Syngnathoides biaculeatus (alligator pipefish): 133496306
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Entry
133496306 CDS
T09681
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00100
Steroid biosynthesis
sbia01100
Metabolic pathways
Module
sbia_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
133496306 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbia01006
]
133496306 (fdft1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
133496306 (fdft1)
Prenyltransferases [BR:
sbia01006
]
Terpene biosynthesis
Squalene/phytoene synthase
133496306 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
133496306
NCBI-ProteinID:
XP_061667694
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All DBs
Position
23:6430401..6434895
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AA seq
448 aa
AA seq
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MAAAACCKCPVSLAAFKRSLSVAAGPRSLLSGRRPCVARPSGGARTTAATAAGFDRSTAS
CCVSCQESMSHSLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMS
IPLDRKVPMLHQFHTYLYQDAWSFGESREKDRQVLEDFPTISLEFRNLAQEYREVITDIC
RRMGVGMAEFLEKKVGSMKEWDKYCHYVAGLVGVGLSRLFSASRLEDPEVGWDADLANSM
GLFLQKTNIIRDYLEDTKEGRAFWPQEAWSQFAGRLEDLAQPEKLESALSCLNLLVTDTL
RHVPDVIAYLARLRNQSVFNFCAIPQVMAIATLCSCYNNPLVFQGVVKIRKGQAVTLMME
ATNLPAVQNIIGRYGQEIARKVSPGDPSRAETLRVLALIREKSRPSGPPVRSHHLSPVYL
SAAMLLAAVSWQYLSATAAQGAADVQGR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggcgtgctgcaagtgtcccgtgtcgctggccgcgttcaagcgctccttg
tcggtggccgccggtccccgctcgctgctgtcgggccgcaggccgtgcgtcgctcggccg
tcgggcggcgcgaggacgacggcggcaacggcggctggcttcgatcgttccacggcttcg
tgttgtgtgtcgtgccaggagtccatgagccacagcctgcggacgtgctacgtgtacctg
aaccagaccagcaggagcttcgcggccgtcattcaggccctggacggcgagcttagacac
gccgtgtgcattttctacttggtgctgcgcgcgctggacacggtggaggacgacatgagc
atcccgctggacaggaaggtccccatgctgcaccagttccacacgtacctgtaccaggac
gcctggagtttcggcgagagccgcgagaaggaccggcaggttctggaggacttccccacg
atatctttggaattccgaaatctggctcaagagtaccgggaggtcatcacggacatctgc
cgccggatgggagtcggaatggccgaattcctggagaagaaagtcggatccatgaaggag
tgggacaagtattgccactacgtggcggggctggtcggcgtgggcctgtcccgcctgttc
tcggcgtcgcggctggaggaccccgaggtgggctgggacgcggacttggccaactccatg
ggcctgttcctccagaagaccaacatcatccgagactatctggaggacacgaaggaggga
cgtgccttctggccgcaagaggcgtggagtcagttcgcgggccgtctggaggacttggcg
cagcccgagaagctggaatcggcgctgtcgtgcctcaacctcctggtcacggacacgttg
cgccacgtgccggacgtcatcgcctacctggcccgcctccgcaaccagagcgtcttcaat
ttctgcgccatcccacaggtgatggcgatcgccacgctgtgctcgtgctacaacaacccg
ctggtgttccagggcgtggtgaagatccgcaagggccaggccgtcacgctcatgatggag
gccaccaacttgccggccgtgcagaacatcatcggccgctacggccaagagattgcgcgc
aaggtctcgccgggcgacccctcgcgggccgagaccctgcgcgtcctggcgctgatccgg
gagaagtctcggccgtccggcccgccggtcaggagccaccacctgtcgcccgtctacctg
tcggccgccatgctgctggccgccgtcagctggcagtacctcagcgccacggcggcgcag
ggtgccgccgacgtgcagggacgctaa
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