Syngnathoides biaculeatus (alligator pipefish): 133496748
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Entry
133496748 CDS
T09681
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133496748 (vps50)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Others
EARP complex
133496748 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
133496748
NCBI-ProteinID:
XP_061668710
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All DBs
Position
1:7790263..7869570
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AA seq
995 aa
AA seq
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MQKIKSLMARQGLKSPQESMTDLSPVENLRIPSKFQEELRELREQPIDPQAEQEMIDSIE
EVYFSNDTFDMVQHELEKLPTELNLLELEEYRDRLKRQQAAVSKKVADLILEKQPSYVKE
LERVTALQANLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIK
TLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLD
VALSKTCKHFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAG
NADTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMVSYHRTMQWHEAHDKQATTPTP
EDAVAAESDELVVDHSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDV
ISRLMQVGEEFCRSKSELLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNF
NISQLHEFKFMDQCRSPSLSPSRHGPSSPIQIKEELSLFQQYLQEGNPFEMHFEQKDEET
EDVLASNGYESDELEKSAYQDYDSDSDVPEELKQDYVDEQTGDVPLKSVSRESIKGKKRS
DYNLNKSNAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLYAVYAFFG
RNDTPVPSPSLLSHGGRESGSARVMGPACLYESSGLGLISSRLRTTLNRIQESLIDMEVG
SENPGMHGPTEDRKEKVPSPHLSQMVVLTNSGSLYGLAQRVVATESLVFLAEQFESLQSH
LDTMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMSGVKWDIKEIM
SQHNIYVDVLLKEFEMFSQRLADISRHVPLPLPVSNVLWEHCIRLANRTLVEGYANVKKC
SNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVEIYIKAYYLTENDMEQFIKNHREYSM
KQLANLVNVCLGTHINKKARQKLLAAIDDIDRPKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccggcagggtttaaaaagcccccaggagagcatg
acagacctcagtcctgtggagaacctgaggatcccaagcaagtttcaggaggagttgcgg
gagctcagggaacagcccattgaccctcaggccgagcaggagatgatcgacagtatcgag
gaggtctacttctcgaacgacacttttgacatggtgcagcacgaactggagaaactccca
actgagttgaacctgctggagttggaagagtaccgagacagactgaagagacaacaggct
gctgtttcaaaaaaggttgctgatctcattctggagaaacagccgtcttacgtcaaggaa
ctggaaagagtgacggcgttacaggccaacctgcagctggctgctgtcatttgcacaaat
gcaagaaggcaactgagtgtgtcaaaggagggattcacagaagcaagtttgggtttatta
gccaatcagagaaggcggcaactcctaacaggactgctcaagtctcttcggaccatcaag
accctgcaaagaacagatgtacggctcagtgaaatgcttgaggaggaagactatcctggt
gctatccagctctgtctggaatgtcagaaagctgccagcacattcaaacactacagctgc
atcagtgaattgaattcaaaactgcaagacactctggagcaaatagaggagcagcttgac
gtagccctgtcaaagacttgcaaacactttgatgttgcacactataccaaagtccagctg
gcctacacgctgcttgggaagacacagactgctatggaccagttgcacatgcacttcacc
caggccatccacaacactgtgttccaagtggtgctgggatatgtcgagctctgtgctggc
aatgctgataccaagttccagaaaatgcaatataaggatctctgtacgcatatcaccctg
gatagctacattccgtgtctgactgatctatgcaaggcattgtgggaggtgatggtgagt
taccaccgcacgatgcagtggcacgaagcgcatgataagcaagcgactacacccactcca
gaggatgccgtcgcggcagagtctgacgagttggtggtggaccacagctacgttaagaag
aagctggaacatgggctgacacggatctggcaggatgtccagttaaaggtgaaggcctat
atccttgggaccgacatgtctaacttcaaatatgatgacttcatcgtcgtattagatgtc
ataagcagattgatgcaggtgggtgaagaattctgtcgaagtaagtcggagctcctgcaa
gaatccattaaacgccagagtgtcaactactttaaaaactatcacagggcacggctggag
gagctgcgcatgtttcttgagaatgaaacatgggaactatgccctgtcaagtctaacttc
aacatatcacagctccatgagtttaagttcatggaccagtgtcgctccccttcgctttcc
ccgagcagacacggtccatcttctcccattcaaatcaaagaggagctgtctctgttccag
cagtacctgcaagagggaaacccctttgagatgcactttgaacagaaagatgaagagaca
gaggatgtgctggcatctaacgggtatgagtctgacgagctggagaagagcgcgtatcag
gattacgacagcgatagtgacgtccccgaggagctcaagcaggactacgttgatgagcag
acgggagatgtccccctcaagagtgtatctcgggagagtataaaaggcaagaagaggtca
gattacaacctgaataagagcaacgccccaatccttactaacacaactctcaacgtcatc
cggctcgtcgggaaatacatgcagatgatgagcattctgaagccgattgctttcgatgtc
atccactgtgtgtcccagctctttgactactacctctatgctgtttacgccttctttgga
cgaaatgacacgcctgtcccaagcccatctttgctaagtcatggtggcagagagtcgggc
tcggcccgagtgatgggccctgcttgtttgtatgaatcatcgggtctgggccttatcagc
agcagactgagaaccacactgaaccggatccaggagagcctcattgacatggaggtaggc
agtgaaaatcctggtatgcacggtcccacggaggacagaaaggagaaggtgccgagccca
cacctcagtcaaatggtggtcctcaccaacagtggtagtctgtatgggctggcacagaga
gtggttgccactgagtcccttgtgtttttggctgagcagtttgagtcacttcagtcccat
ttggacacaatgatgcctgctgccaagaagccttttctgcagcagttctattcccagaca
gtgtcaacagcaagtgaactgcggaagcccatatactggatcgtggcagccaaggccatc
gactacgagcagatgttgctcctgatgtccggcgttaaatgggacattaaagagatcatg
tcccagcataacatatatgtggatgtcctcttaaaggagtttgagatgttcagccagcgg
cttgccgacatctcgcgacatgtgcctctcccactgcccgtgtccaacgtcctctgggag
cactgcatccgcttggcgaacagaactcttgtagagggctatgctaacgtgaagaaatgt
agcaacgaggggcgggccctgatgcagctggatttccagcagtttttgatgaaattggag
aagctgactgacctgaggcccattcctgataaggagtttgttgagatctacatcaaagcc
tactacctgacagagaacgatatggagcaattcatcaagaaccacagggagtactccatg
aagcagctggcaaacctggtgaacgtttgtttgggcactcacataaacaagaaggcccgg
cagaaacttctggccgccattgatgacatagacagacccaagagatag
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