Syngnathoides biaculeatus (alligator pipefish): 133496512
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Entry
133496512 CDS
T09681
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133496512 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133496512 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133496512 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
CoV_S2
Motif
Other DBs
NCBI-GeneID:
133496512
NCBI-ProteinID:
XP_061668188
LinkDB
All DBs
Position
23:complement(14551174..14687144)
Genome browser
AA seq
3114 aa
AA seq
DB search
MTPLGTVLLTALLWQCGYSQQRGLFPAVLNLASMADITTNATCGLSGPEMFCKLVEHVPG
QPVRNPQCRICYQNSAKPYERHPIEYAIDGTNRWWQSPSIKNGMEYHYVTITLDLKQVFQ
IAYVIIKAANSPRPGNWILERSIDGLTYEPWQFFALTETECLTRFNMNPRTGPPSYTRDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLVFQRIRTLNADL
MTLTLHDPKDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNTVTKKFSCECEHNTCG
ESCDRCCPGYHQQAWMAGTFVTRHICEKCNCHGKAEECYFNQTVADLSLSLDVHGQYRGG
GVCISCRDNTDGINCQSCVAGYYRPAGVNAEEENPCIPCSCDSHGSDGQSCVEDSSRATP
SQPPGSCRCKEGFGGLRCDRCAIGYMGYPDCQPCNCSIEGSSNSDPCTSPCMCKENVEGE
NCSRCKVGFYNLQRDNPRGCEKCSCMGVASQCSASTWVYQNESTLTGWYLSGDSGRRVWP
IHRETPQYLSVHHGDVVENLGSAYYWNAPESYLGNKIPAYGGSIVYTVSYTIDQQEKIIR
VTSEPDFIIEGGGIKIMDRRYGLPVYPSSPSTNHIALLPENFLVFETAEPISRRDFLTVL
ANMTRIMVRASYCTEPSAVYRLHLFSMLVGYPNAKGEKTASAVEMCSCPPGYAGTSCEAC
VAGFRRVDGQLYNGVCEVCHCHGHATECHEVTGHCLDCSHHTTGPHCDTCQRGYYGVATH
GSAADCQPCTCPLGLPSNNFSPTCHIGEGGNLLCDQCQLGYTGPRCARCSNGYYGKPDVP
GDSCRPCDCHGNLDLSTPGSCDPITGQCLHCRHGYSGVACGSCDDGFFGDAIIAKNCQPC
RCHINGSVSEVCNKESGRCQCRENVVGRQCDDCMAQTFGLATGGQCVPCHCNSFGSKSFD
CDENGQCRCQPGVTGPKCDRCSRGFFNFQEGGCTPCLCSHVGNNCDANTGQCICPPNTLG
ERCDRCAPNHWGHDITTGCKECGCNLVGSVRQECNVNTGCCVCHDSFRGEKCDECQLGYR
DFPQCTTCECNISGSELETCDLERGVCACADRTGKCSCKENVMGDNCDRCKPNTFGLSLQ
NPLGCSKCYCYGLTHSCTESQGLIRMRLTLKPEQTVLPLVDKNSIVETRTGVSFKHPEIL
AHADLVTTVLSEPYYWKLPQQFRGSMITAYGGKLMYAVYYEARDEIGPSSYEPQVIIKGG
ANHNIVMTRHVVGLQIGQLTRHEIDMTEHEWRHADGRAMTRQDFMDVLFYVDYILIKASH
GSQMRNSHISEISLTVAEEGTPTGESVKAYQIEKCECPIGYSGLSCEECGAGFYRLRSGS
HTSAPASRVPTAAGMGSCVQCQCSGHSTTCDPDTSICQNCQDNTEGDHCERCVPGFYGLV
RGFHDDCRPCACPLTTPGNNFSPTCVTEGYDDYRCTSCPEGYEGKYCERCSTGYYGNPQI
PGGRCEESCDDECSGLLLNDMDRLYRIVTEITLTTPLPPPYKILYRFENMTEELKHMLSP
QKAPERLLQLADSNLGSLVVEMDQLHSRATKVSADGEQVEDDADRIQTRAEVLEKFIRDT
LLGAQDLQSKADELNRMLARKDGAPEKGLKETKEEIQTMLAEMRKRQLGDRQIIAEEEMD
LAEELFQKVKRMFGGPHQATEDLKAEIKGKLSDHQSKLQEAQDLLYSAREKTRLAGTLAG
QNQANLTFLERKHAAVLGVKQEAQKVLGEGETLLDDANQLSDVINKELEDAQEMSKDLGP
LNEQLHDKVRDLTDGLSGGGLAHRVHAAEDHAQQLNESAAILDGILAEAKNLSFNATAAF
KAYTNIKANVDEAEKEAKMAKQRVSEALTMALGPDIPMKEEAQSALQKSLKLLNQAKQLH
NDVKDNAATVSGLKGRVKASRDRTKDLLKAINGTMTTLSTIPNDTAAKLAATKAVAAEAN
ATAIDVLERLAVLNLQVSGIQKNFSQLADTVNTANKMIQDPEKNIHAAGAKVKDLEDEAD
RLMEKLKPIKKLEDNLRRNISQIKELINQARKQANSIKVSVSSGGDCLRSYRPDIRKGRY
NTIILHVKTTTPDNLLFYLGSAKYVDFLALEMRKGKVYFLWDVGSGVGRVEYPHVTINDG
NWHRIEASRNGLNGTILVYPLEGPRAGAVPTPSSANSPVTYTILDVDQNAYLFVGGILGT
IKKADAVRTTTFTGCMGETFLDGKPVGLWNYRDRQGDCKGCVVSPQSSNGEGTVQLDGEG
YAAVGRPTRWNPNVSSVTFKFRTFASDALLMYLATDDMKDFMSLELAGGKVKMNFDLGSG
VGSAISPNRQNDGRWKSLTMSRNKKHATVTIVDIDSSAEEKIAATSLGAATGLNLKEKQS
IYFGGLPTVGNYRPEVMLKRYVGCLREIEVSRTPYNLLSSSDYTGVTKGCNVENLYMVSF
SKPGYVELGGLSLAVGTELSLSFSTLVDTGTLLLAVGGAPPLSQQVRNKNAISKRKRRQS
GEPFLSVMLNKGSLEVLVYTGSHSLRRVIRRPEQGILSDGREHSLRIERLPGRSFAVQVD
EEAKREAPLPNDQPISLHRVFLGGIPAELEQTSNRANIPFQGCIWNLMVNSVVSDFSQAV
SFDSAEIGQCPNLAPLPPLPYPTEEAQKEKDAAKPDLAAPTPVPVTWPPVLPAEPTALVL
PAAPPTATLTSAEAPPTADTDACPSAVAPVALEKAYQFGLSRNSHMSFAFDDAKVRERLI
LEFELRTQEESGLVLYMARINHADFVSIQIKDGQVCLGYDLGHGNTSGCVPFSINDGSWH
KIRVVRSKQRALLVVDGRYSKQMISPKKADLLDVVGALYVGGLPHNYTTKRIGPILYSIN
GCMRHLKMVGGPVSTKAAATGRTETHTEDFELDMATPTSGHMVGRCFPATEAGTYFDGTG
FLKAVSNYRVGLDVSIALEFRTSRTNGVLLAISNQGNDGLGIEIVQGQLLFHVDNGAGRI
TAMHAPDGDGFCDGRWHAVVAVKARHRVELLVDGKMSQAQSPNARSNTCDTNDPIYVGGY
PDGVRQAALTGRTSFRGCMRNLKITKASKVMEVHFDKALEVAGVQPLSCPAGAA
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgctcgggacggtgctccttaccgcgttgctatggcaatgcggctactcgcag
caaagagggttattcccggctgttttgaacttggcatccatggcagatattacaaccaat
gctacgtgcgggctgtctggaccggagatgttctgtaaactagtggaacatgtcccaggt
cagcctgtaagaaacccacaatgtcgaatctgctatcagaacagtgcgaaaccatacgag
cgtcaccctatagaatatgccattgatgggacgaaccgttggtggcagagtccctccatc
aagaatggaatggagtaccactatgtgaccataacactggacttgaaacaggttttccag
atagcctacgtgatcattaaggctgccaactcgcctcgacctggtaactggatcttggag
cgttcaatagacggtttgacctatgaaccgtggcagttcttcgccctcacagagacggaa
tgtctgaccagattcaacatgaatccaaggacaggacctccgtcgtatactagagatgat
gaagttatctgcacatctttctattccaagatccacccattggagaatggagagatccac
acttctttaatcaatggtcgtccaagtgcggatgacccttccccgaccctgctgaacttc
acctcagcacgctacatcaggctggtctttcagaggatccgaacgctcaacgcggacctc
atgacgctgacgctgcatgaccccaaagatatcgatcccattgtgacaagacggtactac
tactccattaaggatatttcggttggagggatgtgcatctgttatggtcacgcaaaggcc
tgtccactcaacactgttaccaagaagtttagctgcgaatgtgaacacaacacatgcggg
gagagttgcgatcgttgttgccctggttaccaccaacaagcctggatggctggaaccttc
gtcactcgacacatttgtgagaagtgtaactgccacgggaaggctgaggaatgctacttt
aatcagactgtcgcagacctttcgctcagcctggatgtccacggccagtaccgagggggc
ggagtgtgtatttcatgccgtgacaacacagatgggatcaactgtcagagctgtgttgcc
ggctactacagacctgccggtgtgaacgctgaggaggaaaacccctgcatcccatgctca
tgcgactcacatgggtctgatggccagtcctgtgttgaggactcaagccgggcgacacct
tcccagccaccagggtcatgccgttgtaaggaagggtttggcggtcttcgatgtgacagg
tgtgcaattggttacatgggctacccagactgtcagccatgtaactgcagcatcgaggga
agcagcaacagtgacccgtgcacttcaccctgcatgtgcaaggagaatgtggagggagag
aattgtagccgctgcaaagtgggcttctacaatctccagcgcgacaatccgcgcggatgc
gagaaatgctcgtgcatgggcgtagcgagccagtgctctgcctccacgtgggtttatcag
aatgagagcacactgactggctggtacctgagtggagattcaggacggagggtgtggcct
attcacagagagacgcctcaatatctaagtgtccaccatggcgatgttgtggagaacctc
ggctctgcttactactggaatgcacctgaatcgtacctgggaaacaagataccagcctat
ggagggtcaatcgtctacactgtctcttacactatagatcagcaggaaaagattattaga
gtcacttcagaaccagacttcatcattgagggcggcggaatcaagattatggacagacgg
tacggactacctgtatacccatcctcgccgagcaccaatcacatcgctctccttccggag
aacttcctggttttcgagactgctgagccaatcagccgcagggactttttgactgtgttg
gcaaacatgaccagaataatggtcagagcctcttactgtacggaacccagtgctgtgtac
agacttcacttattctcgatgctggtaggttatcccaatgccaaaggagagaagacagca
tcagctgttgaaatgtgctcttgtccacccggatatgccggaacatcctgtgaggcttgt
gttgctggattccgaagagtggacgggcagctctacaacggtgtgtgtgaagtgtgtcat
tgtcatgggcatgccacagaatgccacgaggtcacagggcactgcctggactgttcccac
cacaccacaggcccccactgtgacacctgccaacgtggttattacggcgttgccacccac
gggtcagccgcagattgtcagccctgtacctgccctctcggtttgccaagtaacaatttc
agcccgacctgccacattggtgagggaggaaatctgctgtgtgatcagtgtcagcttgga
tacaccggaccaagatgtgccaggtgttccaatgggtattacggaaaacccgatgtcccg
ggagactcctgccggccctgtgattgccacggtaacctggacctgtctaccccgggcagc
tgtgatccaatcacaggccagtgtctgcactgtcgacatggttacagcggcgtggcttgc
gggagttgcgacgacggtttctttggagacgccatcattgcaaagaactgccagccctgt
cggtgccatattaatggctccgtttcggaagtctgcaataaggaaagcgggcgatgccag
tgcagggaaaatgtggttggacgtcagtgtgacgactgcatggctcagacattcggactc
gctacaggtgggcagtgtgtgccgtgtcactgtaactcctttggctccaagtcgtttgac
tgcgatgaaaacggtcagtgccggtgccagccgggtgtcaccggacctaaatgtgatcgc
tgctcaagaggattcttcaacttccaggaaggaggctgcacaccgtgtctctgcagccat
gtgggcaacaactgcgacgccaacacaggacagtgcatctgtcctccaaacacacttggt
gagaggtgcgaccgctgtgcccccaaccactggggccacgatatcacgactggatgcaag
gaatgtggctgtaatttggtgggctcggtgcgacaggagtgtaacgtcaacaccggctgc
tgcgtctgccacgactcatttcgaggagagaaatgcgatgaatgtcagctgggataccga
gactttccccagtgcaccacatgcgaatgtaacatctcaggatcagaactcgagacttgt
gacctagaacgaggagtttgtgcctgcgcagatcgaactgggaagtgcagctgcaaggaa
aatgtgatgggagacaactgtgaccgttgcaagccgaacacattcggattgtcactgcaa
aatccgcttggctgcagcaaatgttactgttacgggctgacacactcctgcactgagtca
cagggactcatcaggatgaggttaacattgaaaccagaacagacagtacttcccctggtg
gataaaaacagcattgttgagacaagaacaggagtgagcttcaaacacccagagatcctc
gcacatgctgatctggtcaccacagttctttctgagccctactactggaaactaccacaa
cagttccgaggctccatgatcacagcatacggtgggaagttgatgtatgcagtgtactat
gaggctagagatgaaattggaccctcctcatacgagccccaggttatcattaagggcggc
gctaaccacaacatcgtgatgacacgccacgtagtgggactccagattggtcagctcaca
cggcacgagatagacatgacagagcatgagtggaggcatgcagatggccgggcaatgaca
cggcaggacttcatggatgttttattctatgtggactacatcctcatcaaggcttcacat
ggcagccagatgcgaaacagccatatttcagagataagtctcactgtggcagaagaaggt
acacccacgggggagagtgtgaaagcctaccaaatagaaaaatgcgaatgtccaattgga
tactccgggctatcctgcgaggaatgcggagcaggtttctaccgccttcgcagcggctcg
cacacatctgctccggcctccagagtcccaactgctgcgggcatgggcagttgtgttcag
tgccagtgcagcggccactcgaccacctgtgaccctgacacatccatatgccagaactgt
caagacaacacagagggggatcactgtgagcgatgtgttccgggattctacggtctggtc
cgaggattccatgatgattgcagaccttgcgcctgcccccttacgacacctgggaacaat
tttagtccaacgtgcgtcaccgaagggtatgatgactaccgttgtacgtcttgtcctgag
ggatacgagggaaaatactgtgaaagatgttccactggttactatggtaaccctcagata
cctggcggtcgatgcgaggagtcgtgtgacgacgagtgctcaggtttgctgctcaatgac
atggaccgcctgtatcgcatcgtcactgaaatcacgctgaccacacccctgccgccaccg
tacaagatcctgtaccgctttgagaacatgactgaagaactcaagcacatgctgtcgcct
cagaaagctccggagagattactgcagctggccgactccaacttgggatcgctggttgtt
gagatggaccagctacacagcagggctacgaaagtatctgccgacggagaacaagtggaa
gatgacgccgacagaattcagacgcgagctgaggtcctggagaagttcatcagggacacg
ctgctgggagctcaagaccttcagtccaaagcggacgagttgaaccgcatgctggcgcgc
aaagacggggcgccggaaaaaggtttgaaggagacgaaggaggagattcaaaccatgctg
gccgagatgagaaaacgacagctgggagacaggcagatcattgccgaggaggagatggat
ctggcagaggagctgttccagaaagtgaagaggatgtttggtggtcctcatcaggccaca
gaagacctaaaagcagagataaaaggcaagctgtcagaccatcagagcaaacttcaggag
gcccaggatctgctttactctgctcgtgagaagacgagattggctggcacgttggctggg
caaaaccaagccaacctcacattcttggagaggaagcatgctgccgtccttggggtgaaa
caagaagcacaaaaggtcctgggggaaggagaaacccttttggatgacgccaaccagctt
tcagacgtcatcaataaagagttagaggatgcgcaggagatgagcaaagaccttggtcct
cttaacgagcagctgcacgacaaagtccgggacctcaccgacggtttgagtgggggcggg
ctcgctcatcgcgtgcacgccgctgaggatcacgcccaacaactgaatgaatccgctgca
attttggacggaatcttggccgaagcgaagaatctctccttcaacgcgacagccgccttc
aaagcatatacaaacattaaagccaatgttgacgaagcagagaaagaggcgaagatggcc
aagcagagggtgtcagaagcgctgacaatggctttaggcccagatatcccaatgaaggag
gaagctcaaagtgcccttcagaagagtctcaagctgctcaaccaggctaagcaactccat
aatgatgtcaaagacaatgccgcgactgtctctggactaaagggcagagttaaagcatca
agagaccgaaccaaagacctgctcaaagctatcaatggaaccatgacaacactcagcact
attcccaatgacacagcggccaagctggcggctacaaaagctgtggccgccgaggcaaac
gctacagccatcgacgtcctggagcgcctcgcggtcttgaaccttcaggtcagcggcata
cagaagaacttcagccagttggccgacacggtcaacaccgctaacaaaatgatccaagac
ccggagaaaaacatccacgcggccggagctaaagtgaaggatttagaggacgaagctgat
cggctgatggagaagctaaagccgatcaaaaagctggaggacaacttgaggcgaaacatc
tcacagatcaaggaactgatcaaccaagccaggaaacaagctaactccatcaaagtgtcg
gtttcgtcaggtggtgactgtttgcgaagttaccgccctgacatcaggaagggcaggtac
aacaccatcattcttcacgtcaaaaccacaacgcctgataatctgctcttctacctcggc
tctgccaaatatgttgatttcttggctctggagatgcgtaaaggaaaagtgtatttcctt
tgggacgtgggttcaggtgtgggacgggtggaatatccccatgtcaccatcaatgacggg
aactggcacagaatcgaagcttctcgtaacggattaaatggtaccatattagtgtaccct
ctagaaggtcccagggccggtgcggtgccaaccccaagcagcgcaaactcacccgtaacc
tacaccatcctggacgtggaccagaacgcttacctttttgtggggggaatactgggcacg
attaagaaagcagatgctgtgaggacaacgacgttcactggctgcatgggggaaactttc
ctggacggtaaaccggttggactttggaactacagggacaggcagggagactgtaaagga
tgcgttgtcagcccccagtcatcaaatggtgaagggactgtccagctggacggggaaggc
tacgccgcagtgggacgtcccacaagatggaacccgaatgtttccagtgttacattcaaa
ttccgaacatttgcctctgacgcactgcttatgtatctggcaactgatgatatgaaggac
tttatgtccttggagctcgcagggggcaaggtgaagatgaactttgatctggggtcagga
gtcgggagcgccatatcacctaaccgtcaaaacgatggccgctggaagtccctcactatg
tctcgaaacaagaagcacgccacagttaccatcgtggacattgatagcagcgctgaggag
aagatcgcggccacatctctgggtgcggccaccgggctgaacctcaaggagaagcagagc
atttattttggaggcctgcccaccgttggaaactataggccagaggtcatgctgaagcgc
tatgtaggctgccttcgggagattgaagtatcgcgaactccatataatctcctcagtagc
tctgattacaccggggttacgaaaggatgtaacgtagagaacctgtacatggtcagcttc
tccaagccaggatacgtggagctcggcgggctgtccctggcggtcggcactgagctcagc
ttgtcgttcagcaccctggtggacaccggcaccctgctgttagccgtgggtggagctccg
cccctcagccaacaggtccgcaacaaaaatgccatctccaagaggaaacgcagacaatca
ggagagcccttcctctcagtgatgctgaacaaaggctccttggaggtgttggtgtacacg
ggcagccacagtctgcgtcgtgtcatcagacggcccgagcaaggcatcctgagtgacggt
agagagcactcgctgcgcatcgagagattacctggcagatcttttgcagttcaagtggat
gaagaggccaaaagagaggctccgcttcccaacgaccagccaatcagcttgcaccgcgtc
ttcctcggtggtattcctgccgagttggagcagacgtccaatagggccaacattccattc
caaggatgtatatggaatctaatggtcaactccgttgtgtccgacttctcccaggcggtg
tccttcgacagcgctgaaatcggccagtgtcccaaccttgccccgctgcctcctctccct
tatccgacggaagaggcgcagaaggaaaaagatgcggccaaacctgacctggctgcaccg
acccctgtgcctgtcacgtggccacctgtacttcccgctgagcccacggcccttgtctta
cctgctgccccacccactgctacgcttacttctgctgaagccccgcccactgctgatacg
gacgcgtgcccctcggctgtggcccccgtggcccttgagaaggcctaccagttcgggctg
agcaggaacagtcacatgagcttcgccttcgatgacgccaaagttagagaaaggttgatt
ttggagtttgagctgagaacccaggaggagtcaggactggtcctctacatggccagaatc
aaccacgctgacttcgtctccatccagatcaaggacggacaggtgtgcctgggttacgac
ctcggccacggcaacacatctggatgcgtccccttctccatcaatgatggcagctggcat
aagatccgtgtggttcgcagcaagcagcgggctctcctggtggtggacgggcgatacagt
aaacagatgatcagccccaaaaaggcagacctgctggatgtggtgggcgcgctgtatgtc
ggcggtctcccgcacaactacaccaccaagcggatcggaccgattctttacagcatcaac
ggctgcatgcggcacctgaagatggtcggtggtccggtcagcacaaaggctgcggctaca
ggtcgtaccgagacacacaccgaggacttcgagctcgacatggcgacgccaacgtcgggt
cacatggtcggaagatgcttccctgccactgaggcgggaacttatttcgacggaaccggc
ttcttaaaagcagtgtccaactacagagtgggtctggacgtgtccattgcattggagttc
cgaaccagcagaactaacggcgtccttttggccatcagtaaccaaggcaacgatggactt
ggtattgagattgttcagggccagctgctcttccacgttgacaacggcgccggtcgcatc
acggcgatgcacgcgcccgacggcgacggcttctgcgacggtcggtggcacgcggtcgtc
gccgtcaaggctcgccacagggtggagctgctggtggatggcaagatgagccaggcccag
agtcccaacgcgcggtccaacacctgcgacaccaacgaccccatctacgtgggcgggtac
ccggacggcgttcgtcaggcagctctgaccggccgcacgtccttcagaggttgcatgagg
aacctgaagatcaccaaagcctcaaaggtcatggaggtgcacttcgacaaggctctggaa
gtcgcaggagtgcaaccgctgtcgtgtcccgccggcgccgcgtaa
DBGET
integrated database retrieval system
