Syngnathoides biaculeatus (alligator pipefish): 133497532
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Entry
133497532 CDS
T09681
Symbol
spg11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133497532 (spg11)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133497532 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
DUF6883
Motif
Other DBs
NCBI-GeneID:
133497532
NCBI-ProteinID:
XP_061669464
LinkDB
All DBs
Position
3:2479273..2506018
Genome browser
AA seq
2372 aa
AA seq
DB search
MAETSLASALEVVLLPGKRHWREVADVVKAQLAPGGTWLGCLELDGTLVLWDPAEEEAAP
VLLDGLYQDFTWEESVIARAGGGGTKRLLAVGSNCQLMMLEVDARSGTSLSVRPAGECPV
QRLLQDEGVCAPRAARVLSFASGQCQVLLDGERLLRLEWSPGQEAARTLSCCDLSPADGG
AAAAVHCCVRQHFAFSLSESGLVSIYDVTDGVLLAFVDVPAYLCGGPAEEREAGASWSRL
RLLEVSADVSTAVVVARDNAVAAIDLDHYFRKNPEHLLCQATPARPPLRPQRPTDEDNLT
SANCSLAALGRDFNADRSWGSRLTSMFNAAQKSSSWSALRPVTTSWSSSLPGHESLPAAP
LSRPRIPPGGAAVALAVPESSVPSLLSVCDFSAMLVLAPLANTQTTAVLWDLGSGNVSYH
RAGAERAAAVVELCGQKHHAVLLKKTGMFQVLFSVSQQDLLSSLMMFGSAATVDALCHLN
NWGRCSIPIHSLKAGVKNRQLDTVDFYLKSKEDLLKAPSNTSFTERIKTVCPALDLLCAA
IRESSNDAQSRQFSEQLLNVTLSFVNAQIRYMLTHMSYEDDDVRRCVDILNEYLTELRTF
MRKYPWPAQGAKDDKEQASAEEDEKDEWDGLCTEEVVRLSVLTNQIPRAQAVFRRRGLPE
GRLPALRATGLRLVYSCLQGRDLPTAVTLLTNMGFNVKKELHRICIYTHDRDLRDFVGDE
LRRRRYFSEEELSSVAFIKEAINLASLPHRRQADAASGRRPLQLVLHEEAAGGADVLDEL
LGRNTSEQEEAGLWQEVRLDWVMNWERSSRAAILLSRQQHYELGWCDGAVLWCHMTSFHN
RAALVSWTESGEASGAARWPKLTAEVVNSSTLSSRFLREEILDTLARRAVFIPDELSDLD
QLLWRLAQGGGLMTSTPPPVPRHLALDFHSRVIGWCLERQLQYLLYTYLEHYRLTPRNCP
ALSSGGPTHLQPWSEMIVNMQEITTNLTEPALVYQASLTCAQVVLPGSPPSLSSLLLEGH
SLLALATIMFAPGGIDRAVVQGENRSLAECSVDPQLMKMALTAYPKLKAALFPAGPRGPG
PFADVSVYHLLQGLHPLDPCRLFGWQAANSLNSSETTELPHFSSPHLVDAFALVERLDFL
YYLRHGRPAVAFATFVLQQLIGCRRVGHTLQQARRRVHVLAVQSFNSPSAVSAAVCFCEL
LGLSSHQIRVDVKVIKAVWTHWKVKRAHCGHTHTLHTLVSKGVELVEAEPGAAEELIGYL
EAAVIDSLEVKDVNRCSWEAAQDWSLPVEFCRLHGLPLSGVYPAHCARDGHFLNFLLFVQ
LHHFTAQQVGSLVSQFSPTLQDHLHVAFGELPFYSSGAPASPRGLFQLLLRSQEEAEPSS
YLLQEALTHRSPSLAVLAACVQEAALVPCLCVWLLTVIDNVSARELTARLSAPAEPHQWG
LHHLSIIWRSLLGRGLPGAQTLLRGFRLFMRDCPLLDVLSMFLLCCDHKNFTKAKVKLQN
FHTNITSLSISGEAPPGGLLLQWLCSEAWFLLLHLCHCARSHFELRRLLQVLADVDMMNK
DNGPDFRKLSRLSDLLQGSGVAVSPRLLQCNSASIQQEELQATVDALQARGFYARAQSVA
TVAQLPVQRLLMCQLAQELALQRSKRQWSRPESRVCFWRKCHRQLEVERVDPDSASRFFL
SQADRALSESSTASDFQSELLAVREGCLLLAAAARWLSLRRPVPVERIQDLEKRLWVGRV
RQHTLVAAIRTDSVFNLLPPDVNAYDLFMKDFSFCDIPELRTDTLLSPEGLPGPAEEHVD
VDPLLQPAEKKTLALLLDEALDAGSVHEVSRACRYFSLYHPDLWLLLRCRALASGELGPQ
TLQTPLTPDDPEVPPRRLLHASPSVSSLSSFVLLPPLPEDDVAVHLQKMAEQCRHGNNDC
KQVLSLYQLSKELQCSFSELSNEDPGRVLEKLLLRDHPEGFRNAQMFIRAQSFSADAVAE
MVAAALVRAKQEQHARQTERQAFRPAEARDSLVQLITLCEDPNLVGLKVLEKLKSVPLRD
LGCIVELLIAAHDCFSVTCNMEGIVRVLQAARHLSHAYLAPGEHYGLLVRMLTGIGRYNE
MTYVFDLLHQNHRFEMLLRKKTDMDRGQSSGLKTALLDYIKRCLPADSEKHNMVALCFSM
RREIGENHEMAARTQLKIIQSQAWAVSSPELKSSLLKVLSLLKDAAESFTKDSCVHQASR
CVRLAKLVTLQLHFLNHGSALRLVNLQPADMMDAAAALPRCYQVLVLSEAYGYSPDWAEL
VYQKTVLNADFAYLDELRRLRPLTSSLFEDIFKKLDGAPCGASANVRRLLTYCDDIYLRY
RLAYQRQLDDVTQALLQDAAASSYLNDAIGAH
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacctccttggcgtccgccctagaggtggttcttctgccgggcaagcggcac
tggcgcgaggtcgccgacgtggtcaaggctcaactggcccccggcggcacttggctcggc
tgcctggagctcgacgggacgctggtgttgtgggacccggccgaggaggaggctgctccg
gttctgctggacggactctaccaggactttacctgggaggagtctgtgatcgctcgggct
ggaggaggcggaaccaagcgcctgctggctgtgggttccaattgccagctgatgatgttg
gaggtggacgcccggagtggaacgtcgctctcagttcgcccagctggcgagtgccctgtg
cagcgcctcctgcaggatgagggtgtgtgcgccccgcgggcggcgcgggtgctgtcattc
gcgtcgggtcagtgccaagtgttgctggacggcgagcggctgctgcggctcgagtggtca
cccgggcaggaagccgcacggacgctgagctgctgcgatctgagcccggcggacggcggc
gccgcagccgccgtgcactgctgcgtgcgacaacacttcgccttcagcctcagcgagagc
ggactcgtctccatctacgacgtcacggacggcgtcctgctggccttcgtggacgttccc
gcctacctttgcggtggcccggcagaggagagggaggccggcgcgtcgtggtcgcgcttg
cgcctcctggaggtgtcggccgacgtgagcacggccgtcgtcgtggcgcgcgacaatgcc
gtcgccgccattgaccttgaccactacttcaggaagaacccagagcacctgctgtgtcag
gccacgcccgcccgcccgcccctgagaccccagcgaccgacggacgaggacaacttgacg
agcgccaactgcagcttggccgcgttgggacgcgacttcaatgccgaccggtcttggggg
tctcgcctgacgtccatgtttaacgcggcccagaagtcctcctcgtggtcggcgctccga
ccggtcaccacttcctggtcctcgtcgctcccgggccacgagtccctcccggccgcaccc
ctgtctcgcccccgaatccctcccgggggagccgccgtcgccttggccgtcccggagtcg
tccgtcccgtccctgctgtccgtctgcgacttctccgccatgttggtgttggcgccactc
gcaaacacgcagaccaccgccgtcctgtgggacttggggtccggcaacgtgagctaccac
cgggcgggggcagaaagggcggcggcagtggtggaattgtgtgggcagaaacatcacgct
gtgcttctcaagaagacggggatgttccaggttctgttctcggtgtcgcagcaggacctc
ctgagcagcttgatgatgtttggcagcgcggccaccgtggacgcgctttgtcacctcaac
aattgggggcgctgctccatccccatccactcgctgaaggcaggagttaagaaccggcag
ctggacacggtggacttctacctgaagagcaaagaagatcttctgaaggcgcccagcaac
accagcttcacagaacgcataaagacggtatgtcccgccttggatctgctgtgcgccgcc
atccgggaatcgagcaacgacgcgcagagccgccagttctcggagcagctgctcaacgtg
acgctgagcttcgtcaacgcgcagatacgctacatgctaacgcacatgagctatgaggat
gacgacgtgcgcagatgcgtggacatcctgaacgagtacctgacggagcttaggaccttc
atgaggaaatacccgtggcctgcacagggcgccaaagacgacaaagagcaagcatctgcg
gaggaggacgagaaggacgagtgggacgggctttgcacagaggaagtggtccgcctgtcg
gtcctgaccaatcagatccccagagcccaggcggtgttcagacggcgaggcctccccgag
ggccgtctcccggccctgagggcgacgggtctccgcctggtctactcgtgtctgcaggga
cgagacctgccgacggccgtcacgctcctcaccaacatgggtttcaacgtgaagaaggaa
ctgcatcgcatctgcatctacacgcacgacagggacctcagggactttgtgggagacgag
ctgcgcagacggcgttacttttctgaggaggagttgagcagcgtggcgttcatcaaggag
gcgataaatttggcgtctctaccgcatcgccgtcaagcagacgccgcttcgggacgcagg
ccgctacagctagtcctgcacgaggaagcagcggggggcgccgacgtcctggacgaattg
ctgggacggaacacgagtgagcaggaagaggcggggctgtggcaggaagtgaggctggat
tgggtgatgaattgggagcggagcagcagggcggccatcttgttgtccagacagcagcat
tacgagttgggctggtgtgacggtgcggtgctgtggtgtcacatgacttcgttccacaac
cgcgccgccctggtgtcctggacggagagcggcgaggcctccggcgccgcccggtggccg
aagctgacggcggaagtggtcaacagcagcacgctgagcagccgcttcctcagggaggaa
atcctggacacgctcgccaggcgggccgtgttcatccccgacgagctgtccgacttggat
caacttttgtggcgcctagctcagggcggcggtctgatgacgtcaacgccgccgcccgtc
cctcggcacctcgccctggacttccattcgcgggtcatcggttggtgtctggagcgccag
ctgcagtatctcctttacacctacctggagcactacaggttgactcccaggaactgtccc
gcgctgtccagcggcggcccgactcacttgcagccttggtcggagatgatcgtgaatatg
caagagatcaccactaacctgacagagccggcgttggtctaccaggccagtctgacttgc
gctcaagtcgtcctaccggggagcccgccgtcgctcagttctcttcttctggagggtcac
agcctgctcgccctcgccaccatcatgtttgccccggggggcatcgaccgggcggtggtc
cagggtgagaaccgttccctggcggagtgctcagtggaccctcagctgatgaagatggcg
ctgacggcgtaccccaaactgaaggcggcgctgttcccggcaggaccgcgagggcccggc
cccttcgcagatgtgtccgtgtaccacctcctgcagggactgcatcctctggacccttgc
cgactgttcggctggcaggcggccaactctctgaactcctccgaaacgacggagctacct
cacttctccagcccgcacctggtggacgccttcgcgctggtggagcggctggacttcctg
tactacctgcgacacggccgtccggccgtcgcctttgccaccttcgtgctccagcagctg
atcggctgccgccgcgtcggccacactctgcagcaggcccggcggcgggtgcacgttttg
gccgtgcagagtttcaactcgccgtcggcggtgtcggccgcagtttgcttctgtgagctt
ctcggcctcagcagccaccaaatccgagtggacgtcaaggtcatcaaggccgtctggacg
cactggaaagtcaagcgagcgcactgtggacacacacacactttgcacacactggtgtcc
aaaggggtcgagctggtggaggcggagccgggagcagctgaggagctgattggctacctg
gaagctgctgtgattgacagcctggaagtcaaagatgtcaacagatgttcgtgggaggcg
gctcaggactggtcgttgccggtggagttttgtcgtcttcacggacttccgctcagcggc
gtttatcccgcccactgtgcgcgcgacggacacttcctcaatttcctgctgttcgtgcag
cttcatcacttcacggcacagcaggttggctctctggtgtctcagtttagccccaccctc
caggaccaccttcacgtggcgttcggcgagctgccgttctactcctcgggggcgccggcg
tccccccggggcctcttccagttgttgctgcggagtcaggaggaggcggagcctagcagt
tacctgctgcaggaggcgttgacgcatcgcagcccctcattggccgtgcttgctgcctgt
gtgcaggaagctgcgctcgtgccgtgcctctgcgtgtggcttctcaccgtcatcgacaac
gtcagcgcccgggaactcaccgcccgcctgtcggcacccgctgagccccatcagtggggc
ctgcaccacctgtcaatcatctggaggagcctcctgggccggggcctgccgggggcccaa
accctcctgcgggggttccgactcttcatgagagactgccccctgctggacgtgctcagc
atgttcctgctgtgctgcgaccacaaaaacttcaccaaggccaaagtcaaactccaaaac
ttccatacgaacatcaccagcctgagcatcagcggcgaagcgccccccggcggtctgctg
ctccagtggctgtgtagtgaggcgtggtttttactcttgcacctgtgtcactgtgcgcgc
tcacactttgagctgcggcgcctcctgcaggtcttggctgacgtggacatgatgaacaag
gacaacggtccggacttccggaagctgagtcggctgagtgacctcctgcagggttcggga
gtggccgtgtctcccaggttgctgcaatgtaattcggcctccatccagcaggaggagttg
caggccaccgtcgacgctttgcaggcgagaggattctacgcacgagcacaaagcgtcgcc
acggtggcgcaacttcctgtacaacggctgctcatgtgtcagctggcccaggagctggcg
cttcagcgttccaagcgtcagtggtcccggccggagagtcgcgtgtgcttttggaggaag
tgccaccgccagctcgaggtcgagcgcgtggaccccgattcggcttcccgctttttcctg
tcccaggcggaccgcgcgctgtccgagtcgtcgacagcttcggactttcagtcggagctg
ctggcggtgcgggaaggctgcctgctgctcgccgcggccgcccgctggctgtcgctgcgc
cggccggttccggtggagcggatccaggacctcgagaagaggctctgggtgggccgcgta
cgacagcacaccctagtggccgccatccgcacggatagcgtcttcaacctccttccgcca
gatgtcaacgcgtacgaccttttcatgaaggacttttccttctgtgacattccggagcta
cgtacggacacgctcctcagcccggaaggacttcccggtccggccgaggaacacgtggac
gtggatccgctcttgcagccggcggagaagaagacactggcgctactgctggatgaggcg
ttggacgcgggaagcgtccacgaagtcagccgcgcctgccgatacttctcgctctaccat
cctgacctctggctgcttctgcgctgcagagccttggcgtccggagaactcggaccccag
acgctgcagacgcctctgacgccggatgatcccgaagtcccgcccaggagactccttcac
gcctcgccgtctgtgagcagcttgtcgtccttcgtgctgcttcctcctctccccgaagac
gacgtcgccgtccacttgcagaagatggccgagcagtgtcgccatggcaacaacgactgc
aaacaagtcctcagcctctaccagctctccaaggagctgcagtgttccttcagcgagctg
agcaacgaggatcccggccgcgttctggagaagcttctcctgcgcgatcatcccgaaggc
ttccggaacgctcaaatgttcatccgagctcagagtttctccgccgacgccgtggccgag
atggtggcggccgcgttggtgcgcgccaagcaggagcagcacgcccgccaaaccgagagg
caagcgttccgcccggcggaggctcgggactcgctggtccagctgattactctgtgcgag
gatccgaacctggtcggactcaaagtcctggaaaagctgaaaagcgtgccgctgcgggac
ctcggctgcattgtggagttgctgatcgcggcccacgactgcttcagcgtgacgtgtaac
atggaaggaatcgtcagagtcctgcaggccgccaggcacttaagccacgcctacttggcg
cccggcgagcactacggcctcttggtgcgcatgctgacgggaattggcagatacaacgag
atgacgtacgtattcgacctgttgcatcagaaccatcgctttgagatgctgctgaggaag
aagacggacatggacaggggacagagttccgggctgaagacggcgctgctggactacatc
aagcgatgcctgccggcggacagcgagaagcacaacatggtggcgctgtgcttcagcatg
aggcgcgagatcggcgagaaccacgagatggcggccaggacgcagctcaagatcatccag
tcgcaggcctgggcagtgtcgtcgccggagctcaaaagttctctgctcaaagttttgtcc
ctgctcaaggatgccgcagagagcttcaccaaggactcgtgcgtgcatcaggcgagtcgc
tgcgtgcgattggccaagctggtcacgcttcagctgcacttcctcaatcatggctccgcc
ctccgcttggtcaacctgcagcccgccgatatgatggacgccgccgcggcgctgcccagg
tgctaccaggtgttggtgctgtcggaggcgtacggctatagtccggactgggcggagctg
gtctaccagaagacggtcctcaacgccgactttgcctacctggatgagctgaggagactc
cgcccactgacctcgagcctctttgaggacatttttaagaagctggacggcgccccctgc
ggcgcgagcgcaaacgtgcgccgcctgctgacgtattgcgacgacatttacctgcgctac
cgcctggcgtaccagcgacagctggacgacgtcacgcaggcgctgctgcaggacgccgcc
gcctccagctacctcaacgacgccattggcgcccactga
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