Syngnathoides biaculeatus (alligator pipefish): 133497693
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Entry
133497693 CDS
T09681
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133497693 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133497693 (dmxl2)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133497693 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
133497693 (dmxl2)
RAVE complex
133497693 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
133497693
NCBI-ProteinID:
XP_061669776
LinkDB
All DBs
Position
3:5036057..5078230
Genome browser
AA seq
3096 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDVPFTAYGSGCDVVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLADALIEEEDGQATEDKPHPVLNDWSCVWQCKTAASVHIAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDPSDKKPSSVHFSFVYLAHPRSVTGIS
WRKTSKYMPKGSVSNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTHSFSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDPHTHRHIAHHANALCHF
HISASINPNTDIPSMLADSALFNADDGSGAGGFVVHWLNNKDLSFTCSMDLFMLQLRKFS
EQQLDHPTEDPLDPEGSPLKFDYDLDEMSEKASSELGEEGEPVEQGSTKASSPGSSSSLP
LPSMLLERKLEILITEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTERESSRAGEQGRMVQHVSHSASASTGLGWLALAPS
CNPNLGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHQFRYCGHRFHLNDQACH
TVLPLLLTSSHHNALLTPPSAPGSIDGEQPPTFPLPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPSLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GANTQLLHVFQEDFILGYKPQKEPDTHSTAFPSGEDYQPPPFSEKFFLVVIEKDLNRNSV
LQMWHLHLQSVQACVDDLNQNSGFQSKLMVPNQVVNADSSPETSPVRPLPRSASTVNLQS
ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WRCAVEGDHGDSDDDHDKRMYRWEPWALMNEEEDNNSAVFVSGRPVAVSCSYIGRLAVAF
KQSRHGQISGKEFSMHVSIYECESTGGSEWVLEQTLHLEEFNRPSSTLDPRVSVDSNLFV
YSRSDLYMSRDHNSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQTSSK
EGVAVITLPLGGSIKQGIRSRWILLRTIDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEM
HVYAQWHQDKKPGEGEEGDLSSADIDGASSSVFEGRARAKSVFEGSAAVDEALRAPAGLQ
EGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVRDVEAGE
GGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALMSADEDTTIFKGTD
EAVKGPKVANGDAGHMSTEDQYADLFQVPTVTTDDFVNFATDKPEKKSRVINLSQYGPAY
FGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVSSSTDQQYTGGEALDEC
GLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQRGDP
QWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRS
QHDEKMTQFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVLMEKM
EDLQLAMIVARLYEADFESSSTCQGLLYEKVLGCNRDGSRYHCSRLHPDPFLRSIAYWIM
KDYTQALDTLLERIPKDDDDNRDVMVKSCNPVVFSFYNYLRTHPLIIRRHFASSEGTAPT
VGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVSKKSGSSPLSKAS
SKANVNSTKPLEQSAGLDWASPAPPAWGVNESAGCMDWSQPVGKLEDDELKLDWGEDKED
DEDDDEDCLTMKKLEKEMKVEGTLESKMQRDGLQGEPEVDVIAEQLKFRACLKILMTELR
TLATGFEVDGGKLRFQLYSWLEKEIAAMHNICNYKVDGKEQESEADHWAERPASVDISDD
MLERMDACAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTS
VRMELLFLLQESQQEITVKQLQSPLPLPTTLPLLSACVAPTKTVIANPVLHLSNHIHDIL
HTITLMEAPPHPDVMDDRVTALHTLAASLSACIYQALCDSHSYSSQTEANQFTGMVYQGL
LLSERKRLRTESIEEHITPNSSPAQWPGVSSLISLLTSAREEDQPRLNVLLCEAVMAVYL
ALLIHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPDAPPVVPLQPAAEDG
DRYRRRFNMRMLVPGRPVKETPAAPPPVPTERPTYREKFIPPELSMWDYFVAKPFLPLSD
SNALCDSDESGAEDDDDDDDAFLSDTQMTEHSDPNSYSWALIRLVMVKLFHHSIKNFLPI
TGLDFADLPVTSPFTNAVLKTLENWEHILLETMNKFDGPPPNYINTYPTDLSAGGGPAIL
RHKAMLEPDNTPFKTKNHQSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSECVDNHVD
HVRQNFIAGASGLNKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVLASTHDVQE
VDVSTVVAVQPYTWIGEDFDKESRSSDDIDCRSSHTNIAQASSGPFAPPQLPVSASMPWL
GSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGN
ARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKTCGDFAFITSSSL
IATAGQSNDSRNVCLWDTLISPSNSMVHAFPCHENGATVLQYAPKQQLLITGGRKGFVCV
FDIRQRQLLHTFQAHDSAIKALALDVFEDFFVTGSAEGNMKVWKLAGHGLMHSFGSEHAK
QSIFRNIGAGVMQVEARPGNRIFTCGADGTLKMRVLPDRYNIPSGLVDILDVRSFKCIRL
GDVQHGLLYVSCALPCLFLLFIREKNRYLHSKLRRH
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaagtgttgacgggagccgtgaaccccggggattgctgctactccgtt
ggaagcgtgaatgacgttccgttcacggcctacggctcaggttgcgatgtggtgatctta
gctagtgacttcgagtgtgtgcagataatcccaggagctcagaatgggaacattcaagtg
ggctgcgtggagtgctcccatcagcttggcaggattgccgcctcctacggaaacacagtc
tgcatctttgaacctctctctaccaacccgaataaacgtcacaagcaacttaactatcag
tggcaaaagacagggcagttcttccttgatgccatcacctacaacctggcctgggaccca
caggggaaccgtatcctagcagcaaccgagcggctccagctgtgggccccgccgctggca
gacgcactaatcgaggaggaggatggccaggctactgaggacaagccccatcccgttctt
aatgactggagttgtgtctggcagtgcaagactgctgcatctgtgcatattgccaagtgg
tcccccgatggagagtacttcgcaacagttgggaaggatgactgtttgctcaaagtgtgg
tatcccaccacgggctggcgttctgcagtggtagtccaggacccctcagataaaaaaccc
tcctctgttcacttctcatttgtttacctcgcgcatccccgctcggtcacaggtatatcc
tggagaaagacaagcaagtacatgccaaagggttccgtgagcaatgttttgctgacatcc
tgtgaggatggggtgtgtaggctgtggtctgagaccctccttcctgaggacagcttgctt
ggggggcaaatatctgagaacacgcactcttttagctccagtttgccaggcttggcaggc
aataaggataaaatccagcatgctttggagtctattcaccacctgaagcatttgcgtcgg
ggaagacgacgatcatctgctttggtagctcacagtgagctgctcccctctcagcttggc
acacaggatccgcacactcaccgccacattgctcatcatgccaacgccttgtgtcacttc
cacatctcagccagtattaatcccaacacagacatcccatcaatgctggcagactctgca
ctcttcaacgcagatgatggcagcggggcgggaggatttgtggttcactggctcaataac
aaagacctaagcttcacctgctccatggatcttttcatgctacagctccgcaagttctct
gaacagcagctagaccatccaacagaagaccccctggaccctgaaggatcccctttgaag
ttcgactatgacctcgatgagatgtctgaaaaagcctcatctgagcttggagaggaaggt
gagccagtggagcagggaagcacgaaggcatcctcaccaggatccagctccagcttgcct
ttaccctcaatgctgctcgagagaaagctggagattttaatcacagagtggaataagagt
cctgacatgttgttcacaatccacccgactgatggctctttccttgtttggcatgtaaag
tacttggatgaattcaaccagggcatcttcagacaggttcaggtgtccttttcctcccgt
atcccagtggcatttccaacaggcgatgccaactctctaagtaaaaatatcctgatgtat
gcctgtacgctgactgagagggagagctccagggccggcgagcaggggaggatggttcag
catgtctcgcattctgcctcggcctcgacgggcctcggttggctcgccttggccccttct
tgtaaccccaatcttggcatcagtcctgctgtcatgatggtctcaaagcatgtagatgga
tcgcttaaccagtgggctgtgacgtttgccgagcgctcagcattctccaatgtcttgacc
gtgtcccaccaatttcgctattgtggccaccgtttccatttgaatgaccaagcctgtcac
acagtgctgcctctgctgctcacctcctcgcaccacaacgcacttcttacacctccttca
gctcctggcagcatagatggagaacaacctcctacctttccccttccaaagggacttcct
cggaagcagcttcgtaacgcagcaacaaggaccttccatgaccccaatgccatctacagt
gaactcattttgtggcgagtggatcacattggacccctctcatgcaccggaggggtttct
gaactggctcgaatcaattctctgcatacctctgctttcagcaatgttgcttggctacct
tcacttgtccccagctctgtactaggaacatactgtaatagtgccagtgcctgctttgtg
gcatcggatggtaagaaccttcgtctctatcaagctgtggtggacgccagaaagttacta
gatgaactgtcagatccagaaacatctaaactagttggcgaagtgtttaacattgtcagc
cagcaatccactgccagacctggctgtatcatagagctcgatgtcattacaaaccagtgt
ggtgccaatacccagctgctgcatgtcttccaagaggatttcattctaggatacaaacct
caaaaggaaccagacacacactcaactgcttttccatctggtgaagattaccaacctccc
cctttttctgagaagtttttcctggtggtgatcgaaaaggatctcaacaggaactctgtg
ctacaaatgtggcacttgcacctccaatctgtccaggcctgtgttgatgacttgaaccaa
aattctggcttccagagcaagttaatggttcccaatcaagttgtgaatgctgactcatct
ccggagacctcccctgtcaggcctcttccccgctcagcctccacggtcaacttgcagtca
gccagcaaactcatcctcagttccaaactggtgtacagcaagcgattagacttgccccat
ggggtagaagtgaccagagccacaccgtctgctggccatctcagttcgtcctctatctac
cctgtgtgcctggctccgtatctgattgtgactacctgctccgactctcgagtgcggttc
tggcgctgtgccgtcgagggtgaccatggagatagtgacgatgatcatgacaagcggatg
taccgctgggagccctgggctttaatgaacgaggaagaagacaacaacagcgcggtgttt
gtgtctgggaggcccgtcgctgtgtcgtgctcctacattggtaggctggctgtggctttt
aaacagtcacgtcatggacagatttctggaaaagagttctccatgcacgtgtctatatat
gagtgtgaatcaactggtggttccgagtgggttttggagcaaacactgcatttggaagag
tttaacagaccctcatcaaccttggacccgagagtcagtgtggactccaacctctttgtt
tacagcagatcggacctttacatgagcagagaccataactcaccaaatatcaagcattac
gtccacctggattggttgtcaaaagaagatggctctcatatcctgactgtgggggttggc
tccaacattctcatgtatggtcgaatttctggcatggtcaatgagcagacaagcagcaaa
gagggtgtggctgtcatcacccttcctctagggggcagtatcaaacaggggatccgctct
cgctggatcctactaaggaccatagacctcctgtcctctgtcgatggcacaccttctttg
ccagtctcactctcctgggtgagggatggcatcttggtagtgggcatggattgtgagatg
cacgtatatgcccaatggcaccaggacaagaagcctggtgagggagaagagggcgacctg
tcatctgcagacattgatggagcttcttcctcagtctttgaagggagagccagagctaag
agtgtgtttgaagggagcgccgcagtggatgaggcgctacgtgccccggcaggacttcaa
gagggtggactttttgaggcagctcactcactgtcgccgactctaccccagtatcacccc
acccagttgcttgagctcatggacttgggaaaggttcgtcgtgccaaggccatcctcgct
catttggtgaagtgtatcgctggcgaggtcgctgtagtgagggatgtggaggctggcgag
ggcggagccaggagacatctgtcccggaccatcagcgtgactggcagcacagcaaaagac
accatcgtggccggtcgtgacggagggcgagactacaccgaaatcaactccatccccccg
ctgcctctctatgcgctgatgtcggctgatgaagatacgacgatcttcaagggcacagac
gaagctgtcaaaggacccaaagtggccaatggcgatgcagggcacatgtctactgaagac
caatatgctgacctcttccaggtgcccacagtcaccacagatgactttgtgaactttgcc
actgacaaaccagagaagaagtctcgcgttatcaacctctcgcaatacggtcctgcatac
ttcggaccggaacatgcacaggtgttgtccagtcacctcatgcactccagcttgcctgga
ctaacccgacttgagcagatgttcttggtggccctggctgacacggtagcaaccacaagt
gccgaggtcagcagttccactgaccaacaatacacaggaggcgaagctctggatgagtgt
ggactgaggtacctgctggccatgcgtcttcatacatgcctgctcacctctctgccccca
ctttaccgcatgcagcttctccaccagggtctgtcgacatgccactttgcctgggccttt
cactctgaggcagaggaggagttgctgaatatgattccagccatgcagagaggtgaccca
cagtggtccgagctccgagcggttggtgtgggttggtggatacgtaacatcaacacctta
cggaaaatggtggaaaagctgggcaaagcagcattccagagacacaatgaccctttagat
gctgcactcttctacctggccatgaagaaaaaggctgttctgtggggactcttcaggtcc
cagcatgatgagaagatgactcagtttttcaagaataatttcacagaagatcgctggcga
aaggcagctctaaaaaatgccttctcgctgcttggaaagcaacgctttgaacagtcggcc
gccttcttcttgctggctggatcactcaaagatgcgatagaggttttgatggaaaagatg
gaggatctccagttagccatgatagtcgctaggctgtatgaagccgactttgagagctct
tccacctgccaaggcctcctttacgagaaggttcttggttgtaacagagacggaagtcgt
taccactgttcgagacttcaccctgacccgttcctgcgcagcatagcgtactggataatg
aaggattacacccaagctttggacacgctcttagagcgaatccccaaagatgatgatgat
aaccgtgatgtgatggtcaaatcttgcaaccccgtggtattcagtttctacaactatcta
agaacacacccactcatcatccgtcggcactttgcgagttcagagggcacagcccccact
gtgggtctcaccgcagaaaagagcagtgcagatgaaatcaacctgatagagcgcaagttg
ttcttcaccacagcaaatgcacacttcaaggttggctgtccagttctggccctggaggtt
ctctccaaaatccccaaagttagcaagaaatcaggctcatctccccttagcaaggcgtca
tccaaagccaatgtaaactcaaccaagccattggaacagagcgcaggtctggactgggct
tcccctgcaccccctgcatggggagtaaatgaaagtgccggctgcatggactggagccaa
cccgtgggaaagttggaggacgatgagctcaagcttgactggggggaggacaaggaagat
gatgaagatgacgatgaggattgtctgactatgaaaaaacttgaaaaggagatgaaagtg
gaaggaactttggaatctaagatgcagagagatggattgcagggtgagcctgaggtggat
gtgatagcggagcagctgaagttccgcgcctgtctaaaaattctaatgacagagctgcga
acactagccacaggcttcgaagtagatggaggcaaacttcgttttcagctttacagctgg
ctggagaaggagattgcagcgatgcataacatctgcaactacaaggtagatgggaaagag
caagagtctgaggccgaccactgggcagaacgaccagcatcagtggatatatctgacgac
atgttggaaagaatggatgcttgtgcttatgagcgtcatcaaatggagcgccggcgtctt
caggctaagcagcagcattcagagaggcgcaaggcttggctgaggaagaatcaggctctg
cttcgggtcttcctttcttactgcagcctccatggagccaagggaggaggagtcacctct
gtgcgcatggagcttctattccttctgcaggagagccaacaggagatcacagtgaagcag
ctgcaatcccccctccctctaccaactaccttgcctctgctctcggcctgcgttgccccc
accaaaacggtcatagccaatcccgtgcttcatctcagcaaccacattcacgacatcctc
cacaccatcaccctcatggaggctccgccgcatccagatgtcatggatgatcgggtaact
gcgctgcacacattggcagcatcattgtctgcttgcatctatcaggcactatgtgacagt
catagttacagcagccagacagaggccaaccaatttactggaatggtttaccagggcttg
ttgctcagcgagaggaaacgactccgcactgaaagcatcgaggaacatatcactcccaac
tcttctcctgctcagtggccaggtgtgtcgtccctgatttctctgttgacgtctgcccgg
gaggaggaccagccaagactcaacgtgctgctgtgtgaggcagtcatggcggtttatctc
gccttgcttatccatggtttgggcactcataacagcaacgaactcttccgcctcgccgca
catcctctcaacaaccgcatgtgggccgctgtctttggaggaggagccaaagtcataatt
aagccaaagaggcctgatgctccaccagtggtgccccttcagcccgctgctgaggatggg
gaccgatacaggcgcagatttaacatgaggatgctggtacccggacgtcctgtgaaggag
acgccagccgccccaccgccggttcccacagagagacccacttacagggagaaatttatt
cctccagagctgagcatgtgggactattttgtggccaaacccttcctgccgttgtctgac
agcaatgctttgtgtgattcggatgaaagtggagcagaggatgacgacgatgatgatgac
gctttcctttcggatacgcagatgacagagcattctgaccccaactcctacagctgggct
ctgatccgtttggtcatggtgaaactgtttcaccacagcattaaaaacttcctcccgatc
actggccttgattttgcagacttgcccgtcacgtcgcctttcacaaacgctgtattgaag
actcttgaaaactgggaacatattttattggagaccatgaataaatttgatggtccgccc
cccaattacattaacacttacccgactgacctaagcgccggaggcggtcctgccatactg
cgacacaaggccatgttggagcctgacaacactcctttcaagactaaaaatcaccagtcc
tttcctgcccgacgcctgtggcatttcctggtcaaacaggaagttcttcaggagacctta
attcgttacatctttaccaagaaaaggaagcaaagcgagtgcgtagacaaccatgtggac
catgtaaggcaaaacttcatagccggagctagcggtctcaacaaggtggaggctgatctt
ggctatccaggaggcaaggcaaaaatcattcacaaagagtcggacatcataatggccttt
gcaatcaacaaggctaactctaatgaaatagtgctggcctccacccatgatgtccaggaa
gtggacgtgtctacggtagtagctgttcaaccttacacctggattggagaggactttgat
aaggagtcacgcagttctgatgacatcgactgccgatcatctcacaccaacattgcccag
gccagctctggtccttttgcacccccgcagttaccggtctctgcatccatgccatggcta
ggcagtgggcagaccagcatgggagccagcgtgatcatgaagaggaatctgaataatgtc
aagagaatgacgtcccaccccatatatcagtattacatgacgggggcccaggatggcagc
gtgaggatgttcgaatggaacagacctcagcagctcatctgcttcagacaagcgggcaac
gctcgagtcacccggctctatttcaactcccagggcaacaagtgcggagtcgctgacggg
gagggatttctcagtctgtggcaagtcaatcagacctcctccaacccgaaaccctacctg
agttggcagtgccacacaaagacttgcggagattttgcttttattacatcatccagcctc
atcgcgacagccggacagtccaacgatagcagaaacgtgtgcctgtgggacaccctaatt
tcacccagcaatagcatggttcacgccttcccgtgccacgagaacggggccaccgtgctg
cagtacgctcccaaacagcagctgctgatcaccggaggcagaaagggcttcgtgtgcgtg
ttcgacatccgccagcggcagctgctccacactttccaagcgcacgactccgccatcaag
gcgctggccttggacgtcttcgaggacttctttgtcaccggctctgctgagggcaacatg
aaggtttggaagctcgctggccacgggctcatgcactcattcggcagcgagcacgccaag
cagtccatcttccgcaacatcggcgccggcgtcatgcaggtggaagcgcgtcccggcaac
cgcatcttcacttgcggggcggacggcaccctgaagatgagggtcctccccgaccgctac
aacatccccagcggcttggtcgacatcctggatgtgaggagttttaaatgtatccgattg
ggagacgtgcaacacggtctgttgtatgtaagttgtgcgttaccttgtttgtttttactg
ttcattcgtgaaaaaaatagatatttgcactcgaaactacggagacactaa
DBGET
integrated database retrieval system
