Syngnathoides biaculeatus (alligator pipefish): 133497039
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Entry
133497039 CDS
T09681
Symbol
capn3b
Name
(RefSeq) calpain-3b
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133497039 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133497039 (capn3b)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
133497039 (capn3b)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C2: calpain family
133497039 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
133497039
NCBI-ProteinID:
XP_061669201
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Position
23:complement(15238028..15248476)
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AA seq
768 aa
AA seq
DB search
MEVKDHKEPVMEDVHERVLGETEASQAPDDRVDYPSAGANSIYSAILSRNEAVRDAKRLK
TFLELRDKYVKKKVLFEDPLFPACDSSLFYSRHKPPMKFVWKRPSEICENPQFIVDAASR
TDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWTDVVV
DDRIPTYNNRLVFTKSFRENEFWSALLEKAYAKLNGSYEALRGGNTLEAMEDFTGGVTEF
FELSEAPKGIYKIMKKALQRGSLMGCSIDVTSPSEMESRTEHGLVRGHAYSVIALEECDE
VAKDGRIRLIRLRNPWGRVLWKGPWCPNSKKWDTISIADRNNLKKQTVEESEFWMSFDDF
KRNYTKLEICNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYHLQL
YEDDDPEDPQELCTVVVALMQKGRRMQQQFGPRFLTIGFSIYEVPKEMCGQNRHLQKDFF
LYNASKAKCKHYINLREITERFRLPAGEYVIIPTTFEPHHEGPFILRVFSENRSTSEEAE
NTIESDQTRQDKKRKDKPIVFVSDRAFANKEILHDGIQGEKKIQKKKLLQPEEETEEEKQ
FRSIYKEIAGDDMQIFANELQTIMKDVVSKLHEKMTEGFSLETCRSMIALMDTDGTGKLN
LQEFKHLWRKIKQWHLIFKSYDKEHTGSISSFEMRNAVNDAGLHLNKQLYDIIAMRYADQ
HLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGLIKLNVLEWLQLTMYS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaaggatcacaaagagcctgtcatggaagatgtacacgagcgagtgctcgga
gaaacggaagcgtcgcaggcgcccgacgaccgggtcgactacccctcggccggggccaac
tccatttactcggccatcctcagccggaacgaggccgtcagggacgccaagcgtctcaag
accttcctggagctgcgggacaaatacgtgaagaagaaggttctcttcgaggaccctctt
ttcccggcctgcgactcctcccttttctacagccgccacaagccccccatgaagtttgtg
tggaaacgaccctcggaaatatgcgagaaccctcaattcattgtggatgccgccagcaga
acagacatctgtcagggagagttgggcgactgctggctgctcgcagccatcgcctgcctg
accctgaacgagaagctcctctacagagtcattcctccagatcagagcttcacggaaaat
tatgccggaatcttccatttccagttctggcgctacggcgagtggactgacgtggtcgtg
gacgaccggatccccacctacaacaaccggctggtcttcaccaaatctttccgggagaac
gaattctggagcgcgctgctggaaaaagcttatgccaagctgaacggctcttacgaggct
ctgaggggagggaacactctagaagccatggaggacttcacgggaggcgtcacagagttc
ttcgagttgtctgaggcccccaaagggatctacaagatcatgaagaaggccctgcagcga
ggatcgctgatgggctgctccatcgacgttacgtcccccagtgaaatggagtctagaact
gaacacggactggtgcgcgggcacgcctactccgtcattgccttggaggagtgtgacgag
gtggcaaaggacggcagaattcgcctaattcgcttgcgcaacccttggggtcgagtgctg
tggaagggtccctggtgcccaaattcaaagaaatgggacacgatttctattgcggacagg
aacaaccttaaaaagcaaactgttgaggaaagtgagttctggatgtcttttgacgacttc
aagaggaactacacgaagctggagatctgcaacttgacccccgacacgttgcagggcgat
gaaaggcacagctggaccgtgtccgtcaacgagggtcgatgggtccggggcagctctgcg
gggggctgcaggaacttcccagataccttctggacaaacccccagtaccacctgcagctg
tacgaggacgacgaccccgaggacccgcaggagctttgcaccgtggttgtggctctaatg
cagaaaggtcgtcgcatgcagcagcagttcgggccccgcttcctcaccattggcttttcc
atctacgaggtgccaaaggagatgtgtggccagaatcgacacctccagaaggacttcttc
ctgtacaacgcgtccaaggctaaatgcaaacattacataaatctgcgcgaaatcacagag
cgtttcagactgccggcgggcgagtacgtcatcatccccaccacgtttgagcctcatcac
gagggtccgttcattctgagggttttctccgagaacaggagcacctcagaggaagcggag
aacacaatcgagagtgaccaaacgcggcaagacaagaaaaggaaggacaagcccattgta
tttgtgtccgatcgagcgttcgccaacaaagaaatcttgcacgatggcattcagggagag
aagaagatccaaaaaaaaaaactcctccagcccgaggaggaaactgaagaggaaaaacag
ttccgctccatctacaaagaaattgctggcgatgacatgcagatctttgccaacgagctc
cagaccattatgaaggacgtggtctccaaattgcacgaaaagatgacagagggtttcagc
ctggagacatgtcgtagtatgattgccctgatggatacagacgggacaggaaaactaaat
ctccaggagtttaagcacttgtggagaaaaattaagcagtggcatctgatattcaaaagt
tacgacaaagaacacactggctccattagcagttttgaaatgagaaacgccgtgaatgat
gccggtctccaccttaacaagcagttgtacgacatcatcgccatgcgctacgccgaccag
cacctcaacatagattttgacagctacatctgctgttttgtcagactggaaggcatgttc
agggctttcaatgcttttgacaaggatggagatggactaatcaaacttaatgtgctggag
tggctgcagctgaccatgtattcttaa
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