Syngnathoides biaculeatus (alligator pipefish): 133496839
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Entry
133496839 CDS
T09681
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133496839 (gtf3c2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
133496839 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WHD_eIF2D
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
133496839
NCBI-ProteinID:
XP_061668856
LinkDB
All DBs
Position
23:complement(7093947..7106526)
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AA seq
971 aa
AA seq
DB search
MVKETAAEDVDDPERGREAAPKPSFDLTPSSKGRQRKINSRYFDYDTGDANEDPGDDDVP
ARKVVAPTSGKTTGKRGRPRKVPLASTDTSHQTPDALNGDTSSQTNAGVTDCDTSDANEQ
PKDAAAREPATKAAAAATPVKTPGKRGRPRKVPLASGDDFKTPQALNGDISPQTNASPSP
CTENGTPKPKRKYVKKQFFHMEPVTPREKSPEESQELQQGGRPRRSAAKMAMKFLHAMAQ
EEVSRPSEGPEAAGGVIAKPAAETTAESSSQAKKGRRGRKRKSSDGDAAEDEDFVPNVGT
SETEEEEEGEEEEEEEEEGEDDQEVADSDSHDESSVPRNARLTNLPLVEIVNNHKTFRDE
QLCGWVFPEWLPSAGVWHRVPPSELETYLPQECLSAAFKVSRDGCGEERPLQRLNRFESL
PAHPERWDMQLYTGGPVWAMEWCPTPDNAVASQYLALACRRDMQEEHYFHKTYSGPGLVQ
LWDVGTLDYDTTPSSKPALAYGLALDRGFICHLKWCPSGGWESPATQKEAPLLPRLGLLA
VATSAGAVTIYSLPHPDALRASQDHQDSAGTDQPTVIYKPNPVVTLKPGSLKALRLERSG
QVLSMDWLPIKPHDVIAVGFYDGMVGLWDLNTKSALLRLQESHDYPSLLPYKCFLAHGQG
VRALAFCASSRHLVATAGEDRFVKTWDLRRLYGPITVQKRSLINEICWPTNAPGLLFSQD
SAFAACGTNGVHYFDHQMKSYFAVPRTTTIWSISYSDWLNALATSDVIGEVILSALPSLS
ANTQHIKKTIKKRFPVYFTSMERHAAAEVKEQEQEVCQEELKEKNDGEDGGGGGSGEKAD
VHPPAFDTYKETERKYYLHHSDNNMELFIKRGRMWKKMRDTEFRTRLNMDEMALASVHKV
RLSPNLSSHTWMASGGQAGLVRLNCVKGLNKTDVQDVVSRARVAATEVPANPAVQVPPQD
APQETPCDAPL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaaacggcagcggaagacgtcgatgaccctgagcgaggccgagaggcggcg
cccaagccctccttcgatttaacgcccagctcaaaaggtcggcaacgcaaaataaactca
agatatttcgactatgacaccggcgacgcgaacgaggacccgggggatgacgacgtgccg
gcgaggaaagtcgtggcgccgacttccgggaagacgactgggaagcgaggacgtccgaga
aaggtgccgctggccagcacggacacctcgcaccaaacacctgacgcgcttaacggggac
acctcgtcccaaacgaacgccggtgtcacggactgtgacaccagcgacgcaaacgagcaa
ccgaaggacgcggcggcgagggagcccgcgacaaaggcggcggctgcggccactcccgtg
aagactcccggcaagcgaggacgtccgagaaaggtcccgctggcgagcggggatgacttt
aaaacacctcaagccctcaacggggacatctcaccccaaacgaacgcttccccctctccc
tgcacggagaacgggacccccaagccgaagaggaagtacgtgaaaaaacagttctttcat
atggagcctgtcacaccgcgtgagaaaagtccagaagaatctcaggagttgcaacaggga
ggccgcccaaggaggagcgccgctaaaatggcgatgaagttcctccacgcgatggcgcaa
gaggaagtcagccgtccctctgaaggtccggaagccgccggtggcgtcatcgccaaaccg
gcggcggaaaccacggcggaaagcagttcccaagcgaaaaaaggccgcagaggccgaaag
agaaaaagctccgatggcgacgccgcagaggacgaggacttcgttcccaatgtgggaaca
tccgagacggaggaggaggaggagggggaagaagaggaggaggaggaggaggagggggaa
gatgatcaggaggtggccgactcagattcgcacgacgaaagcagtgtccctcgaaatgcc
agactcaccaacctcccacttgtagagatcgtcaacaatcacaagacattccgtgacgag
caactctgcggctgggtgttcccggagtggctgccctccgccggcgtctggcatcgagtg
cccccgagtgagcttgagacctatctacctcaggaatgtctctcggctgctttcaaagtg
tccagggacggttgtggcgaggagcggcctctccagagactcaacaggttcgagtcccta
cctgcccatccggagcgctgggacatgcagctgtacaccggcgggccggtgtgggcgatg
gagtggtgcccgacccctgacaacgcggtggcctcgcagtacctggccttggcctgccga
agggacatgcaggaggagcactacttccacaaaacctactctggaccaggactggttcaa
ctctgggacgtgggcacattggactacgacaccaccccgagctcgaagcctgccctggcg
tacggcctggccctggaccgaggtttcatctgccacctcaagtggtgtccgtcgggagga
tgggagtcgcccgccacccagaaagaggctcctttgctgcccagactcggcctcctggcc
gtcgccacctccgcgggtgcggtcaccatctacagtctgccccatcctgatgccctgcgt
gccagccaagaccaccaagactccgctggtaccgaccagccaaccgtcatttacaagccc
aatccggtggtcaccctgaagccgggctccttaaaggctcttcgcctggagcgcagcggt
caggtcctgtccatggactggcttcccatcaaaccacacgacgtcatcgccgtcggcttc
tatgacgggatggtcggtctgtgggacctgaacaccaaatcggcgttgttgcgcctccaa
gagtcacatgactatcccagcttgctgccgtacaaatgcttccttgctcacgggcagggc
gtgcgagcgctcgcgttctgtgccagcagcagacatcttgtggcaacggcgggggaggac
cgcttcgtgaagacgtgggatctgcgcaggctctacgggccaatcacagtgcagaaacgc
tccctgatcaatgagatctgctggcccaccaatgcaccaggactccttttttcccaggac
agcgcttttgcagcatgcggtacaaatggagtccattactttgaccaccaaatgaaatca
tactttgccgtgcccaggacgaccaccatatggtccatctcttactccgactggctgaac
gctttggcgacgtcggacgtgatcggcgaggtcatcctctccgcgctgccttccttgtct
gctaacactcagcacatcaaaaagaccatcaagaagagatttcccgtctacttcacgtct
atggagcgtcacgccgccgcagaggtcaaagagcaggaacaggaagtgtgtcaggaggag
ctgaaggagaagaatgacggagaagacggaggaggcggcggcagcggcgagaaggctgac
gtccacccgccagcctttgacacgtacaaagagacagagaggaagtactaccttcaccac
agcgacaacaacatggagttgttcattaaaagggggcgcatgtggaagaaaatgagagac
acggagtttcgcactcggctcaacatggacgagatggctttggcctcagtgcacaaggtg
cgcctgagtccgaacctgagctctcacacgtggatggcgtcggggggtcaggccggcctg
gtgcgcctcaactgcgtcaagggcctgaacaaaacagacgtgcaggacgtcgtcagccgg
gcccgcgtcgccgccaccgaggtccccgcgaaccccgctgtccaggttcccccccaggac
gctccccaggaaaccccctgcgacgctcctctctga
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