Syngnathoides biaculeatus (alligator pipefish): 133497777
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Entry
133497777 CDS
T09681
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133497777 (lingo1b)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133497777 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_R13L1-DRL21
LRR_9
LRR_Zer-1
LRR_RPS2
V-set
LRRNT
Ig_C17orf99
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
133497777
NCBI-ProteinID:
XP_061669927
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All DBs
Position
3:complement(28818479..28842336)
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AA seq
623 aa
AA seq
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MTVLVHSRMVSAEAGGHSYLVACWQPILVLMLGTVLSGSTTGCPSRCDCNAQERSVVCHR
RRLATFPEGIPTETKLLDLSKNRVKLLGPEEFINYPQLEELQLNENIISSIESGAFSNLM
NLRNLGLRNNQLKLIQLGVFTGLNNLTHLDISENKIVILLDYMFQELYNLRVLEVGDNDL
VFISPRSFHGLSNLETLNIEGYKLSSVPTDALSHLHNLLSLRLRYLNITAIRDYSFKRLY
RLRALEISQMPSLDTMTPKCLFGMNLTSLAITNCNFTAIPYKAISHLSYLRFLNMSFNPI
LTVEGNQLHNLQKLQVFHLAGGRLITIEPYSFRGLNHMHILNVSSNRLSTLEESVFHSVG
NLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPICASPDVVQGKEFKDFPDILPSDYF
ICHKSKIVDNKVQESHVDEGTTVSFTCQAEGEPAPVIMWLSPKKDYITTKTVGTRLSVSD
DGELEVRYAQIQDNGTYLCIASNAAGNDTKVAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRTTIPFPFDVKTLMIATTMGFISFLGVVLFCLVILFLWSRGKNNTKPSIEVEYV
PRKEETEEASPAETPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggttcacagtaggatggtctctgctgaggcagggggccacagctaccta
gtggcatgttggcagcccatcctagtcctgatgctgggcaccgtcctctctggctcaacc
actggatgcccctcccgatgtgactgcaatgcccaagagcgctcggtcgtgtgccatcga
agacgattggctacttttcctgagggcattcccactgaaacaaagctcctggatctgagc
aagaatcgtgtaaaacttcttgggccagaggaatttatcaactacccacagctggaagag
ctgcagctaaatgaaaacatcatttcctctattgagtcaggggcttttagcaacctcatg
aatctacggaatctcgggttgcgcaacaaccagttgaagctcattcagcttggggtgttc
acaggccttaataaccttacgcatctggatattagtgagaataaaattgtcattctgctg
gactacatgttccaggagctctacaacttgagggtactggaagtcggtgacaatgacctc
gttttcatttcaccacgatcgtttcatggcctcagcaatcttgaaaccctcaacattgag
ggttacaagctgtcttcagtgcctactgatgccctgagccatctgcacaacctcctgtca
ctgcgattacggtatctaaacatcactgccattagggattactcatttaagcgtctgtat
aggctccgagctctagaaatatcacagatgccttccctggataccatgaccccaaaatgc
ttgttcggaatgaatttaacatctttagcaataactaattgtaattttactgccatccct
tacaaggctatcagtcatctaagttatttacgatttctaaacatgtcttttaatcccatt
cttactgttgaagggaaccaacttcacaatctacagaagctccaggtttttcatttggct
ggtggaagattaattaccattgagccttactcttttcgtggactaaatcatatgcacatt
cttaacgtttctagtaatagattgagcaccttggaggagtctgtcttccactcagtgggt
aatttggaaactctggctttgcatgacaaccctttggcctgcgactgtcgcttgctctgg
gtttttcggcgacggtggagattgaactttaatagacagcagcccatctgtgcatcacct
gatgttgtgcagggaaaggagttcaaggacttcccagatatccttccttctgattatttc
atctgccataaatctaagattgtggataacaaggttcaagagagccatgtggatgaagga
actacagtcagttttacttgccaagctgagggtgagccagcccctgtaatcatgtggctt
tctcctaagaaagactacatcaccaccaaaactgtggggacaaggctttctgtgtccgat
gatggcgaactagaggttcgttatgcccaaatccaagacaatgggacctacttgtgcatt
gcaagcaatgcagcaggcaatgacacaaaagttgctcatctctttgtgcacagctactcc
cctaattggccccatcaacccaacaagacatttgccttcatttccaaccaacccagcgat
gaaggagccaatgtgacccggaccacaattccatttccgttcgatgtaaagaccctaatg
attgctaccacaatggggttcatctcattccttggtgtagtactcttttgtcttgtaatt
cttttcctctggagcagagggaaaaacaacacaaaaccaagtatagaggttgagtatgtg
ccacgcaaagaagaaacagaagaggctagtccagcagagacacccatacagttcaacatg
aaaatcatgtga
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