Syngnathoides biaculeatus (alligator pipefish): 133497531
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Entry
133497531 CDS
T09681
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133497531 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Cadherin related
133497531 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Cadherin_pro
CADH_Y-type_LIR
Ig_Shg
EGF
hEGF
Cadherin_4
EGF_2
Big_9
GspA_SrpA_N
Motif
Other DBs
NCBI-GeneID:
133497531
NCBI-ProteinID:
XP_061669463
LinkDB
All DBs
Position
3:1367860..1598798
Genome browser
AA seq
2919 aa
AA seq
DB search
MIWGSLLPLLLWSALANRTLEPVPFFHGHVFENASPGSRVNGLSVPLRRLNSRRLSSELC
AQPRWRLLGDGGDRFRVLAHHKRGHVLLRTCGLLDREERAEYALGVGACCGGPCAEVASV
KVDVLDINDHRPAFRGADVTLSLDDATPLRTVVYTVAARDEDSGKNAELFYFAAPKNGTF
YVVPKSGDVLLVDSILGRDGPIKFTVFARDRGWPPLTSEGIGVEVRPRQWLSAPREKSPG
RTSRTVRDAEGSPLSINVSEDAGIGSVVMNLNPVRFQAASFELVEPDAESSPVSVARDTG
DIVIARRLDRETEPLVEICVRVRDKRGPDWYLVRVELTVTDVNDNVPEWRMAPTPYLAVV
SPDASAGSLVYQLHAQDGDEGLNGDVEFFLVDGGDGRFEVDRKSGQVRTTGLPLQRDREY
LLTAVAADRLGSRSVPAVVSVVAGARPPQFANASFTVAVPENTPEGQPFLATTAVSFQKQ
PVGYSLLINPSSLFSISPEDGRISLTRPIDYESDQRRYLLLVRAGEGQDSMSSAAEVRVI
IEDENDCVPEFLQSIYSKDGVPETVTTATSLLQVSASDCDSEKNAELTYYTLSPDFTVSP
HGTIFPAGPLDYERPNHLYEFVVMAVDKGQVPRTGTATVRVRMANVNDEPPEFSQHAYRT
FVSEDAGPNTLVATVLAKDPDGDGITYRIASGNEEGNFVIDSQKGLIRLRSSPPPQLRGV
EYVINVTATDDNASGGPRALSSTAQVVVGVDDVNNNKPVFEKCQEYREKTTVLENQPAGT
FVLQVRAADADEGSNGKVTYGFMHKDSTVPAFSIHPDSGTIVTARKFDRERQREYAVTVT
ATDRAADPLIGICQLNILIVDQNDNSPKFENIRYEYFLREDTMIGTSFLRVAAHDDDFGT
NAAVTYSVSGEQPEYLRVNPLTGWVFVNQPISQRSYITREIVATDGGNRSSSVELAVTIT
NVKNQPPQWEKPSYAVVVPENTVRDTPIVTVKATSPLGDPRVTYNLEDGMVPETNMPVRF
YLTPNREDGSASVLVAEPLDYETTRNFMLRVRAQNVAAVPLAAFTTVYVNVTDVNDNVPF
FTSSIYEASVTEGAQSGTLVFQVSATDMDLDLNGKIAYSLLEDRSGDHQFFRIDPELGFI
YTQTVFDRETKSSYLLEVQSVDGWESARPGKHGQPNSDTAYVRVFISDVNDNKPAFAQTT
YEVDADEDADVGFAVLTVSANDGDEGGNAKLRYQITSGNTGGVFDVEPEVGTIFVAQPLD
YEQNRRYKLHVVASDGKWEDYATVSVNVVNKNDEAPVFTVNEYYGSVTEELDGSPVFVLQ
VTASDPDKDADQEALRYSLHGQGADSEFLIDEVTGKIYAQRTLNREERAVWRFVVLATDE
GGEGLTGFTDVIINVWDINDNAPVFTCAPSCHGDVAENSPAGTSVMEMTAGDLDDAAVGQ
NAVLSYRIVGGLDETGGVPAFAEMFAINHATGTISVAMGGLDREQVESYMLVVEARDGGG
MAGTATATIQVTDVNDHAPNFLQHVCLARISENAEPNAEVLELRAEDRDTGENGQLTFSV
VAGDQEQKFYVVSNKAEQRGSLRLKKRLDYEKHSEQRFNLTVKVEDLDFSSLLHCTVEVD
DYNDHAPVFIPHFLSLGPLSEDVPAGTSVARLAASDSDSGQNRQLVYSLSRDSDPDGLFA
VDQSGVLTVARPLDRERTAQHRLVVVATDQGAPALSGSATVELPLLDVNDNGPQFEAAYD
PVVFENLPGPQVVSVNRTSTLLRAVDRDSPENGAPFRFAVPDDYRYGNDFYLKDNLNGTA
TLTALRTFDRERQKEFPIPVVMSDSGRPAKTVTATLTVTVGDYNDHAHVGGEKTVFVNTY
RGRMPTTVLGKVYAPDPDDWDNKTYVFEGHVPTYFILNKRTGFVIIKENAPAGDYHFLVR
VGDGVWPDAISAVTVHVRELPDDAVHNSASLRLADMTANEFMEPRGKQRSRFELLSDFLS
EMLSASPSAVYVFGLSDAPGRMLDVRFAVRVAGAFLRPEKIHGYLAAHKQKLQSFLQVRV
FQVRVDECPRSECGGAGGCSSVVGVRDAPTVADCGPRTLVSVTVEAAAVCACPGRQQTHQ
PCDAYPENPCSNGGVCVDTQHGYRCQCPAQLEGPECQQNKHSFRGDGYAWFPPMTPCFES
HVSLEFITEVPDGLLLYSGPLAQLQAWDHEDFVALELIDGTPTLKINHGSGTVVLQLPGN
VNVADRRWHRLDVRSDGKEVRLTLDRCSGAPVTEMEGLGSWLTTEDHSSCEVSGTTPNTD
RYLNSSQVLQLGGVNEDIPYIYPQLQHKHFTGCIRNLVVDSKLYDLSSPADSRSSSPGCQ
TTDGGCVNMGYPSCGRRGRCHGEWGSFSCQCVPGYSGQQCDQEVPEYSFDGRGHVRYQLA
SPLPPRRTAVQILVRTRKHSSAVLSLSSREQSEYLRLEICQGLLGVFYNLGDGDHNLTLP
TYRLDNGEWHQISLERHDNEMTLQLDGGGGRREVTGAPGRSREIVIDPTAVILGNAFPSA
LNKSFQGCMRDLRLNGRHLPMDGRTAPEGVSQIAAQGLAPGCPSDSCRRNQCSPPFTCVD
LWRVHECRCPPGHMVRVNGSRKSCVYTLCATRPCHRGTCVAQSPSAFTCRCPDGHRGRLC
ETALAVYGDRVGLSFSSLFAICVCFMALLALLLAIFVYTRWRSHKGPKEGVYHVSAHHDG
WEDVRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSLQYCRSRALRRPPPPAPPPP
HHRRQQQQQHLLHQAPPAQARAQPPAGTPPPSSASSSASGTARGPRRDVPPPARSPARGQ
ARPPRRSLSFSSQDLARYLCEIIRDADRHPDTGPFDSLQVFSTEGGGTPAGSLSSFSSAG
SDAGEGAASDARRQETLGDWGPRFEKLRALYERAETSDL
NT seq
8760 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggaagccttctgccgcttttgctgtggtccgcgctcgccaacaggactttg
gagccggtgcccttcttccacggccacgtgttcgagaacgcgtcgccgggctcccgggtc
aacgggctgagcgtgccgctgcggaggctcaactcgcggcggttgtcctccgagctgtgc
gcccagccccgctggaggctcctgggcgacggcggcgacaggttccgcgtcctggcgcac
cacaagcgcggccacgtcctgctcaggacctgcgggctgctggaccgcgaggagcgggcc
gagtacgcgctgggggtcggcgcgtgctgcggcggaccgtgcgcggaggtggcgtccgtc
aaagtggacgtgctggacatcaacgaccaccggcccgccttccggggcgccgacgtgact
ctgagcctggacgacgccaccccgctgcggacggtggtctacacggtggcggcgcgggac
gaggacagcggaaagaacgcggagctcttctacttcgccgcgcccaagaacggcactttc
tacgtggtgcccaaaagcggcgacgtcctcctggtggactccatcctgggccgggacgga
cccatcaagttcaccgtgttcgcccgcgaccgaggctggccgcccctcaccagcgagggc
atcggcgtggaagtcagaccgcgccagtggctctcggccccgcgagaaaaaagtcccgga
cggacgtcccgaaccgtccgcgacgccgagggcagcccgctgtccatcaacgtgtccgag
gacgcgggcatcggctcggtggtgatgaacctgaacccggtccgcttccaggcggcctcc
ttcgagctggtggagcccgacgccgagagctcgccggtcagcgtggcccgggacacgggg
gacatcgtcatcgcgcgacggctggacagagagacggagccgctggtggagatctgcgtc
cgggtgcgcgacaaaagagggcccgactggtacctggtccgagtggaattgacggtgacc
gacgtgaacgacaacgtccccgagtggcgcatggcgccgacgccgtacctggcggtggtg
tcgcccgacgcctcggccggctccttggtctaccagctgcacgcccaggacggcgacgag
gggctcaacggcgacgtggagttcttcctggtggacggcggggacggtcgcttcgaggtg
gaccgcaagagcggtcaggtgcggaccaccgggcttccgctgcagcgcgaccgcgagtac
ctgctgacggcggtggccgccgaccggctggggagccgcagcgtcccggccgtcgtgtcg
gtggtggcgggggccaggccgccccagttcgccaacgcctccttcaccgtggccgtaccg
gagaacacgcccgagggccagcccttcctggcgacgacggccgtctccttccagaagcag
cccgtcggctacagcctgctgatcaaccccagcagcctgttctccatctcgcccgaggac
ggccggatcagcctgacccggcccatcgactacgagagcgaccagcgccgctacctgctg
ctggtgcgagccggcgagggccaggacagcatgagcagcgccgccgaggtgcgagtcatc
atcgaggacgagaacgactgcgttcccgagttcctgcagtccatctacagcaaggacggc
gttcccgaaaccgtcacgacggccacgtcgctcctccaagtgtccgccagcgactgcgac
tctgagaaaaacgccgagctgacgtactacacgctgagtcccgacttcaccgtgtccccg
cacggcaccatcttcccggcggggcctctggactacgagaggcccaaccatctgtacgag
ttcgtggtgatggcggtggacaagggccaagtaccgcgcaccggcacggccacggtcagg
gtgcgcatggccaacgtcaacgacgagccgcccgagttctcgcaacacgcctaccggacg
ttcgtgtctgaggacgccggccccaacacgctggtggccaccgtgctggccaaagatccc
gacggagacggcatcacgtaccgcatcgcttcgggcaacgaggagggcaactttgtcatc
gacagtcagaaaggtctgatccgtctccgctccagccccccgcctcagctccggggcgtg
gagtacgtcatcaacgtgacggcgacggacgacaacgcctcgggcgggcctcgggccctg
tcttccacggcgcaggtggtggtcggcgtggacgacgtcaacaacaacaagcccgtcttt
gagaagtgccaagagtaccgggagaagacgacggttctggagaaccagccggccgggacc
ttcgtgctgcaggttcgcgccgcggatgccgacgagggttccaacgggaaggtgacgtac
ggcttcatgcacaaagactccaccgtgcccgccttcagcatccaccccgactcagggacg
atcgtgacggccaggaagttcgatcgcgaacgccagcgcgagtacgcggtgacggtgacg
gccaccgaccgggccgccgacccgctgatcggcatctgccagctcaacatcctcatcgtg
gaccagaacgacaacagccccaagtttgagaacatccgctatgagtattttctgcgggaa
gacacgatgatcgggaccagcttcctgcgagtggcggcccacgacgacgacttcggaacc
aacgccgccgtcacgtactccgtgtccggcgagcagccggagtacctcagggtcaacccg
ctgaccggctgggtgttcgtcaaccagcccatctcgcagaggagctacatcacccgcgag
atcgtggccacggacggcggcaaccgcagcagctcggtggagctggcggtcaccatcacc
aacgtgaaaaaccagccgccgcagtgggagaagcccagctacgccgtggtcgtgcccgag
aacaccgtgcgggacacgcccatcgtgacggtgaaagccacctccccgctgggggacccc
agggtgacgtacaacctggaggacggcatggtcccggagaccaacatgccggtccgcttc
tatttgacccccaaccgggaagacggctcggcctccgtccttgtggcggagcctctggac
tacgagaccacccgcaacttcatgctgagggtccgagcccagaacgtggcggccgtcccg
ttggctgccttcaccacggtctacgtcaacgtcacagatgtgaacgacaacgtccccttc
tttacctcgtccatctacgaggcctcggtcaccgagggcgcccagtcgggaactttggtg
tttcaggtgtccgccaccgacatggacttggacctcaacgggaagatcgcctattcgctg
ctcgaggatcgcagcggggaccaccagtttttccgcatcgaccccgagctgggtttcatc
tacacccagaccgttttcgatcgcgagaccaaaagttcatacctgctggaggtccaatcg
gtggacggctgggagtcagcgaggcccggaaaacacgggcagcccaactccgacacggcg
tacgtccgcgtgttcatcagcgacgtcaacgacaacaagccggcgttcgcccagaccacg
tacgaagtggacgccgacgaggacgccgacgtgggcttcgctgtcctcaccgtcagtgcc
aatgacggcgacgaaggcggcaatgccaaactgcgctaccagatcacgtccggaaacacg
ggaggcgtgtttgacgtggaacccgaagtggggaccatcttcgtcgctcagcctttggac
tacgagcagaacagaaggtacaagctgcacgtcgtggcttccgacggcaagtgggaggac
tacgccacggtgtcggtcaacgtggtcaacaagaacgacgaagcgcccgtgttcaccgtc
aacgaatactacggcagcgtgacggaggaactggacggctcgcccgtctttgtcttgcag
gtgacggcgtccgacccggacaaggacgccgaccaggaggctctgcgctactcccttcac
ggccagggcgccgacagcgagttcctcatcgacgaggtgacggggaagatctacgcccag
aggacgctgaaccgcgaggagcgcgccgtctggcggttcgtggtcctggccacggacgag
ggcggcgagggcctgacgggcttcaccgacgtcatcattaacgtttgggacatcaacgac
aacgcgcccgtcttcacctgcgcccccagttgccacggcgacgtcgccgagaactcgccg
gccggcacgtcggtgatggagatgacggccggcgacctggacgacgcggccgtgggccag
aacgccgtcctgtcctacaggatcgtgggcggtttggacgagaccgggggcgtccccgcg
ttcgccgagatgttcgccatcaaccacgccaccgggaccatctcggtggccatggggggt
ctggaccgggagcaggtggagtcctacatgctggtggtggaggccagagacggcggcggc
atggcggggacggccacggccaccatccaggtcaccgacgtcaacgaccacgcgccaaac
ttcctccaacacgtctgcctggccaggatctcggaaaacgctgaacccaacgccgaggtc
ctggagctgagggcggaggaccgcgacacgggcgaaaacggccagctgaccttcagcgtg
gtggccggagaccaggagcaaaagttctacgtggtcagcaacaaagcggagcagcgagga
agcctcagactcaagaagcggctcgactacgagaaacacagcgagcagcgattcaacctc
accgtcaaggtggaggacttggacttctccagcctgcttcactgcacggtggaggtggac
gactacaacgaccacgccccggtcttcatcccccactttctgtctctggggcccctctcg
gaggacgtccccgcggggaccagcgtggcccgcctggcggccagcgactcggactcgggc
cagaaccgccagctggtctacagcctgtcccgggactcggacccggacgggctcttcgcc
gtggaccaatcgggcgtcctgacggtggcccggcctctggaccgggagaggacggcgcag
caccggctggtggtcgtcgccacggaccagggggcgcccgccctgtcgggcagcgccacc
gtggagctccccctgctggacgtcaacgataacgggccgcagtttgaggccgcgtacgat
ccggtggtgtttgagaaccttccgggacctcaggtcgtgagcgtcaaccggacgtccacg
ctgctccgagcggtggaccgcgactccccggagaacggcgctcctttccgcttcgccgtc
cctgacgactatcgctacggcaacgacttctacctgaaggacaacctgaacgggacggcc
acgctgacggcgctgcggacgttcgaccgcgagcgtcagaaggagttccccatccccgtg
gtcatgagcgacagcggccgtcccgccaaaaccgtcaccgccacgctgaccgtcaccgtc
ggcgactacaacgaccacgcccacgtcggcggggagaagaccgtcttcgtcaacacgtac
agaggccgcatgcccaccaccgttttggggaaggtgtacgcgcccgacccggacgactgg
gacaacaagacgtacgtctttgagggacacgtacccacctacttcatcctgaacaagcgc
acgggcttcgtgatcatcaaggagaacgcccccgccggcgactaccacttcctggtgcgc
gtgggcgacggcgtgtggcccgacgccatctccgcggtcaccgtgcacgttcgagagctc
cccgatgacgccgtgcacaactcggcgtcgctccgcctcgcagacatgacggccaacgag
ttcatggagccgagggggaagcagcgcagccgcttcgagctcctgtccgacttcctgtcc
gagatgctgtcggcgtcgccgtccgccgtctacgtgttcggcctgagcgacgcccccggc
cgcatgctggacgtgcgcttcgccgtgcgcgtcgccggcgccttcctgcggcccgagaag
atacacggttacctggcggcgcacaagcagaagctccagtccttcctgcaggtccgagtc
ttccaggtgcgcgtggacgagtgcccccggtccgagtgcggcggggcgggcggctgctcc
agcgtcgtcggcgtccgggacgcgcccaccgttgcggactgcggccccaggactttggtc
tccgtcacggtggaggcggccgccgtctgcgcctgccccggacgccagcagacgcatcag
ccgtgcgacgcttaccccgagaacccgtgctccaacgggggcgtgtgcgtggacacgcag
cacggctacaggtgccagtgcccggcccagttggagggccccgagtgccagcagaacaag
cacagtttccgcggcgacggctacgcgtggttcccccccatgacgccgtgcttcgagagc
cacgtctcgctggagttcatcaccgaggtgcccgacggcctgctgctctacagcgggccc
ctggcgcagctgcaggcctgggaccacgaggacttcgtggccctcgagctcatagacggg
acccccacgctgaaaatcaaccacggctccggcacggtggtgctgcagttgcctggcaac
gtcaacgtggccgacaggcgctggcatcggctggacgtccgcagcgacggcaaggaggtg
cgcttgacgctggatcgctgctcgggggcgccggtcacggagatggaaggtctgggaagc
tggctgaccaccgaggaccactcgtcctgcgaagtgagcggcaccacgcccaacacggac
cgatacctcaacagcagtcaagtcttgcagctgggcggagtcaacgaggacattccgtac
atttaccctcagcttcaacacaaacacttcacgggatgcatccgcaacctcgtcgtggac
agcaagctgtacgatctgagctccccggccgactcccggtccagctccccgggctgccag
accaccgacggcggctgtgtcaacatgggctacccgtcgtgcggacgccgcggtcgctgc
cacggcgagtggggctccttcagctgccagtgtgtgccaggatacagcgggcaacagtgt
gaccaggaggttcccgagtactccttcgacggccgcggtcacgtgcgctaccagctggcc
tcgcccttgccgccccggaggacggcggtgcagatcctggtccgaacccgcaagcacagc
agcgccgtgctcagtctgagctccagagagcagagcgagtacctgagactggagatttgt
caaggcctgctgggcgtgttctacaacctcggcgacggcgaccacaacctgaccttgccc
acgtaccgcctggacaacggcgagtggcaccagatctcgctggagcgccacgacaacgag
atgacgctgcagctggacggcggcggcggccggcgggaggtgacgggggcgccgggccgc
agccgggagatcgtcatcgaccccaccgcggtcatcctgggcaacgccttcccgtccgcc
ctcaacaaaagcttccagggctgcatgagggatctgcggctgaacggccgccacctgccg
atggacggccggacggcgccggagggcgtctcgcaaatcgccgcccaaggcctcgccccg
gggtgcccgtccgactcgtgcaggaggaaccagtgcagcccccccttcacctgcgtggac
ctgtggcgggtgcacgaatgcaggtgccctccgggccacatggtccgcgtgaacggcagc
aggaagtcctgcgtgtacactttgtgcgccacgcgcccgtgccaccgcggcacgtgtgtg
gcgcagtcgccgtccgccttcacctgccgttgccccgacggccaccgggggcgcctgtgc
gagaccgcgctggccgtctacggcgaccgcgtcggactcagcttcagctcgctcttcgcc
atctgcgtctgcttcatggcgctgctcgcgctgctgctggccattttcgtgtacacgcgc
tggaggagccacaagggcccgaaggagggcgtctaccacgtgtcggcgcaccacgacggc
tgggaggacgtccgcgagaacgtcctcaactacgacgaggagggcggcggcgaggaggac
cagaacgcttacgacatggccgaactccagaagtcgcttcagcccagcccggcgcagtcg
ttgcagtactgccgttcccgagcgctgcgccgcccgccgccaccggcgccgccgccgccc
caccaccgccgccagcagcagcagcagcacctcctccaccaggccccgcccgcccaggcc
cgcgcccaaccgcccgcgggaacgccgcccccgtcgtcggcgtcctcgtccgcctcgggg
acggcccgagggccgcggcgagacgtgccgccgcccgcccgctcgccggcccgggggcag
gcgcggcccccccgccgctcgctttctttctccagccaggatctggcccgctacctgtgc
gagatcatccgcgacgccgaccggcacccggacacggggcccttcgactccctccaggtg
ttctccaccgagggcggcggcaccccggccggctcgctcagctccttcagctcggcgggc
tcggacgccggcgagggggcggcgtcggacgcccggcgccaggagacgctcggggattgg
gggccgcgcttcgagaagctgagggcgctgtacgagcgggccgagaccagcgacctttga
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