Syngnathoides biaculeatus (alligator pipefish): 133496466
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Entry
133496466 CDS
T09681
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133496466 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Other domain-containing proteins
Tubby family proteins
133496466 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Exonuc_VII_L
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
PAT1
Motif
Other DBs
NCBI-GeneID:
133496466
NCBI-ProteinID:
XP_061668076
LinkDB
All DBs
Position
23:complement(11644483..11672338)
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AA seq
1759 aa
AA seq
DB search
MFASVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRHTPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYPLQ
RVHSHKPLMTVSFTSGDLSLMNNYDDLSPTLIRTGLKDVVVQWCSQGDLLSVAGMEKTLL
SHDSSCFPPIRNAIVKFYNVRGEHIYTLETPAQRPITTLCWGHRDSRLFLACGPALYVVR
VEHRVASLQLLCQQGIATAVKEEKDVVKLSMPSRLCSYVTSAFIPTIKQPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KMDGKTDEIYGNSLISAMVDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRDLVCP
FTNRINIDPRKSPKLSRAAQEVSRSPRLPIRKPSIGSPSLTRREFPLDDITQQNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMEYINLPVFSP
NVFSEDEDDLPVTGPAGGADDNNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNV
QLDVLTNPTATSPGAAAAAAAAAVAGSDQNQDTVLTAQYTGPTRYSSPGQVIFGGLDMSR
LTVGASHSHQALQQQQQQQQQQQQQQLQQLQHHQQLQHHQQLQQQQQQMFQQQQQQQQLQ
QQLQHMQQQQHHQQQQFQQHILQQQLHHQQQMHQMQQQQQQQQQQIHIQIPVPSMPSAQT
SGTTMLPTAALQIQIPHPPSDPLVERGAAGEHESLLKIKTTRSGAQLSEADTVVFSTPPD
ISKMNPPPPYPGTVAAAVAAAAAAAAASMSASGAPSNVSLGTNGGTTGAPPPDLCAKKGD
IQLYPLSQQQSQYPTPLGYERITTFDSSGNVEEVCRPRTRIVCNQNVYSMQGPGSSATLR
VTSSSSSSSEGKKIQLPYSSATLNRLAAPRYSIPSGDPPPYPDSANQNSGRNSGQKLDSN
LIHATLRRNSREATLKVSQVIEPPRPLPLPPKAKNSSALAASYQQRVQTALYTCSQCSSG
SSLGVTAPGSANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSGPPLASQSSYSLLSSLEGS
GNTTGGGSGRDRIDYVNSAFTEDETLSQSLRHLALGGNDMSGLLVKHPPPYQWDPAATEE
VWVPQERTATLNPGPQKPPPLILSPAQHLDVSRLPYVLSPKSPTTPGAATFQAAAGYQIS
LQYPPATAYSGAHLQPILTSPRPCSSPKEVVAPVSLAQQDTTIVLSAGYPAGLANLACCP
LPPMYPGGNSCAGIPIPPIALHTPWGTYNSCPPIPSPAVPLPPKASHMGVDKNPLSPPPP
PPPPPPPPPPPPPHAELQNHAGLQEAMGETGEGFQEVLSLAESPVPPRSEKFSKKNRKRP
DGRPEEANVSKKEGRALGDFNTLISSPRLGGRDKKKVKGPKEQLKAKKLSKAAANSEFQD
SSESEQELFISGDELLNQCQSGKKGWKTKRNLRTASELEEMKCRKGNEKEDRGLGSQGFV
YVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYP
FSAVQAFAVALANVTQRLK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctccgtggagcacggtccggtcctctgcagcgactccaacatcctgtgcctg
tcctggaaaggccgcgtgcccaagagcgagaaggagaagccggtgtgccgaaagcgctac
tacgaggagggctggctggccaccgggaacggccgcggcgtcgtcggcgtcacgtttaca
tccagccactgcaggcgagaccggcacaccccgcagcgggtcaacttcaacctcagaggg
cacaacagcgaggtggtcctggtgcgatggaatgagcccttccagaaactggccacctgc
gataccgatggcggcatctttgtttggatccagtacgagggccgctggtccgtggagctg
gtcaatgaccgcggagctcaggtgagcgacttcacgtggtcccacgacggcactcaggct
ctcatctcttaccgcgacggctttgtgctggtggggtccgtcagcgggcagagacactgg
tcctccgagatcaatctggagagtcagatcacgtgcggtatctggacacccgacgaccag
caggttttgtttggcaccgctgatggacaggtgatcgtgatggactgccacgggcgcatg
ctggcccacattctgctgcacgagtcggacggcatcgtcagcatgtcgtggaactacccc
agcttcctggtggaggacagcagtgagagtgacacggattctgacgattaccctttacag
cgagtgcacagccacaaacctctcatgaccgttagcttcacctccggagacctcagcctc
atgaacaactacgatgacctctccccaaccctcatccgcaccggtctgaaagatgtggtc
gtccagtggtgttcacagggggaccttctttctgttgctggcatggagaagacgctcctc
tcgcatgactcgtcctgttttcctcccatcaggaatgccattgtcaagttctataatgtt
cggggtgaacacatctacacattggaaacaccagcacagcgccccatcaccaccctctgc
tggggccaccgggattcccgtctcttcctggcgtgtggcccggcgctctacgtggtgcgt
gtggagcaccgtgtcgccagcctgcaactcctctgccagcagggcatcgcgaccgccgtg
aaggaggagaaggacgtggtcaagctcagcatgccgtcacgcctgtgttcctacgtcact
tccgcttttatccccaccatcaagcagcccattccagaccccaacaacatgcgtgacttt
gtcagctacccaacagccggcaatgaacgtttgcattgtacaatgaagcgaacagaggac
aacccggaggtgggaggtccctgctacactctctatttggagtacttggggggtctggta
cccattcttaaaggacgacgaataagtaaactacgcccagaatttgtcattatggacccc
aagatggatggaaaaacagatgaaatatatggcaacagtctgatctcagcaatggttgac
agctgcaactgctcagactccagtgacatcgagctcagtgatgactgggtcggaaagaag
tctccaaagatatcccggggcagcaagtcccccaagctacccagagacttagtttgtccc
tttaccaacagaatcaacatcgatcccaggaaatcgccaaaactgtctcgtgccgcccaa
gaagtttccaggtcaccacggctaccaatacgcaaaccctctattggatcacctagtcta
acgcggagagaatttcctttagacgacattactcagcaaaactaccttgctcaggtcaca
tcaaatatttggggaacaaaattcaagattgtcgggctcgctgcatttttgccaacaaac
cttggtgcagtcatctacaaaaccagcctcctccacctgcagcccagacagatgacaatc
tacctgccggaggtgcggaagatctccatggagtacatcaacctgcccgtgttcagcccc
aacgtcttcagcgaggacgaagacgacctgcccgtcactgggccggccggcggcgccgac
gacaacaacccgccctgcactgtcaacattccaatcgcacccatccacagtcccgcccag
gccatgtcccctgcccagagtatcggccttgtccagtccctgctggccaatcaaaacgtt
caactggatgttctaaccaaccccacggccacctccccaggcgctgctgctgctgctgct
gctgcagcagttgctggttctgaccaaaaccaggacaccgtccttacagcccagtacaca
ggccccactcgatactccagccctggtcaggtcatctttggagggcttgacatgagtcgc
ctcacggtcggagcctcacactctcatcaggctttacaacaacaacagcagcagcagcaa
cagcagcagcagcagcagttacaacaactccaacaccatcagcaactgcagcaccatcaa
cagctacaacagcagcagcaacagatgttccagcagcagcagcagcaacaacagctacag
cagcagcttcaacacatgcagcagcaacagcatcaccaacagcaacagttccagcagcac
atactacagcagcagctccaccatcagcagcaaatgcaccagatgcagcagcaacaacaa
cagcagcagcagcagattcacattcaaatccctgttccctccatgccctcagcacagacc
tccggaacgaccatgctgccgacggctgcgctgcagatccagatccctcacccgccgtct
gatccgctcgtcgagaggggagccgccggcgaacacgagagcctcctgaaaataaagacg
acccgttctggtgcacagctgtccgaggccgacacggtggtcttcagcacgccgccggat
ataagtaaaatgaacccgccacctccctatcccggaactgtggccgctgcagtggcggcg
gctgctgctgcggcggctgcttccatgtcggcctccggcgcaccctcaaatgtctcattg
ggaacaaatgggggcaccactggagctccacctcctgatctctgtgcaaagaagggggac
atacaactgtatcccctaagtcagcagcaaagccagtaccctacaccactgggctacgag
agaatcaccacctttgacagcagcggtaacgtggaggaagtctgtcgtcctcgaacccga
attgtctgcaatcagaatgtctacagcatgcaagggcccggaagctctgcaaccctcagg
gtcacctcttcatcctcgtcgtcgtcagaaggaaagaagatccagttgccgtacagctcc
gccacactcaacagactcgctgcgcctcgctattccataccgagcggggaccctccccca
tatccagactcggccaaccagaatagcgggaggaactctggacagaagctggacagcaat
ctcatccatgccactctcaggaggaacagccgggaggccacccttaaggtgtcccaagtg
atcgagccgcccagaccgctaccgctgccacccaaagctaaaaatagcagcgctttagct
gcttcctaccagcagagggtacaaacggccttatacacttgcagtcagtgtagcagcggg
tccagccttggggtcacggctccaggcagcgccaacgggatagcagggggcaccataatc
agacaggattttcctccagggaacggagcgccacacagcacagtcatcgtacactccaac
agcggcccccccctggcctcgcagtcctcttacagcctgctcagttcactggaaggatcc
ggaaacaccacgggaggaggcagcggcagggaccggattgattatgtgaattcagcgttt
accgaggacgaaacactcagtcagtcactcaggcatttggcgttaggaggaaatgacatg
tcaggcctgctcgttaaacacccccctccttaccagtgggaccccgccgccacggaggag
gtttgggtccctcaggaacgaaccgcaacgctcaacccgggaccccaaaagccgccccca
cttatcctcagtccggctcagcacttagacgtgtccaggcttccgtacgtgctgtctccg
aagtcccccacaacgcccggtgccgcgacttttcaagccgctgccgggtaccaaatttcc
ctccagtatcctccggccaccgcctactcgggcgcccaccttcagcccatcctaacatca
ccgcgcccctgctcctccccaaaagaagtggtggcaccagtgtcgctcgcacagcaggac
acaaccattgtcttatctgccgggtacccggccggtctagccaacttagcctgctgccct
ctaccacccatgtaccccgggggaaactcttgcgccgggattcccattcctcccatcgcc
ctccacacaccgtggggtacgtataactcgtgcccccctatcccaagtcctgctgtgcct
ctaccaccaaaagcttcccatatgggggtagacaaaaaccctctttcaccaccaccgccg
ccgcctccacctcctccaccaccgcccccgccgccaccgcacgcagagttgcagaatcac
gcaggtttacaagaagccatgggggaaaccggggaaggtttccaggaagtgctatcctta
gccgagagccctgtgccgcccagatcggagaagttcagcaagaagaaccgcaagaggccg
gatgggcggccggaggaggccaacgtgtccaaaaaggagggcagggcactgggggacttc
aacaccctcatttccagtccacggctgggtgggagagacaagaagaaggtgaaaggaccg
aaggagcagctgaaggccaagaagctgagcaaggccgcagccaacagcgagttccaggac
agctcagagagcgagcaggagcttttcatcagcggggatgagctgctcaaccaatgccag
agcggcaagaaaggctggaagacgaagaggaacctcaggacggccagcgaactggaggag
atgaaatgccggaaaggcaatgaaaaggaggaccgagggctgggcagccagggcttcgtg
tacgtcatggcgaacaagcagccgctgtggaatgaggccacgcaggtgtatcagctggac
ttcggcggacgtgtcacgcaggagtctgccaaaaactttcagattgaacttgagggcaga
caggtgatgcagttcggtcgaatcgacggcaacgcctacatcttggactttcagtacccc
ttttccgccgtgcaggccttcgcggtggctctggcaaacgtcacgcaacgcctcaagtga
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integrated database retrieval system
