Syngnathoides biaculeatus (alligator pipefish): 133496421
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Entry
133496421 CDS
T09681
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133496421
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133496421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_TSHZ3
AbiJ_NTD3
DUF494
HTH_24
HTH_26
NOC3p
HTH_31
Motif
Other DBs
NCBI-GeneID:
133496421
NCBI-ProteinID:
XP_061667979
LinkDB
All DBs
Position
23:complement(20909515..20960573)
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AA seq
497 aa
AA seq
DB search
MSDFSEEPRFTIEQIDLLQRLRRSGMTKQEILHALETLDRLDREHGDKFGRRTSSSSSSS
SSYMVGGTNSCTNNSASNNTASATTTSSVTCNGAINNGEASVGDHSATTASSITSKISTA
TQTQFGSNGGLSPALSNTYDTSPPPAPPPSSTILPSPVSLVALSQNGRDSLAATPNGKLS
PPRYPVNSAAAARTFGFEAIEEDLDVDDKVEEMMRRDSSMVKEEIKAFLGNRRISQAVVA
QVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRPAPLPMEEMEWRQ
TPPLVTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACNAVIQKPGK
KLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHSNSDDVDGNDFT
EQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSATHSEHQDPISLAVEMAAVNHTILALS
RTGGVPNDIKTEVLEDD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcagcgaggagccgcgctttactatagagcagatagatctgctgcagcgg
ctgcgtcgctccggcatgaccaagcaggagatcctccatgcactcgaaactctggaccgg
ctggaccgggagcacggcgataagtttggtcgtcgcacctcatcctcctcctcttcctcc
tcctcctacatggtaggcggaacaaacagctgcaccaacaactctgcctccaacaacact
gcctcggcaactaccacctcttccgtgacgtgcaacggcgccatcaacaatggcgaagcc
agtgttggcgaccactccgctaccactgcttcctctataacctccaagatatctacagcc
acacagacacagtttggcagcaatggggggctctcgcctgctctcagtaacacctatgac
acctccccgcccccagcgccgcctccctcctccaccatccttccttcacctgtctctttg
gttgcactgtcacagaatgggcgtgacagtctagctgccacgcccaatggaaagttgtct
cctcctcggtaccctgtcaacagcgccgcagcagcaagaacctttggatttgaggctatc
gaagaggaccttgatgttgacgataaagtggaggagatgatgaggagggatagcagcatg
gtgaaagaggagattaaagcattcctggggaaccggaggatctctcaggcagtggtggct
caagttaccggtatcagccagagcagaatctcccattggctgctgcagcatggctctgat
ctgagtgagcagaagaagagggccttttaccgctggtatactctggagaaaaccactcct
ggtgcaactttaaacatgcggcccgcgcccttgcctatggaggagatggagtggaggcaa
acacctccactggtcactgctccaggaaccttccgacttcggcggggaagccgtttcact
tggaggaaagagtgtctggccgtgatggagagctacttcaatgataaccagtacccggat
gaggccaaaagggaggaaattgccaatgcctgcaatgctgttattcagaaaccagggaag
aagctatctgatttggagagggtcacctccctcaaagtttacaactggtttgcaaaccgc
cgcaaagagataaagagacgagctaacattgaagccacaatcctggagagtcatgggata
gatgtgcaaagtccagggggacactccaacagtgacgacgttgatgggaacgattttaca
gaacaggcatgtgatctgccttattttgacaagagacctctcagccgaccatttggcctt
tatcggttagaacccacctcccctacacaggatgacagtgctacacacagcgagcaccag
gacccaatctctttggctgtggaaatggctgctgtcaatcacacaattctggccctatct
agaaccggaggagtccctaacgacatcaagacagaagtcctggaggatgactga
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