Syngnathoides biaculeatus (alligator pipefish): 133496779
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Entry
133496779 CDS
T09681
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04140
Autophagy - animal
sbia04142
Lysosome biogenesis
sbia04145
Phagocytosis
sbia04148
Efferocytosis
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133496779 (vps18)
04142 Lysosome biogenesis
133496779 (vps18)
04140 Autophagy - animal
133496779 (vps18)
04148 Efferocytosis
133496779 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133496779 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133496779 (vps18)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133496779 (vps18)
Hops complex
133496779 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-RING_5
zf_RING_Vps8
zf-RING_16
zf-C3HC4_2
aq_1631
zf-RING_UBOX
zf-ANAPC11
DUF1664
zf-RING_2
LETM1_C
RBSN_mid
zf-rbx1
STX17_N
KNOX2
DUF5600
Apolipoprotein
DUF4446
zf-RING_11
CLIP1
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
133496779
NCBI-ProteinID:
XP_061668743
LinkDB
All DBs
Position
23:10772940..10780756
Genome browser
AA seq
985 aa
AA seq
DB search
MASILDEYEDSQKSRQSASQHSRLASANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIEIGRKDDSKVYKLFLDPTGSHLLISM
STSECLYLNRNTQKVRSLSRWRGHLVESVGWNKLLCNETSTGPVLVGTSQGVIFEAEISA
AEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGRVA
EGTEQQGFSSIFTQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVFYGQ
LDYVRPDSLLSDVQVWEYTPDIDLSFNKPISIVLTQFHFLLLLHDRVKTICTLNGQVVYE
DVFPDKFGPLKRMIKDPSGGLVWIYTERAVFRYHIQRESRDVWQMYMSMNKFDLAKEYCR
ERPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQDEALKEFLLKK
LSNLKPSERTQITLLVTWLSELYLNRLGKLVDDDDDDSKESARFRETRDEFRNFLNTSKH
RECLYNNRSTIYDLLASHGNVDDMVYFSVVMQDYERVVSHYCQHDDYCAALDVLSKHCDE
KLFYKFSPVLMQHIPERVVDAWIQMGKRLDPKKLIPALMNYSHMGSSQQINETVRYMEFC
VHELRVTEEAIHNYLLSLYAKYKPDSLLLYLEEAGTYASEIHYDLKYALRLCAEHGYLRA
CVLVYRIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKK
AMNCLSSCDLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKR
IREDIQEMRNKYGVVDSQDKCSACDFPLLNRPFYLFLCGHMFHSDCLLQEVTPHLSAYKQ
SRLDELQKKLSASTQASKSRHRPAPNEEGDAASLGKGAASREQMKSDLDDIVASECVYCG
ELMIRSVDKPFIDPLKFEEDKSSWL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatactggacgagtacgaggactcgcaaaagagcaggcagagcgcgtcgcaa
cacagccgcctggcgagcgccaacatcggcataacccactcaggcttcgtcaatgtgcgc
ctcgaggaggaaaagccaattttcaataagcagaggatcgatttcacgccccccgagagg
atcaatcacctggctgtctgcaacaatcagctatgcatgagtctggggaaggacaccctg
ctgagaattgatttggctaaacctgatcagcccaatcaaattgagataggaaggaaagat
gacagcaaagtgtacaaactcttcctggatcccacaggctctcacttgctcatcagcatg
agcaccagcgagtgtttgtacctgaacaggaacacgcagaaggtgcgcagtctgtctcgc
tggcggggccacctggtggagagcgtgggctggaacaagctgctgtgcaacgagaccagc
acggggcccgtcctggtcggcaccagccaaggcgtcatcttcgaggccgagatctccgcc
gccgaggggagcctcttcaacaccaacccggaccagtacttcagacaagtccactccctg
gaggaagacggaaagccagcgccggtgtgctgcctggaggtggagcgcggcctggagaac
aagtacttcatcatcgccaccacccgcaagcgactcttccagtttgtgggcagggtggcc
gagggcacggagcagcagggcttcagctccatcttcacgcagaaccaggacctgctgccc
agcttccaggagttcccggccaacatgggctacagcgagatcaccttctacacgtccaag
ctccgtacctctcccaaggctttcgcctggatgatgggcaacggggtgttctacgggcag
ctggactacgtcaggcccgactccctgctgagcgacgtgcaggtgtgggagtacacgccc
gacatcgacctgtcgttcaacaagcccatctccatcgtgctgacccagttccacttcctt
ctgttgctgcacgaccgggtcaagaccatctgcacgctgaacggccaggtagtttacgag
gacgtctttccggacaagttcggccccctcaagaggatgatcaaggacccgtcgggtggc
ctggtgtggatctacacggagcgggccgtgttccgctaccacatccagcgggagtcgcgc
gacgtgtggcagatgtacatgagcatgaacaagttcgacctggccaaggagtactgccgc
gagcgtcccgagtgcatggacatggtcctggccaaggaggccgagcactgcttccagaac
aagcgctacctggagagcgccaagtgctacgccctgactcagaactacttcgaggagatc
gctctcaaattcatcgaggccaagcaagacgaggccctgaaggagttcttgctgaagaag
ctgtccaacctgaagccgagcgagaggacgcaaatcaccttgctcgtcacctggctgtcc
gagctgtacttgaaccgactgggcaagctggtggacgacgacgacgacgacagcaaggag
agcgcgcgcttccgggagacccgcgacgagttccgcaacttcctgaacacctccaagcac
cgcgagtgcctgtacaacaaccgcagcaccatctacgaccttctggccagccacggcaac
gtggacgacatggtgtacttctccgtggtcatgcaggactacgagagggtggtgtcgcac
tactgccagcacgacgactactgcgccgccctggacgtgctctccaagcactgcgacgag
aagctcttctacaagttctccccagtgctcatgcagcacatccccgagagggtggtggac
gcctggatccaaatgggcaagcggctggaccccaagaagctcatcccggcgctgatgaac
tacagccacatgggaagcagccagcagatcaacgagacggtgcggtacatggagttctgc
gtgcacgagctgcgcgtcaccgaggaggccatccacaactacctgctgtcgctctatgcc
aagtacaagcccgactcgctgctgctctacctggaggaggcgggcacgtatgcctcggag
atccactacgacctgaagtatgcgctcaggctgtgcgccgagcacggctacctgcgcgct
tgtgtgctcgtgtacaggattatggagttgtacgaggaggcggtggatctcgccttacaa
gtggatgtggatttggccaagagttgcgcggacctgcccgaggatgacgaggagctgcgg
aagaagttgtggctgaagatcgcccgccacgtggtgcaggaggagaaggacgtgaagaag
gccatgaattgcctgtccagctgcgacctgctcaagatcgaggacatcctgcctttcttt
cccgactttgtcaccattgaccactttaaggaggccatctgcagctccctggaggaatac
aacaagcacatcgaggagctgaagcaggaaatggaagaggccaccgagagcgccaaacgc
atccgagaggatatccaggaaatgcggaacaagtacggtgtggttgactcgcaggacaag
tgttccgcctgtgactttccgctgctcaacaggcccttttatttgttcctgtgtggacac
atgttccactctgactgcctcttgcaggaagtgacgccgcacctgtcggcgtacaagcag
agccgcctggacgagctgcagaagaagctttcggcctccacgcaggcgtccaagtcgcga
caccggcccgcgcccaacgaggagggcgacgcggccagcctcggcaagggcgccgccagt
cgcgagcagatgaaatctgacctggacgacatagtcgcgtcagagtgcgtttactgcggc
gagctgatgatcaggtctgtggacaagccgttcatcgatccgctgaagtttgaagaggat
aaatccagctggttgtga
DBGET
integrated database retrieval system
