Syngnathoides biaculeatus (alligator pipefish): 133495962
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Entry
133495962 CDS
T09681
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133495962 (vps35l)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Others
Retriever complex
133495962 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF3446
Motif
Other DBs
NCBI-GeneID:
133495962
NCBI-ProteinID:
XP_061667032
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All DBs
Position
22:complement(8267283..8280084)
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AA seq
967 aa
AA seq
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MAAVMWRSRMRNYDAELQRARLEVVPIEFSEYHPLKTILVTDSKPLRGTRKGSTSSSSSS
SSSAAPDPLSSMLDGTDPLSMFAAETPYTTHIAFAGDARKKGEKENEPVGADFEPWSMKR
GEILARFTTTEKLSINLCMGSDKDFPNSQNPGSSAVSEKVRNRLEELDDLEEGSQRELLN
LSQQEYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDIL
DTFGRLVYDRIWSMCSDPKPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLYVEAS
ILKCNRFLNKSGVEETLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPSLKDSLKRNFF
DLLGTFRQISEESVRNQLIVQRVEMPEYLTLYSPAINWILQCSAYRAPETLLTEMMERCK
KLGNNALLLNSVMRAFSPEFVATRATDFIGMIKDCDEAGFPKHLLFGSLGRCLACADPPE
LERLTILNEAWKVITKVRSPRNYINCAEIWVEFTCRHFTKREVNTVLGDIIKHMTPDRAF
EDAYAQLQSVIRKILAHFHDFTVLFSMERFLPFLDMFQKDSVRVEVCRSIMDVFIKHQLE
PTRDPVILNAMMHICKTMHDSVNALTLDDEKRSLSVLIIGFMRVVSFGRDFEQQLSFCVE
ARATFCNLEPVLVQLIHTVNQLAMETRRVMRGNHSRKTAAFVRACAAYSFITIPSLSSIF
SRLHLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFINNF
LSTLLVVPDHPEHGVLYLVRGVLNMVQDYTWEDNSDAKVRVYICALPLLAAMSQESYLYT
IPKMDSNETLYGGDPKFLSEINKLCETLIGQILDNLKVLGREELQPTTRRQGTLAFSLFC
VLLTHGDLRNNKLSQLAVNLWNLSHKNGYCETRVSVRTLEYIKHQAQQADMSHLSEMVQR
LALQSRA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgatgtggcgttcccggatgcgcaactatgacgctgagttgcagagggcc
cgtctggaggttgttccaatagaattttcggaataccatcccctcaaaactattttggtg
acagacagcaaacctctccgtggaactcgtaagggcagcacctcttcctcttcgtcgtcc
tcttcctcagcggcgccagaccccctcagctccatgttggacggaactgatccgctgtcc
atgttcgcagccgagacgccatatacgacgcacattgcctttgccggggatgcaaggaag
aagggggagaaggagaacgagccagtgggagcagactttgagccctggtcgatgaagaga
ggggagatcctggcgaggttcaccactacggaaaaactctcaattaatttatgcatgggc
tctgacaaagatttcccaaattcccagaatcctggatcctctgctgtctctgaaaaagtc
cgcaatcgtctggaggaactggatgatctggaagagggttcccagagggagctgctcaat
ctttcccagcaggaatatgccaatcgcatcgaggagctgaaccagtccctgaaagaggcc
tgggcctctgaccagaaggtcaaagccttaaagatcgttatccagtgctccaagcttctc
tctgacacgtctgtgatccagttttaccccagcaagttcgttctcatcactgacatactt
gacacttttggccggctcgtttacgacagaatttggagcatgtgttcagacccaaaacct
ttaccggactcattcacagttgatgatgtcaatgacacggcgaaggagacgtgcctcaac
tggttcttcaaaattgcctccattagggaactgttacccagattatacgtcgaagcctcc
atcctgaagtgcaatcgcttcctgaacaaatctggcgttgaggaaactctcccgcggctg
accgcaatgatcagaggaattggagatcctttggtggcagcttacacccgagcttacctg
tgcagggttggcatggaggtcgcacccagtttgaaagacagcctaaagcgcaacttcttt
gacctgctcggaaccttccggcagatcagtgaggagagtgttcgcaaccagctgattgtg
caaagggtggagatgccagagtacctgacactctattcgcccgccatcaactggatcttg
cagtgtagtgcttacagagctccagagactctccttacagagatgatggagagatgcaag
aagctgggtaacaatgccctcctgctgaattctgtgatgagggcattcagtcccgagttt
gtcgccaccagagctacggacttcatcggtatgataaaagactgcgacgaggctgggttc
cccaagcacttgttatttggatcactgggtcgctgtctggcctgcgctgaccctccagaa
ttggagaggctgacgatcctcaatgaagcttggaaggttatcaccaaagtccgcagtcct
cggaattacatcaactgtgctgaaatctgggtcgagttcacctgccgacatttcacaaaa
cgcgaggtgaacaccgttctgggagacatcatcaagcacatgacccctgaccgggccttt
gaggatgcctatgctcagctgcagtctgtgatcaggaagatccttgcccacttccacgac
ttcaccgtcctcttctcaatggagcgtttcctcccatttctggatatgttccagaaggac
agtgtgagagtagaggtgtgcaggtccattatggacgtcttcatcaaacaccagctcgag
ccaaccagagaccctgtcatcctcaacgccatgatgcacatttgcaagaccatgcatgac
tctgtcaacgctctcacgcttgatgatgaaaaaagatctttgtctgtactgatcattggc
tttatgcgtgtggtttcattcggcagagacttcgagcagcagttgagtttctgtgtggag
gccagagccaccttttgtaacctggagccagtactggtgcagctcattcatacagtgaat
cagctcgcgatggagaccaggagggtgatgagaggcaatcactctcgcaaaacggccgca
tttgtccgagcatgtgctgcctacagttttattaccatcccatcacttagcagcatcttt
agccgtctccacctctatcttctgtctggtcaggttgcgttggccaaccagtgtctatcc
caggcggatgcctttttaaaggcagcggtcagcattcttccggaggttccgcgctcgatc
agcgtggaagggaaacttcgctcttcagagagtttcctgctcgacttcatcaacaacttc
ctctctaccctactggttgttccggatcacccggagcatggcgtgctctacttagtccgt
ggtgtgctcaacatggtgcaggattacacctgggaggacaacagtgatgccaaagtgcgc
gtctacatctgtgccctgcccctgctggccgccatgagccaggaatcatacctgtacacc
attccaaaaatggactccaatgagaccctttacggtggggacccaaagttcctgtcagaa
attaacaagctgtgtgagaccttgatcgggcagatcctggacaacctgaaggttctcggt
cgagaagagttgcagccaaccacacgccgtcaagggactctggcattctctctcttctgt
gttttgctcacccacggagacctgaggaacaacaagctgagccagctggctgttaacctg
tggaacctcagccacaaaaatggatactgtgagacgcgagtttctgttcggacactggaa
tacataaagcatcaggctcagcaggctgacatgtctcacctgtcggaaatggtccagagg
ctcgcattgcagtcccgcgcctga
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