Syngnathoides biaculeatus (alligator pipefish): 133496341
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Entry
133496341 CDS
T09681
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133496341 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133496341 (rbm25b)
Spliceosome [BR:
sbia03041
]
Complex A
U1 snRNP components
U1 related factors
133496341 (rbm25b)
Complex B
133496341 (rbm25b)
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
133496341
NCBI-ProteinID:
XP_061667771
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All DBs
Position
23:12268395..12283026
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AA seq
840 aa
AA seq
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MSFPPHLNRPLLPPPGIPPQYAGFPAGAPMIPVHMGIMTPSPVIVSSLPVVSKPPVHRKD
DEAGPTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAFGFCEYKEPEST
LRALRLLHDLSIGDKNLLVRVDPKTEAQLDEWKAKKKSANGKADSDNGDSQEEVLDEETL
KKDQVVKGAIDGLMREYADELSAPSQDEDALRRKRKKDKKDEDDLNAIDMEDDKRDLITR
EISKFRDTHKKREEEKDKREKERLEFEREKREREKVRERERERRDREKEKERERERERER
ERDKDRERRIKERERDWERDRSRDKSAPRSHSREKSRDREREKKRDHGDEEQVHERRRLE
RKLRDKEAAYQERLKNWELRERKKARDYAKDLEREDERQREMETFQHGGERSDRHTSPQN
REPNAPSFAFISLNCDPTWYADPAHYMKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLR
DREKEVEVDERDRKREKEELEKIRQRLLDEGHPDPDAELRRMEEEEEERARRPPAVREAQ
PEEPREQRRRASRDHRGDHRDHRENHSGHQDRAEHRLHPARSEDEDAEEGEDGGYDEEDD
PEVKPCLKPTMRPITAAPSVSSASGNGSPDTPGNESPCGIIIPHENSPPDALPPDENRPK
IGLSLKLGATGSPSQPNAGKRKKLPVDSVFGKFEEEEADEQPRKRKLVPLDYDDEKSLGA
DGAKGPNSEEKRKHIKSLIEKIPTAKPDLFSYPLDWSMVDTTLMERRVRPWINKKIIEYI
GEEEPTLVDFVCSKVMAHGTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccccccacatttaaaccggccactgttgccccctcctggaatcccccctcag
tatgctggcttccctgcaggagctccgatgatcccagttcacatgggcatcatgaccccc
agccctgtaattgtatcgtctctacctgtggtcagtaaacctccagtccatcggaaggat
gacgaggccggccccacaaccacggtgtttgtggggaacatatctgaaaaagcctcagac
atgctgatccgacagctgctcgcgaagtgtggaatagtcctcagctggaaaagagttcag
ggagcatcaggcaagctacaagcatttgggttttgcgagtacaaagaaccagagtccaca
ctacgagccctgcggcttcttcatgacctttcaattggcgacaaaaaccttcttgtgaga
gtggatcccaaaacagaagcacagttagatgagtggaaggccaagaaaaaaagtgctaat
gggaaagcggactcagacaatggagacagtcaagaggaggttctggatgaggagacactg
aagaaggatcaggtcgtcaaaggtgcgattgatggattaatgcgggaatatgctgacgag
ctcagcgctccttcccaggatgaagatgccctgcgtcgaaagagaaaaaaggataaaaag
gacgaggatgacttgaatgcaatcgacatggaggacgacaagcgagaccttattaccaga
gagattagtaaatttcgagacactcacaagaaacgggaggaggagaaggacaagcgggag
aaggagcgtctggagtttgagcgagagaagcgcgagcgagagaaggtgcgcgagcgcgaa
agagagcggcgggatcgcgagaaggagaaggagcgcgagagggagcgggaacgggagcgc
gaacgagacaaagaccgcgagcgccggatcaaggaacgcgagcgtgactgggaaagggac
agaagccgggataaaagtgcccctcgcagccactcaagagagaagagccgggaccgagag
cgagaaaagaaacgagaccacggcgatgaagagcaggtgcacgaacgacggaggctggaa
cgtaagctccgagacaaagaagcagcctatcaggagcggctaaaaaactgggagctcagg
gagaggaagaaagcacgggactacgccaaagatctcgagagggaagatgagcgccaacga
gagatggagacttttcagcacgggggggagcgctcagaccgtcacaccagtcctcagaac
cgtgagcccaacgcgccctcttttgcattcatttccctgaattgtgatcccacgtggtac
gctgatcctgcacattatatgaaagaaggcaaacggctaaaagagttcctggaagattac
gacgacgacagagatgaccccaaatattacaggggcagtgcactgcagaagcgcctcaga
gacagagagaaggaggtggaggtggatgagcgtgacaggaagagagagaaggaggagctg
gagaaaatcagacagcggctgctagacgagggacatccagacccagacgcggagctacgc
aggatggaggaggaagaggaggagcgagcgcggcggccccccgccgtccgagaagcgcaa
cccgaagagccgcgggagcagcgccgcagggcgtcgcgggaccacagaggcgaccaccgg
gaccatcgagaaaaccacagcgggcaccaagaccgagcggagcatcgtctgcaccccgcc
cgctcggaggacgaggacgcggaggagggcgaagacggcggttacgatgaggaagacgac
cccgaagtcaaaccctgcctcaagcccaccatgaggcccatcacggcggccccctccgtg
tcttcggccagcggcaacggctctccggacacgcccggcaacgagtcgccgtgcggcatc
atcatcccgcacgagaactcgccccctgacgcgctgcccccagacgagaaccgaccaaag
attggcctcagcctcaaattgggcgcgaccgggagtccgagccagcccaacgcgggcaag
aggaagaagctgcccgtcgacagcgtcttcggcaagttcgaggaggaggaggcggacgag
cagccgcgcaagaggaagctggtgcccctggactacgacgacgagaagagcctgggggcg
gacggcgccaaggggcccaactcggaggagaagcgcaaacacatcaagagcctcatcgag
aagattcccacagccaagcccgacttgttctcctaccctctggattggtccatggtggac
acgacgctaatggaacgacgcgtgcggccgtggatcaacaagaagatcatcgagtacatt
ggagaggaggagcccacattagtggacttcgtctgctccaaggtgatggcccacggaacc
ccgcagggcatcttggatgacgttgcgatggttctggatgaagaggccgaagtcttcatt
gtgaagatgtggcggttgctcatctatgaaacagaagccaagaagattggcctggtaaaa
tag
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