Syngnathoides biaculeatus (alligator pipefish): 133496313
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Entry
133496313 CDS
T09681
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133496313 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133496313 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133496313 (srsf5b)
Spliceosome [BR:
sbia03041
]
Common components
Common spliceosomal components
SR proteins
133496313 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
133496313
NCBI-ProteinID:
XP_061667704
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All DBs
Position
23:complement(17058978..17067045)
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AA seq
377 aa
AA seq
DB search
MSGARIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDARDAEDAVYELDGK
ELCNERVTIEHARGRLRAGRGGGGGGRGGGGGGAGGGGGGHFPDRYGRGAQNNRSRNPPP
MRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEK
LSGKEINGRKIKLIEASKRSRSRSRSRSSSRSHSGSRSRSRDRSSSGSPRRSGSPRRSGS
PQRSGSPRRSGSPRRSGSPRRSGSPRRSGSPRRSGSPRRSGSPRRSGSPRRSGSPRRSGS
PRRSGSRSPAKTRSRSRTRSPSGNASSPNTKSLDPNKSSVSPTAPALSSHDKEPVSRSRS
CSRSRSRSRSPSAESQH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagctcgtatattcatcggccgactaaacccttcggccagggagaaggatgtg
gagagatttttcaaaggatacggacgtatccgggacatcgacctgaagagaggctttggc
tttgtggagtttgaggatgccagagatgctgaagatgctgtgtatgaactcgatggcaaa
gaactttgtaatgaaagggtgaccatcgagcatgctcgtggacgtctgcgtgctggcaga
ggaggaggaggaggaggaagaggaggaggtggtggtggcgccggtggaggaggaggcggc
cacttccctgatcgttatggtcgaggcgctcagaacaatcggagtcgaaacccacctccg
atgcgcaccgagaaccgcctgattgtggagaacttgtcctcccgtgtcagctggcaggac
ctgaaagatttcatgaggcaagctggagaggtgacatttgcagatgcacatcgacctaaa
ctcaatgaaggggtggttgagtttgcttcttacagcgacctgaaaaatgcccttgagaaa
ctgtctggaaaggagatcaatggcaggaaaatcaagctcattgaggcgtccaagaggtcg
cgaagtcgttcccgctccaggagttcatctcgctcccactctggctcacgctcccggtcc
cgtgatcgctcttcatccggcagtccccggcgctcgggcagtccccgacgctcaggcagt
ccacagcgctcgggcagtccacggcgctcgggcagtccacggcgctcgggcagtccccgg
cgttcgggcagtccccggcgttctggcagtccccggcgttctggcagtccccggcgttct
ggcagtccccggcgttctggcagtccccggcgttctggcagtccccggcgttctggcagt
ccccggcgttcgggctccagaagcccagccaaaacccgcagtcgctcccgcactagatcc
ccctctggcaatgcatcctcccctaacaccaaatcactggatccaaacaaatcctccgtg
tctcctacagctcctgctttgtcttctcatgataaagagcctgtctctcgttcccgttct
tgttctcgctctcgctcccgctccaggtctccttccgctgaaagccagcattaa
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integrated database retrieval system
