Syngnathoides biaculeatus (alligator pipefish): 133496410
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Entry
133496410 CDS
T09681
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03250
Viral life cycle - HIV-1
sbia04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133496410 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133496410 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133496410 (samhd1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133496410 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
133496410
NCBI-ProteinID:
XP_061667954
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All DBs
Position
2:complement(1399267..1409525)
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AA seq
612 aa
AA seq
DB search
MERRKRNLATEINPGNSFRTPEKRMSLARSPDSDISGWGIEETCRYLQEEGLGEWESVFK
EHKIDGVALRYLKKEDLGEMGIKPLGDQLRILHSLGKLWHIEEGPQTNKVFNDPIHGHVE
LHPLLVRIIDTPQFQRLRNIKQLGGTYFVFPGASHNRFEHSIGVGYLAGQLVKALDERQP
ELLITRRDMLCVQIAGLCHDLGHGPFSHLFDAKFIPKARPNYAWKHEKASLDMFDHLVNK
NHLKPLMEKHGLVLPEDLIFIKELITGPLDTNEDSQWAYRGRAKEKSFLYEIVANKRNGI
DMDKWDYFARDCHNLGIQNNSDYRRYLKFARVCEADGQRLICTRDKEVGNLYDMFYTRNC
LHKRAYQHRVGNIIETMITEAFLKADKHIQVQGSDGKMFTLSTAIDDMEAYTKLTDHVFE
QILHSSNPKLAEAQQILQNILYRRLYKFVGQTQPKKSLKVTQEMLHAWEANLAKSIPQTG
ALAVTLLPEDFVVSVIQMDYGMKKENPIDNMRFYCKTDPTKAVKIRKHQVSKFLPAHFAE
QLIRVYYKKMDDEGLVAAQKHFVQWCMNKDFIKPQDGDVIAPELTPLKQSWDCRQEETDD
EDLPCKMTLFQD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcgtaaaagaaatttggcgacggagattaaccctggaaatagtttccgaacg
ccggagaagagaatgtcactggcgcgttctccagactcggacatctccggttggggaatc
gaagaaacctgccggtacctacaagaagaaggtcttggagagtgggaatctgtttttaaa
gaacataaaatcgatggtgtcgccctgcgatatcttaagaaggaggaccttggggagatg
ggcataaagcctcttggtgaccaactgcggatcctgcacagcctgggcaagttgtggcac
atagaagagggtcctcaaacaaataaggtgtttaacgaccccatccacgggcatgtggag
ctccatccccttcttgtccgaatcatcgacacgccacagttccaaagactccgaaatatc
aaacagttgggagggacctactttgttttccctggagcgtcccacaaccgcttcgagcac
tccatcggagtgggttacttggcaggacaacttgtgaaagcgctggatgagaggcaaccg
gaacttctcattactcggagagacatgctttgcgtgcagatcgctggactctgtcatgat
ttgggacacgggccgttttctcacctgtttgatgccaaatttatccccaaagcgcgtcct
aattatgcctggaagcatgagaaagcatcgcttgacatgtttgatcacctggtgaacaaa
aatcacctgaagccactgatggaaaaacatggcctggtcctccctgaagacttgatcttc
atcaaagaactgatcacaggacctctggacacaaatgaagactcccagtgggcctatcga
ggccgtgcaaaggaaaagtccttcctctatgaaatcgtggccaacaagagaaatggtatt
gatatggacaagtgggactactttgccagggactgccacaacctgggcatccagaacaac
tcggactatcggcgctacctcaagtttgcgcgggtgtgtgaggcagacggtcagaggctc
atttgcactcgtgacaaggaggtgggcaacctctatgacatgttctacacacgcaactgt
ctccacaagagggcctaccaacacagggtaggcaatatcatagaaaccatgatcactgag
gcctttttgaaggccgataagcacattcaggtccaaggctcagatgggaaaatgttcacg
ctctctacagccatagatgatatggaggcctacaccaagttgacagatcatgtgtttgag
caaatactccactcatcaaacccaaagctggccgaggcacagcagattctgcagaacatt
ctttataggcgcctctacaaatttgtgggtcaaacccaacccaagaaatccctaaaggtg
acccaggaaatgcttcatgcctgggaggcgaacttggccaagtcaatccctcagactggc
gctctcgctgtgactctgctacctgaagactttgtcgtgagcgtcattcaaatggactac
gggatgaagaaggagaaccccattgacaatatgcgcttctattgcaagactgaccccacc
aaagctgttaagatacgcaagcatcaggtgtcgaaatttcttcctgcgcactttgctgag
caactgatcagagtttactataagaagatggacgacgagggcctggttgcagcccagaag
cactttgtgcagtggtgcatgaacaaagacttcataaaacctcaggatggagatgtaatt
gcacctgaactgactcccttaaaacaaagctgggactgcaggcaagaagaaacggatgat
gaagatttgccatgtaaaatgaccctttttcaggactag
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