSQIELAVDH
LARLVLSDEGDDVSLAVVGCAGGLAELHPTVFITNMIPRIKRVIFSESMEQDGDSTQDTQ
PGVRQRCLSMLAAVSTKPSVAQESTPVLLEVLGAAHSGKVGFSLEDAVLACRSLKRIAEL
VEDTEDSGRCFHDIIIPQLLSLALQAALQVENSSTHPSPLAAEVFLSTMVAVISTACSRL
QSELAGQTAERFVSLFLDGDVSFLPGNSFPSHIKLLANQHGGSWKQSQMVCLLMGCVCSL
PRTVMVPQIERLLLELEEMSCTCSHPMSYTSAAKCFAGLVNKMPQGDFLDNVLQKTMTRI
LSELDLAASSVRMQAYTLMIWVAKALLLRYHPTCTTLTDKMFSLLDDADLGPTAADGFSL
LMSDSTDVLSRDCHADVRIMYRQRFFSENSAKLVQCFNAAPQEKKPNYLKALSNIVNKLP
KQVQVTELPALLSLLLEALTYPDQGVQLSTLSCLEPVIADPPPVLIQQLEALVGRLLPLM
SSPTMNVKIASLRCIYALSRFPEHEVLPFRARVLRALATPLDDKKRLVRREAVQARGEWF
LLGSPGGR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaagtaccgtgctggtgtcactggtggaggaatttgtcgcgggattgcag
gacagtaaagccaaagacgctgccgcaggtctaaaaaatggagagtttactgttctgcag
ctagtcgaagcattgggagtgagtctgactagtactcagcctcaaactcgagcaagagga
gtcaagctgctgtccgaggtgttgcaagagtgctatggagacctcaccgagaaagaagtt
gaagtgctcatagcgttctatgagaaccgtctgaaagaccattacatcaccacacctccc
gtcttacagggactcagaacattgacacaatgccaaacgttacctcctggctcagccgtt
tccatattgaagtctttgtttcaggatgttcatgttcagtcactgctgttggctgacaga
gcgtgtgtttataagatgctcatcaacatcatggacaccagagaggctgaactgaaggga
ttgggagcagacttcgtatttggttttgtccagtcgatggacggtgagcgggaccctcgc
aacctcctcttagccttccaaattgccaggaagattatctacagaggttacaatctaggt
aaatttacagaagagctttttgaggtgacgtcctgctatttccccattgacttcacccca
ccccccaatgaccctcatggtatcaccagagaagaattgatccaagaactgaggtgtgtc
ctcacagggactcctaaatttgctgagtttctgttgcccctcatcatcgagaagctcgac
tcagacgttcagagtgcaaagcttgactctcttcagacactggctgcatgtgtggcactg
tatgaacacaaggacttggcagaatttcttgagggattgtgggcgtcactccgcagagag
gtgttccaaacgtcaagtgaaaagatcgagttggcgggcctcgctgctctcactgccatc
acttcctgcctttctcgaaagattctcaactcagattgcgatgacgccctcagcgccttc
ctggacatggttctcaaagattgcaaacatcacttgagcgagcctgacctgaagttagtg
tggcccagcgctaaactactccaggctgcctgcagagcctcctacagggcgagtcacata
gtaacagcagctgttatgccggcgctcattgaacagtacaatagcagaaaccagtgttct
cagagacgtacattattggaggtgatgcagaggtttgttctgtctgtaaaaggcagtgag
tcagcagaaaacgaggagcaagtactttcaggcatctgtccatcgttgtgctacgtcacc
ttcgcagctctgtcagagactaacagcagcctgcagatcacagccacatctgtgcttagc
tcactagcaaaacaaacaggtttgctgtcaagctctcaaattgagctagctgtcgatcac
ttggcccgactggtgctgtcagatgaaggcgatgatgtcagtcttgctgtggtgggatgt
gctggaggcttggcagaattgcacccaactgttttcatcactaatatgatcccaagaata
aagagagtaatattttctgagtctatggaacaagatggagattccacacaagacacacaa
cctggagtgcgtcagcgctgtttgtctatgctagcagcggtgtccaccaagcccagtgtt
gcacaggagagcacacctgtactcttggaagtcctcggagcagcacattctggcaaagtc
ggtttctcattagaggacgccgtgttggcgtgccgcagcctaaagaggatagctgagctt
gttgaagacaccgaagactctggacgatgcttccacgacatcattatcccacagctgctg
tcactagcactgcaagcagcgcttcaggttgaaaattcatccactcaccccagtcctctg
gcggcggaggtgtttctgtccactatggttgctgtcatcagtacagcctgctccaggctg
cagtctgaattggcaggtcagacggctgaaagatttgtgtcactcttcctggacggggat
gtttcctttttgcctggcaactcttttccttcacacatcaagctgcttgcaaatcagcat
gggggttcgtggaagcagtctcagatggtttgtctactgatgggatgtgtttgttcgcta
cctcgcactgtgatggtaccacaaattgagcgcctgcttttggagctggaagagatgagt
tgtacctgcagccacccgatgtcatacacctccgctgctaagtgctttgctggcctggtc
aacaagatgcctcagggtgactttcttgacaatgtacttcaaaaaacaatgaccaggatc
ttgagtgagttggacttagcagcttcaagtgtccgcatgcaggcgtacacgctcatgata
tgggttgccaaggctctgcttctccgctaccacccaacatgtacaacactgactgacaag
atgttctcactgctggacgatgccgatctgggtcccacggcggccgacggcttctcactg
ctgatgagcgactcgacggatgtcctaagccgcgattgccatgcggacgtgcgcatcatg
taccgccaacgcttcttcagcgagaactcggccaagttggtgcaatgtttcaatgcggct
cctcaagagaagaaacctaactatctgaaggccctgtccaacatagtcaacaaactaccc
aaacaggttcaagttacggaactacctgcgctgctgtcactgctgctggaggccctgact
tatccagaccaaggcgtccagctgtccaccctctcctgtctggaacccgttatcgctgac
ccacccccggtgctcatccaacagctagaggctctggttggcagactcctgcccctcatg
tcctctcccacgatgaacgtgaagatcgcatcactgcggtgcatctatgccctttcccgc
ttccctgaacatgaggtgttgccatttcgggcccgagtgctgcgtgccttggccacacct
ctggacgacaagaagaggctggtgaggagggaggcggttcaggcacgaggagagtggttc
ctcttgggaagtcctggaggaaggtga
DBGET
integrated database retrieval system
