Syngnathoides biaculeatus (alligator pipefish): 133496359
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Entry
133496359 CDS
T09681
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133496359 (lama4)
04518 Integrin signaling
133496359 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133496359 (lama4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
DUF8567
Synaptonemal_3
Tsc35
P-mevalo_kinase
Motif
Other DBs
NCBI-GeneID:
133496359
NCBI-ProteinID:
XP_061667807
LinkDB
All DBs
Position
23:1592696..1717555
Genome browser
AA seq
1886 aa
AA seq
DB search
MTDRGKNPLGKKKQNMAAKAMRSLCLFGILIGMAYSSSVVGYGTEPQMSLKICGKGFFLS
EQNKCLPCNCKGHADRCEDITGICLNCMDHSMGDFCEMCEDGYMLAPSKVGNHSCQLCAC
PLSVPSNNFAVHCDRQGDIQRCKCKEGYAGHICERCAPGYYGMPMAIGGSCKRCDCNDNS
DPNLIFNWCHNVTGHCQHCWGNTAGRNCERCAKGFYGDAIGAKNCRECECSKCGTSSCDD
RTGVCHCKPGVTGRLCDRCEDGYSGFSSCQGCQRCECRPASLRPTCHSLTHSCLCRRGAG
GRYCERCLPGYWDYSPSGCKRCDCESSHCDMQTGECLPEPATVNLCNISCDECIWHVIGD
LRLSNKTLDHLRVGVLNISTGAAVNDRVKYYNYTAHHLQNQFYMWRNKLSVIETETRGLE
DSTQDVVSFIRHLSVSESTVKRLGIQIDEDTQQTIRLAENFSKNLTDLNMHIEEMIHEWE
LYSVDHKASPEVVRKNTDEALHIVSNMRKLHLSTQGPITIEESTESHDLLRRIRQLEKKS
LITHGHLTPLKLALSRFTTKLSDAQSFLQNATSTIEETQDRNRGNVLKFQRNEAAKQRME
TEFAATQNSTEKAKDIITISEENVAEVDTLVENITQYLAAIDGASQKLIAKMEKLSSADI
DLMQRADEHAEELERQATKLEEDLRKSDANGFVQKAISAANVYTNIVKYISDGNITTLAT
VNLSHTANDSVTEIHMKLNDLVAKCESVFKESVSLHSEQREVEAEVVDKVKYIEETKETL
DKNTQKLEEMVQDINEIQTARTNQRLEYTLKVAEGTLNRSAAVLDTITPIGNKVEEWADN
LSKNKYSTSGYEQAIISAKESVDHLHFLVPELLDKLKVVEQKKPVNNITVNVMRIRELIA
QARSVAKKVQVSMKFNGQSSVEIHADTNLEDLKAVTSISLFMRVDPDKDPIEDRFILYLG
DRNGRKDYMGLAIKNDNLVYMYNLGGEYVEIPLSSKPVSQWPAVFNYIKVERLGRHGKIY
LIIPSQRSTDEQKFIQKGESPGTDSLFDIDPKDMVFFVGGVPPDASLPPPLALAPFVGCI
ELASLNNDVISLYNFKNTHKMDVVASTPCSRYKLAFSQSRIASYLFDGKGYALINKIERR
GKFGYVTRFDISVRTVANDGVLFIMVNADNFFLLDIKNGFLRLMYDFGFNDGPKLLEDNI
PKLKINDARYHEISVIYHQSKKVILLVDKSHVKSMENPKTTLPFSDIYIGGAPSHILQSR
SELFAVVGLKGCVKGFLFQKKDFNLLEEPGTIGISSGCPEESFASHKAYFMGESYLGSSA
KISPFDKFEGGLNFRTSEASGLLFYHIEGPDEFSITLENGAVVMNTQGTRVKTHKKHYND
GRTHFLLASVNNQRYLLLLDDKDKQEKKRPQLITRPSSISQVNNFYFGGSPSSSLRNFTG
CITYAYINRHDRDIEPEDFQRYNENVQTFLQDCPLQKLPAALSSRPRDDKYQTKQRQSRK
VRRNAPIHNVMELRSDSDVKVSPCHLSSSHQATHGGYQYSSFPNNRQHYEALPESFSERS
NFSLSLKTKTSFGLIFYVSDFEENNFMTLFLSSGRLVYVFNVGYQQVEMWSKESYNDGEW
HNVMFLRDGNMGKLIIDGLTVLEDKVTGNVVSWHVSSPLYFGGVPPKRAQRNIQRNSVNS
FSGCLKNIQLNGRWFSSADKTFGVTPCFEGLTETGTFFAEEGGYVLLDTLDLGSTFELEM
EVQPRVTSGVLLHVDIAEGYFSMYIHKGAVLVVLSDGAHVLLATVSPRQGLCTGHWHRIA
VMRDMDVLKLQVDHEVHSVDGFLNLHSTSTRNIFIGGDPHPSLTGRHVTNEPYVGCMRNL
MIDNSGISFRDAALVSGAVSVGSCPT
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagaggaaaaaatccacttggaaaaaaaaaacagaatatggctgctaaagca
atgcgctccctctgcctttttggtattctcattgggatggcctattcatcttctgttgtc
gggtatggaacagagccacagatgtctttgaaaatttgcggtaagggatttttccttagt
gagcaaaacaaatgtttgccctgtaactgcaaaggccatgcagatcgctgtgaggacatc
acaggcatttgtcttaattgcatggatcacagtatgggtgatttctgtgaaatgtgtgaa
gatggctacatgcttgcaccaagcaaggttggtaaccatagttgccaactctgtgcttgc
cctctctctgtcccctcaaataattttgcagtccactgtgacaggcagggtgacattcaa
cgatgcaagtgcaaggaaggttatgctggacatatctgtgagaggtgcgcccctggttac
tacggcatgccaatggcaattggtggttcctgcaagcgctgtgactgtaatgacaactct
gacccaaacctgatctttaattggtgccacaatgtgacaggacactgccaacactgctgg
ggtaacactgccgggcgaaattgcgaaaggtgtgcgaaaggcttctacggcgatgccatc
ggtgccaagaactgcagagagtgtgaatgcagtaaatgtggtacatcctcatgtgatgac
aggacaggagtgtgtcactgtaaaccaggtgtcaccggacgactctgtgaccgctgtgag
gatggttactcaggtttctccagctgccaaggctgtcagagatgtgaatgtaggccagct
tctcttcgtcccacctgccattctctcactcacagctgtctgtgccgccggggtgccgga
ggtcgttactgtgagaggtgcctcccaggctattgggactatagcccctctggctgcaag
agatgtgactgtgagagcagtcactgtgatatgcaaacaggagagtgtctcccagagcct
gcaacagttaatctctgcaatatcagttgtgatgaatgtatttggcatgttatcggcgac
ctacgactgtccaacaaaacactggaccatttgagggttggagtcttgaacatctctact
ggggctgctgttaatgacagagtcaaatactataattacactgctcaccacttgcagaat
caattttacatgtggagaaacaaactgtctgtgatagaaacagagactcgggggttagaa
gactccacacaggatgtggtatccttcatcagacaccttagtgtatcggaaagcacagtg
aagaggctggggatccagattgatgaggacacacagcaaaccataaggctagctgaaaac
ttcagcaaaaacctcactgacctcaacatgcacattgaagaaatgatccatgaatgggag
ttgtatagtgttgaccataaagcgtcacccgaagtggtcaggaaaaacacagatgaagcc
ttacatattgtgagcaacatgaggaaacttcacttgtccacacaagggcctatcactatt
gaagaatcaacagaatcacatgacttgctaaggcgcattcgtcagttggagaagaagtca
ttgattacacatgggcatctcactccactcaagttggctttgtcccgcttcactaccaag
ctgtctgatgcacaatccttcctccagaatgctacaagtacaattgaggagacacaggat
cggaatagaggaaacgtgctcaaattccagaggaatgaggcagcaaagcagaggatggaa
acagagtttgcagctactcaaaacagtacggaaaaagcgaaagacataattaccatatca
gaagagaatgtggctgaagtggatacgttggttgagaatataacacaataccttgctgca
attgatggtgccagccaaaagctgatagcgaagatggaaaagctctcatccgctgacata
gacttgatgcaaagggcagatgagcatgctgaagagctggaacgacaggcaactaaactg
gaagaggacctgcgaaagagtgatgccaatggctttgtgcaaaaggccataagcgctgcc
aatgtctacaccaacatagtgaaatacatcagtgatggcaatatcacaacacttgcgaca
gtgaacctatcccacacagcaaatgattctgtcactgagatccacatgaagcttaatgat
ctagtggcaaagtgtgagagcgtttttaaggagtctgtttcattgcattctgaacaaaga
gaggtagaagctgaggtggttgacaaagtcaaatacattgaagagacaaaggaaaccttg
gataaaaacactcaaaaacttgaagaaatggttcaggatattaatgaaattcagacagcc
agaactaatcagagactggagtacacactaaaggtggctgagggaactcttaaccgatca
gcagcagtgcttgacaccattacgcctatcggtaacaaagtagaggagtgggccgataat
ctgagcaagaacaaatactcgacatctggctatgagcaagccataatctctgcaaaggaa
tcagtggatcaccttcattttcttgttcctgagctcttggataagctgaaggtggttgag
cagaagaagcctgtgaataacataaccgtcaatgtcatgagaatcagagaactcatagcc
caggctagaagtgtggcaaagaaggttcaagtgtccatgaagttcaatggtcagtcttca
gtggagatacatgctgatacaaacctagaagatcttaaggcagtgacgtccatcagccta
tttatgagagttgaccctgacaaggatccgatagaagatcgtttcattttatatttggga
gacagaaacggtaggaaagactacatgggacttgccatcaagaatgacaacttggtgtac
atgtataatctaggtggtgaatatgttgaaatcccgctgagttcaaaacctgtcagtcaa
tggcctgctgtcttcaactacataaaagtagaaaggttgggtagacatggaaaaatctat
cttatcataccaagccagagatctacagatgaacagaagttcattcagaaaggcgaatct
ccaggaaccgattcactttttgacattgacccgaaagacatggtgttctttgttgggggt
gttccaccagatgccagtcttccaccacctttggctcttgctccatttgtgggctgcatt
gagttggcttcgctgaacaatgatgtgatcagtctatataatttcaaaaacactcacaaa
atggatgtggttgcatcaacaccatgttccaggtacaagctggctttttcacagagtcgt
attgctagctatttgtttgatggaaagggctatgcactgatcaataaaatagagaggagg
ggaaaatttggttatgtcacaagatttgatatttcagtgcgaacagttgcaaacgatggc
gtccttttcatcatggtcaatgctgataatttttttcttttagacataaaaaatggattt
ttgcgtctaatgtatgactttggcttcaatgatgggcctaaacttttggaggataacata
ccaaaattaaaaataaatgatgcaagatatcatgagatatcagtaatctaccatcagtca
aagaaggtcatccttctggtagacaagagccatgttaaatctatggagaatcccaaaact
actctgcctttctcagatatctacatagggggggctccctcacacattctccaatctagg
tctgagctgttcgccgtggttggtctcaagggttgtgtcaaaggctttctgttccaaaaa
aaagactttaacctcttagaagagcctggcaccattggcatcagtagtggctgccctgag
gagtcttttgcatcacataaagcctatttcatgggtgagagctacttgggatcctcagca
aagatttcaccatttgataaatttgaaggaggcctcaactttcgaacatcagaagcgagt
ggactacttttctaccatattgaagggcctgatgaattcagcattacgcttgagaatgga
gcggtcgtgatgaacacacaaggaacaagagttaaaacacataagaagcactataatgat
ggaagaacgcacttcttattggcttcagtgaataatcagaggtatttattattgttggat
gataaagacaagcaggagaagaaacgtccacaattaatcacaagaccctcctccatttct
caagtaaacaacttctattttgggggatcaccaagcagcagtttaaggaacttcacgggc
tgcattacctatgcctacataaacagacatgatcgagacattgagccagaagactttcag
cgctacaatgagaatgtccagactttccttcaggactgtccactgcaaaagcttcctgct
gctctttcatcaaggcccagggatgacaaatatcaaaccaaacagaggcaatcccgtaag
gttcgcaggaatgcacccatccacaatgtaatggagctaagaagtgacagtgatgtgaag
gtttctccctgccatctctcctcaagtcatcaagcaacacatggtggctaccaatacagc
agctttccaaataataggcagcactatgaagctctcccagaatccttttctgaaaggtct
aacttttcgttatctctaaagaccaagacatcatttgggcttatcttttatgtctctgac
tttgaagagaacaactttatgacactcttcctgtccagtggtaggcttgtttacgtcttc
aacgtaggttatcagcaagtcgaaatgtggagcaaggaaagttacaatgatggagaatgg
cataatgtaatgtttttgcgtgatggaaatatgggaaaattgatcatcgatgggctcaca
gtgctagaggacaaagttacaggcaatgttgtgtcctggcatgtcagcagccccctgtat
tttgggggtgtgcctccaaagcgagcacaaagaaacattcagagaaactcagtaaacagc
ttttctggctgtttgaagaatattcagctcaatggacgctggttttcatccgcagacaaa
acatttggggtcactccatgttttgagggactcactgagacaggaacattctttgcagag
gaaggaggctatgtacttttggacacacttgacttgggatctacatttgaactagagatg
gaggtgcagccccgtgtgacatcaggtgtacttctccatgtggatattgcagagggctat
ttctctatgtacatccataaaggagcagtgctggttgttttgagtgacggagcacatgtt
ttattggcaacagtttctccaagacagggtctttgtactggccactggcatagaattgca
gtaatgagagatatggacgttctcaagttgcaagtagaccatgaggtccatagtgtggat
ggatttcttaatcttcactctacaagcaccagaaatattttcataggtggagatccacat
ccctcccttacaggcaggcatgtaaccaacgaaccttacgtaggttgtatgaggaacctg
atgatcgacaacagcggcattagcttcagagatgcggctctggtcagtggagctgtcagc
gtgggatcctgtccaacttga
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