Syngnathoides biaculeatus (alligator pipefish): 133496539
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Entry
133496539 CDS
T09681
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133496539 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133496539 (lrfn5b)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
Ig_2
LRR_9
fn3
Sp38
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
133496539
NCBI-ProteinID:
XP_061668226
LinkDB
All DBs
Position
23:9552485..9561104
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AA seq
805 aa
AA seq
DB search
MTMETLLLYLMVLGAAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVE
MRLGDNFVTSVKRKDFANMTKLVDLTLSRNTIGTIVPHAFKDLENLRALHLDSNRLTRIT
NDTFSGMSKLHHLILNNNQLTHIQIGAFNDLTALEELDLSYNNLESVPWVAIQRMSSLHT
LNLDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLATSGIMGPTSFAL
SFGGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQE
LRALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRASVHADGTLDILISTVKDSGSF
TCVASNPAGEAQQKVDLLIAKLPHVINNTAADREPDPGSSDIATVTKTGAEGPGGGVPLG
NPKTGQEKKVVIAEATSTSAMVHFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSESI
LVNNLAAGTQYDLCVLAIYDDQVTSLTATRVIGCVQFTTEPQYLRCHFMQSQFLGGTIVV
IIGGIIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGQLQGCGLPKSLSKQI
LRPEKNDKECLRVALPPPEPSKQRAPVVIAAPNAAAAAKPSLPDCTVSTSAASHSWHPAS
PGAPRVKRAGAPSKTSDIRRAEAKADVQLNNVNRNNSSEAKMAPVVSRAQPTKWTQGPRV
PRAQQVPRQYMTVPAGGVRVNRRHSLNADSSRERLYVAYPKTGASLRSKRSLSMSGELPQ
LQNAANVHRARAKLCRSEWLLESTL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggagacccttctgctctatctgatggtcctgggtgcagctgtcaaggcccac
aaggttcaagtctgtcccaagcgttgcgtgtgccagatgctcaaccccaatttggccaca
ctctgcgacaaaaaggggctcctgttcgtgccccccaacatcgaccgccacacggtggaa
atgcgcctgggggataacttcgtcaccagcgtcaagcgcaaggacttcgccaacatgacc
aaactggtggacctgacgctttctcgcaacaccatcgggacaatcgtgccgcacgctttt
aaggacctggagaacctgcgggcgctccacctggacagcaaccggctgacgcgcatcacc
aacgacactttcagcggtatgtccaagctgcaccacctcatcctcaacaacaaccagctc
acccacatccagatcggcgccttcaacgacctgacggcgctggaggagctcgacctctcc
tacaacaacctggaaagcgttccctgggtggccatccagagaatgtccagcctccacacg
ctcaacctggaccacaacatgctcagctacatccccgaggggaccttctcgggcctgcag
aagctcaagaggctggacgtgacctccaacaagctgcagaagctacccccggacccgata
ttccagagagcgggggtcctggccacctcggggatcatggggcccacatcgttcgcgctg
agcttcggcgggaacccgctgcggtgcaactgcgagctgctctggctgcgccggttgcga
cgcgaggacgacctggagacgtgcgcttcgcctcaacacctcgccggacgctatttctgg
accgtgtcggaggaggagttcctgtgcgagcctccgctcatcacaaggcactctcaggag
ctgcgggccctggagggtcagagcgtgacgctacggtgtaaagctcggggggatccggac
cccatcatccactggatcgcccccgacggacgcctcatgtctaactcgtcgagggcctcc
gtgcacgccgacggcactctggacatcctcatcagtacagtcaaggactcaggttccttt
acttgcgtggcgtccaacccggccggcgaagcccagcagaaggtggacctgctcatcgcg
aagctgccgcacgtcatcaacaacacggccgccgaccgggaacccgacccggggtcttcg
gacatcgccacggtgaccaagacgggggcggagggtccgggcggcggggtgcccctgggg
aaccccaagaccggccaggagaagaaagtggtcatagccgaggccacgtccacctcggcc
atggtccacttcaacttccagaggaacattccgggcatccgcatgtttcagatccagtac
aacgggacctacgatgactcgctggtgtacagaatgatcccgccgaccagcgagagcatc
ctggtcaacaacctggcggcggggacgcagtacgacctctgcgtgctggccatatacgac
gaccaggtcacctcgctgaccgccacgcgggtcatcggctgcgttcagttcaccaccgag
ccgcagtacctgaggtgccacttcatgcagtcccagttcctgggcgggaccatcgtggtc
atcatcggggggattatcgtggcctcggtgctggcgtttatcatctttctcatcgtgcgg
taccgagtctgcaaccagggagacgcagacaaggctctggagatgggcgacattcgttcc
ctgagcagcgacggtcaacttcagggctgcggactccccaaatctctgtccaagcagatc
ctgcgtccggagaagaatgacaaggagtgtctgcgagtggctctaccgcccccggagccg
tccaagcagcgagcgcccgtcgtgatcgccgcccccaatgccgccgccgccgccaaaccc
tccctacccgactgcaccgtgtccacctcggccgccagccacagctggcacccggcttcc
cccggcgccccgagggtaaagcgtgccggcgccccgtcaaaaacctcagacatccggcgg
gccgaggcgaaagcggacgtccaactcaacaacgtcaaccgcaataactcgtcagaggcc
aagatggcgcccgtggtatcccgcgcccaaccgaccaaatggactcagggtcccagggtc
ccgagggcgcagcaggtccctcgccagtacatgaccgtacccgcggggggcgtcagggtc
aatcgcagacactccctcaacgcggactcgtccagggagcgcttgtacgtggcctacccc
aaaacgggggccagcctgcgttccaagcgcagcttgtccatgagcggcgagctaccgcag
cttcaaaacgccgcaaacgttcatcgggctcgcgccaagctgtgccgctccgagtggctc
ctggagagcaccttatga
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