Syngnathoides biaculeatus (alligator pipefish): 133497505
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Entry
133497505 CDS
T09681
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133497505 (cdhr5a)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Cadherin related
133497505 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
HCV_NS4a
Motif
Other DBs
NCBI-GeneID:
133497505
NCBI-ProteinID:
XP_061669386
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All DBs
Position
3:complement(39356586..39388203)
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AA seq
675 aa
AA seq
DB search
MPLSVCTVPAGPVPVPENSTADLQVVKINSGSDVTLTVVVNPEEMFYLKGKTLMVKKELD
YEVLPKRAALVVWVQCSRAGSKSVNESIEVLVENVNDNPPNFAQNNYILEVNELTPVNSS
IGLIEATDADSEPLFYRLESAMDKYFRLENINNPKLLVKSVIDYDVVQKISLVLHVQDTF
NGSASNEPFFTSVATITVHVRDVDNRPPWFHPCVRTNLGLAKVCVSTGYRGKVNLTEKEE
GPLSLEPGPVLAKDGDKNRSEQISYRILRGNEGNIFQIHEETGNISMIKAADILGPITLT
VLASQVTNRDQFAVTQVIFDVMKKSRNPPQFEKERYEGFIYTNSIPESMILRDRSSNRPF
RVRARDEDFASGVNPDVKYEVQYSSYVNVTTDGFVILKRVVKTESFALQLRAVDTTTGEF
GTAALSVQVIPANAMPSPSNVGYRAGDMALLGLVMAALLVLCFTVIGFLISRLWKGNSRV
DKICECLDCLKSKQPNTSHRDSLQFTNDGFQNEPDGSCGHWKNTFPRRSTFPGGRVMPLG
RRNRHCASCGVFTKHVPKGSPSLRPSRRGRGDGDDYRSRSILAKQRRKEGQKTVWFKELK
DSSDIEVEIIPDIVGQVEEETQEELEGELVMEAVVNDPFAESEDGQKNNHMEPKAEHNHG
STNSEKEKETNDQDG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctcagtttgcacagtgcctgctgggcctgtgcctgtgcccgagaacagcact
gctgacctccaggtggttaaaataaactctggcagtgatgtgacactgactgttgtggtg
aaccccgaagaaatgttttacctgaaaggcaaaacattaatggtgaagaaagaactggac
tatgaggttttacctaagagagcagctctcgtggtgtgggtacaatgtagcagagcaggc
tccaaatctgtcaatgagtccattgaagtattggtggagaatgtaaacgataacccccca
aactttgctcagaataactacattctggaagtaaatgagctgactccagtaaattccagc
ataggactgatagaagctactgatgctgattctgaaccactattttatcggttagagtct
gccatggataaatacttccggctcgagaacatcaacaatccaaaattacttgttaaaagt
gtgatagactatgatgttgtgcagaaaatctcattggttttacacgtacaggacacattt
aatggttcagcctccaatgagcccttcttcacatcagtggccaccatcacagtgcatgtg
agggatgtggataatcggccaccatggtttcacccttgtgtaaggactaatttaggactt
gccaaggtgtgtgtgagcactggctatcgaggcaaagtcaatctgacagagaaggaggaa
ggcccactatcactggaacctggcccagttcttgcaaaagatggagacaagaacaggagt
gaacagatcagctaccggattttaagaggcaatgaaggcaatatattccagatacatgag
gaaactgggaatataagcatgatcaaagctgcagatattttgggcccaataactctcact
gtgctggcatcacaagtgaccaacagggatcagtttgctgtaacacaagtgatctttgat
gtgatgaagaagagcaggaaccctcctcaatttgagaaggaacgttacgaggggtttatc
tacaccaactctatacctgagagcatgatccttagagaccgtagtagtaacagacccttc
agggtccgagcgcgagatgaggattttgccagcggtgtgaatccagatgtaaaatatgaa
gtgcaatacagcagttatgtcaatgtgaccacagatggttttgtgatactgaagagagtt
gtcaagacagagtcatttgcactacagcttagagcagtggacacaactactggagagttt
ggtacagccgccctctctgttcaagttatacctgccaatgccatgccgtccccgtcaaac
gttggctaccgtgctggcgacatggcactccttgggctggttatggcagctttgctggtt
ctctgcttcactgtgattggcttcttgatttcccgcttgtggaagggcaactccagagtg
gacaaaatatgtgagtgcttggactgtctgaaatctaagcagccaaatactagccacaga
gactccctgcagttcaccaatgatggcttccagaatgagccagacggaagctgtggccac
tggaagaacacctttcccagacgaagtaccttccccgggggccgagtcatgcccctgggt
agacgcaaccgccactgcgcctcctgcggtgtcttcactaagcacgtccccaaagggagt
ccctcactaagaccatccaggagaggtcgaggagatggagacgattaccgctcaaggtcc
atcctggccaagcagaggaggaaggaggggcagaagactgtgtggttcaaagaactcaaa
gactcttcggacattgaggtggagattatccccgacatagtgggccaggtggaggaagag
acacaggaggagctggagggggagctggtgatggaggcagtagtcaacgacccatttgca
gagtctgaagatggacagaaaaacaaccacatggagcccaaagctgaacacaaccacggg
agtaccaactcagaaaaagagaaggaaacaaatgatcaagatggctga
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