Syngnathoides biaculeatus (alligator pipefish): 133496604
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Entry
133496604 CDS
T09681
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133496604 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Other domain-containing proteins
Patched domain-containing proteins
133496604 (ptchd4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
133496604
NCBI-ProteinID:
XP_061668382
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All DBs
Position
23:4877856..4917811
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AA seq
904 aa
AA seq
DB search
MLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLELLVAPT
HSLAKIERSLANSLFHIDQSKHKLYSDLHTPGRYGRLILLAKSGGNILEVADQVLQVHKQ
VLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQAVLSNSTFHKVPVSYPNT
TLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNNGPVVQDAIAERWENEFC
ALVNRLSTAETPHGPDQLHIHSLTSFSLWRDFHQTGVLAKGEVLVSLVLVLMAATISSSM
RDCLRGKPFLGLLGVLTICIANVTATGIFFISDGKFNSTLLGIPFFAMGHGTKGVFELLA
GWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIESVKIFCQSMCVA
ILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWFKTMMSDGHDLST
HHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGCLQISDGSNIVNL
LASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKTLSHGFNKISWIDNF
FHYLRVVNVSASTKSDFINILKGSFLRSPEYQHFTEDIIFSKNRDTNEYDIIASRLYLVA
RTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSSSVISPILTSGFSVLTIL
ILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISILCLIYTLNFAMDHCAPH
LYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIIPLVFVPSNLTYTLFKCSLLTA
GCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREEIECIDVRENPDH
VTNV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaagtgatacacagagggctcaaggcttctttctactggttaggcttattc
gttagcagacaccccgttttcttcctcaccgtgcccgcggttctcaccatcatttttgga
tctacggtgctaagccgattcaaaccggagacggacctcgagttgctggtggcgccgacg
cacagcctggcaaagattgaacgaagtctggccaacagcctgtttcatatcgaccagtcc
aagcacaaactgtattcggatttgcacacaccgggcagatacggcaggctgatcctgctg
gccaagtccgggggaaacatcctggaagtggctgaccaggtgctgcaagttcacaagcag
gttctggatttgcgggtcaattacaaaggattcaactacacgttcgcgcacctctgcgtg
ttgagccacagagacaagcgctgcctcctggatgatatcatcaccatcttcgaagacatc
agacaggctgtgctttccaacagcactttccacaaggtgcccgtcagctaccccaacacg
acgttaaaggatggtcgagtgtccttcatcggtcatcagctaggaggcgtgtccttctca
cccaacagccgggaccaacaggttaagtttgcccgtgctgtgcagatcacgtactacctc
cgcaacaatggacctgtggtgcaggatgccattgcagagcgctgggagaatgagttctgt
gccctggtcaatcgactatctactgctgaaacacctcatggaccagaccaactccacatc
cactccctcacatcctttagcttgtggcgagacttccatcagacaggcgtgctagccaaa
ggggaggtgttggttagccttgtcctggtgcttatggctgcaaccatatccagctccatg
cgggactgtttgagggggaaacccttcctgggcctccttggggtgttgaccatctgcatt
gccaacgtgacagctacagggatctttttcatatcagatgggaaattcaattccacactc
ctggggattccattctttgcaatgggtcatggaaccaagggggtgtttgagctgctggca
ggctggaggagaacaagggaaaacctgccttttaaggagcgtgtcgccgatgcatttgct
gatgtgatggtgtgctacacgatgaccagctcgctctacattatcacctttggcatggga
gcaagccctttcactaatattgagtcagtgaagattttctgccagagcatgtgtgtcgcc
atcctggtcaactacttctacgttttctcattctacggctcctgcttggtgttcgctggg
caactggagcagaaccgctaccacagtgtattctgctgtaaaatcccttcagtggagtat
ttggaccgccagcccacttggtttaaaacgatgatgagtgatggccatgacctctcaaca
caccatgacagtgtcccataccagaaccatttcattcagcacttccttcgtgaacactac
acagagtggattaccaacacctatgtcaagccctttgtggttattctctatctcatctat
gcttctttctcattcatgggatgtttacaaatcagtgacggttcaaacattgtaaacctt
ttggcgagtaactctccaagtgtttcatatgcactgactcagcagaaatacttcagcaac
tacagtcctgtgattgggttctacatttatgagcccattgaatactggaactcgacagtg
caggagcatttgaagacacttagtcatggcttcaacaagatctcttggattgataacttt
ttccactacctacgggtggtgaatgtgagcgcatcaaccaagagtgactttatcaatatc
ctcaaaggctcattcctgcggagccctgagtaccagcacttcacagaggacatcatattt
tccaagaaccgtgataccaatgagtatgatataattgcctcacgcctgtatttggtggca
cggacaacagaaaagaagcgtgaggaggtggtggaacttctagagaagcttcgcccacta
atgctgataaacagtattaaattcattgccttcaatcccacatttgtgttcatggaccgt
tacagttcctctgtcatttctccaatcctgacctcaggctttagtgtactcaccatcctt
attcttactttcttccttgtcattaaccccttggggaacttctggctcatcctcacagtt
acgtcagtggagcttggcgtcttaggtttgatgactctttggaatgttggtatggacagc
atctcaatcctgtgccttatttataccctaaacttcgccatggatcactgtgcaccacac
ctatatacctttgtgctggccaccgagcacacgaggacgcagtgcatcaaattggcactg
gaggagcatggtgcggccatcctgcagaacacatcttgctttgtgattgggatcatacct
ttagtgtttgtgccttccaatctgacctacacactgttcaagtgctcactcctcacagcc
ggctgcaccttgcttcactgcttcgtcatcctgcctgtcttcctcaccttcttcccacca
tctaaaaagagacacaagaaaaagaaacgggctaagcggaaagaaagggagcgggaaaga
gagagggaaagagagagggaggagatcgagtgcatagatgtgagagagaatcctgatcat
gtgacaaatgtctga
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