Syngnathoides biaculeatus (alligator pipefish): 133497795
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Entry
133497795 CDS
T09681
Name
(RefSeq) polycystin-1-like protein 2 isoform X1
KO
K04988
polycystin 1L2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133497795
04091 Lectins [BR:
sbia04091
]
133497795
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133497795
Lectins [BR:
sbia04091
]
C-Type lectins
Others
133497795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
REJ
Ion_trans
GPS
PKD
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
133497795
NCBI-ProteinID:
XP_061669952
LinkDB
All DBs
Position
3:7109491..7167082
Genome browser
AA seq
2487 aa
AA seq
DB search
MDRITFGVLTLFFLFLSLTRFVAGDPDALSCPEYQEGFDGSCYEFVGLQRPFLGAQKWCE
RGGGHLAFILNDETQNFLQRHLDPKKNWWLGLAPAAPNLTLETAAAGVSLAWLDGSDVRY
DNWANKPDAQATCGYILKKSGFLWEASENCTQELNFICQFDSRSSIACDGQNATLQCGSG
QVIEIDDGFYGRKTVHYCSTKLTSTPALPQDECTWTDVAASVKGSCHGLQACQAPADAKT
YGEPCPLLGSYLSVEYRCKDGLHLLMNKTAAVLENVTINIKWLLQPYEGNLTCALNAGDG
HTVDAITPEETESSVTHKFERPGLFVVTVECSTSDWHVTAQKAVSILEPVGQFGDIKCHS
TNASEGGANCTLLYNGGPVEVQVTVETGTNVTYTLQYEDLLLANTSADQGITPHNVTLNS
SAVEQLGRGCRNVTLNASNEVTTPAVSARFELCLLEPLEGLRASVMAEDGRCPDSGDLTV
GVWLERGAPVRLLFTLSVNNVTRLETRDMVNGSFQTYTFGSPLEDLFELNVQAVNAFSTS
DVNVSLENVFLACSNYSDTENMTPGESYDLKVISTPEFVIDYTRNVTLSIHGNVSLPSER
LKYQWKCRGDCKCSNQTNDETHVIDKDCLPNPFEMAVYTVSVRKTAWFRKWVRLASASKC
VAVVLEELKNVTISCDKCTSINVSNPIKLRLNCVATCPDVDWYTEDSKPLRDDLENCYSQ
EGRRPLMKKQQGNSEFLVNARQLKQSRDNLRNITVIVQGKSELGYAKYTLPIPDPEPTEA
PPDVVPPTCRIFPLSGTVLDSFDISCQASSFCSSGCQYCFKTGTGKHLRCTNKELVKSIL
LPVGDEKNNYNLSIVVTVKNEYTEVSTTVHTQVRNNNSSASVETLQSVLDDTVSQLEEDG
LLSGEALGQIVTSVADILNTETDEDQKDARKKLREQMLTKMTTVLLDSPSNTSQEVQVTA
RAVAGLTQRSDELSPAAQEEASSLLVDLSSSLNTISVHQDGSSDNGEVVDGASPIVEAAS
NILNASSNEKVSNSLLTGINNVQNALLNHKKLNGDPIIIDSDQISVYVNRLSPENMQIQD
INIERTSASRFSFPTLPSDIFLPDEPVDVRMMSFEKNPYSWKGGNISGAVGSVSLTRTNG
TVIPVKNLPEEIEIILPRLDIGQENSTVLDLANFSTLMIDVPSPDVTLVLKMDPSENITF
VVLLGYKNYPTIEDYVAKTQMPLENVKEDEKYTWVLTPKERGAEAGVHFLVLKPKVEPGV
KSVNATVSIVTIAAQCKYWDEEDSSWSEQGCRVGPLTTPLLTQCLCNHLTFFGSSFFVMP
NVVDVTRTAELFATFFNNPVVVCFVGAIFCAYLLVVVWARRKDIQDSAKVKITLLEDNDP
LAEYCYMLTIGTGHRHGASTSSQVTLTLLGTEGESEPHHLSDREKPLFERGGEDMFLLTT
HFSLGELRSIRLWHDNSGTHPAWYVNKVMVQDLETGQKWHFLCNSWLAVDVGECTLDKVF
PVATEEDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRVSCCFSLLLCTMLT
SIMFWGIPSDPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPREKAQK
SEKTKQGKTVRVSPSQTSSPQKEQKDITPDTVLKDIKRIAQSLSKAMKSPLPHLAIRPGQ
QTDINTLLSLVEDIIRQQNQTSSDFYTDTAKRERSILSLGAVDLQEKSVWGSPEKTSDGV
QKKSSNNSRYLYRQLRHVEKKLGFLGSSRFSNPDIYNKAMQQVQGMKNLLEFHLPSHSLD
GEQSERSPSPEDGVHKGLAKKCCQTGLPWWFVFVGWILVIATSGVSGYFTMMYGLTYGKD
RSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGEPQIDESLKNSDDPD
GVRAARRDSTCSFYQPPPPTDIEKMRSNMIKEQKVVALIREILAYMGFMWMLLLVAYGQR
DPNAYFLTQHIRQSFSKGISDTMSIQDVFTWANTTLLSNLFGEHPGFITDGNSKLVGNAR
LRQLRVQKNSCHVARRMQQALRDCHALYSWDSEDMGSYGPGWNHSEAHNTSQNLPGPWKY
QSQGKLRAYPVWGSMMLYRGGGFVVDLGPSLENSSRSLQYLYENRWFDAYTQAIFVEFTV
YNANVNLFCIVTLMLETTAIGAFQFRSELQNVRLYQSTGGLHIFVMASEAIYFLFILYYM
CVQAKLIKQQRWSYFKSKLNLLELAIILLSWSALSIFIKRTLLGKRDMEYYQNHKDQYAS
FHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITATLQRAWTDISGFLVVMTIM
FLAYSIASNLMYGWKLYSYHTLFNAAQTMVSLQLGIFNYDEILNYNPVLGAFLIGSCIVF
MTFVVLNLFISVILVAFSQEQIHHKPSEEEEIVDLMMMKLCSLFGMKSKSKQGDDGATEK
NGLSSASDNGISTITPGCLDKDSYVQL
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtatcacttttggtgtcctgactttattttttctctttctcagcttgacccgt
ttcgttgcaggagaccccgatgctctttcctgccctgaataccaggagggcttcgatggc
tcctgctacgagtttgtgggtctgcagcggcccttcctcggcgcccagaagtggtgtgag
agaggaggaggacacctggccttcatcctgaatgacgagacacagaacttccttcagagg
cacctcgatccaaagaaaaactggtggctcgggctggcgcctgctgcaccgaacctcact
ctggaaactgctgccgccggggtttctttggcctggctggatggctcagatgtcagatac
gataattgggcgaacaagcccgatgcgcaagcgacctgcggatatattctaaaaaagtca
ggcttcctgtgggaagcgtcagaaaactgtacccaggaacttaacttcatctgccagttt
gattctaggagctctattgcctgtgatggccagaacgccacgttgcagtgcggctcaggt
caagtcatagaaatagacgacggtttctacggtcgaaaaactgttcactactgctcgacc
aaactcaccagcacgcccgcgcttcctcaggatgagtgcacctggacagatgtcgccgcc
tctgtgaaaggcagttgccatggactccaggcctgccaagctccggcagacgccaagacc
tacggtgaaccttgtcccctgttaggaagttacttgtctgtggaataccgctgtaaagac
ggactccacttgctgatgaacaagacggcggcggtgttggagaatgttacgatcaatatc
aagtggctcctgcaaccttatgagggaaaccttacctgtgctctgaatgctggagatggc
cacacggttgatgccatcaccccagaagagacggagagctcggtcacgcacaaattcgaa
aggcctggacttttcgtggtcacggtggagtgttccaccagcgattggcacgtgacggct
caaaaagccgtcagcattctggagccggtgggccagtttggagacatcaagtgccatagc
accaacgcgtcagagggcggcgctaactgcaccctgctttacaatggcgggcctgttgaa
gttcaggtcacagtggaaacaggcacaaatgttacctacacccttcaatacgaggacctt
ttactcgcaaacacatcagctgatcaagggatcacgccgcacaacgttacattgaactca
agtgccgtggagcagcttgggcgcggttgtcgcaacgtgactttaaacgcctccaacgag
gtcacgaccccagcggtgtccgcccggttcgagctgtgccttctggagcctcttgagggc
ctgcgagcctctgtgatggcagaggatggccggtgtcccgactccggcgacctcaccgtc
ggcgtttggctggagcgcggcgcccccgtgcggctcctctttaccctgagtgtcaacaac
gttactcgcctcgagaccagagacatggtcaacggaagcttccaaacgtacacctttgga
agcccacttgaagatttgtttgaattgaatgtgcaagccgtgaatgctttctcaacatct
gacgtcaacgtgagcctggaaaacgtattcctggcatgcagtaactactccgatactgaa
aacatgactcccggtgaatcttacgacttgaaagtcatttccactcccgaatttgtgatt
gactacactcgcaatgtcaccctcagcattcatggaaatgtgtcattacccagcgaacga
ctcaaatatcaatggaaatgtagaggggactgcaaatgcagcaatcaaacaaatgacgaa
acacacgtgattgacaaagattgtcttccgaatccattcgagatggccgtctacactgtg
agtgtgaggaaaacggcctggtttagaaaatgggtacggctagcgtccgcttctaaatgc
gttgctgttgttctggaggaattgaaaaatgtcaccatcagttgcgataaatgcacttcc
attaatgtgagcaaccctataaagctgagactgaactgcgtggccacctgcccagatgtc
gactggtacacggaggattcaaaaccactgagggatgatcttgaaaactgttactcacaa
gaaggaagaaggccgctgatgaagaagcaacagggcaactcggagtttcttgtaaacgcc
cgacagctgaaacagtcaagggacaatttgcggaacatcaccgtgattgttcaaggtaaa
tcggagctcggctatgccaagtacacactccccataccggatccggagccaactgaagcc
ccaccagacgtcgttcccccaacgtgcaggatctttccgctgtcgggcactgtgcttgac
tcatttgatatcagctgccaagctagttctttctgctcttcgggctgtcagtattgcttc
aagacaggcacaggcaaacatctacgttgcactaataaagaattggtgaaatctattcta
ttgcccgttggagacgagaagaacaattacaatttgtctatcgtggtgactgtgaaaaat
gaatatacagaagttagtacaacggtccacactcaggttcgtaacaacaactccagcgct
tccgtggagaccctgcagtcagttttagacgataccgtctcgcagttagaggaggacggt
cttctctctggagaggccctcggccaaatcgtcacctccgtagccgacattctcaacacc
gagactgacgaggatcagaaggatgcaaggaagaagcttagagagcaaatgctgacaaaa
atgactacagtgctgctggactctccgtcaaacaccagtcaggaggtacaagtgacagcc
agagctgtggctggactcacacagcgctcagatgagctcagtcccgctgcccaggaagaa
gcaagttcattgttggttgacctaagctcgtccctcaacactataagtgttcatcaggat
ggtagtagtgacaacggagaagttgtggacggagcttcaccgatagttgaagccgccagt
aatatattgaacgcttcgtcaaatgaaaaagtttccaactcccttctgaccggaataaac
aatgtacagaatgccttgttgaatcataaaaagttgaacggcgatcccatcattattgac
tctgatcagatcagcgtgtatgtcaacagactatctccagaaaacatgcaaatacaggat
ataaacatcgaaaggaccagcgcttcgagattttcttttccaactctgccttctgatatt
ttcttaccagatgagcctgtggatgtcagaatgatgagttttgaaaagaacccatattcg
tggaaaggtggcaacatttcgggagctgtgggatctgtgtcgctcacaagaacaaacggc
actgtcatccctgttaagaatttgcccgaggagattgagattatcctccccaggctggat
attggacaggagaacagtaccgttctggacctggccaattttagcacgttaatgattgat
gttccttcacctgacgttacactggttctgaaaatggatccgtctgaaaacattacattc
gtggtactcctgggttacaagaattatccaacaattgaggattacgtggccaaaactcag
atgcctcttgagaatgtgaaagaagacgaaaaatatacctgggtcctcactcctaaagaa
agaggagcagaagctggcgttcactttctcgtcctgaagcccaaagtcgaaccaggtgtc
aaatctgttaacgccacagtcagtattgtaaccattgcggcccagtgcaagtactgggat
gaagaagattcgtcttggagtgaacagggctgcagggtgggcccactcaccacccctttg
ctcactcagtgtctgtgcaaccacttaactttctttggcagctctttctttgtcatgcca
aacgtcgtggatgtgacacgcaccgcagagctttttgccactttctttaataatcccgtg
gttgtgtgcttcgtgggggccattttctgtgcttatcttctggtggttgtatgggcgcgc
agaaaagacatccaggactcagctaaggtcaaaataaccctgcttgaagataatgaccca
ctggcagagtactgctacatgctgacaatcggcaccgggcatcgccatggtgcatccacc
tcctcacaggtgacgctgacgctgctggggacagaaggagaaagtgaaccccaccacctg
agtgatcgagaaaaacctctgtttgaaaggggcggggaagatatgtttctcttgaccaca
cacttttcccttggagagctgcggagcattaggctgtggcacgacaactcgggcacacac
cctgcatggtatgtcaataaagtaatggtgcaagatctggagactggtcagaagtggcat
tttctctgcaattcctggcttgctgtcgacgtgggggagtgcactctcgacaaggtcttc
ccagtggccactgaagaggatctgaagagatttagcaatctgttcttcatgaagacagct
aaggatttccgtgacggacacatctggttctcggtcatcagtcgacctccatgcagcacc
ttcactcgtgtacagcgagtgtcctgctgcttttccttgttgctctgcactatgttgacc
agcatcatgttttggggcatcccttcggatccctcagaacagaccatggacctgggtcac
atcgaattcacctggcaacaggtcatgattggtattcaaagttcgatcatcatgtttccc
atcaatctcctcattgtgagcatcttcagaaacacccgtcctcgggaaaaagctcagaaa
tctgaaaagaccaagcaggggaagacagttcgagtatctccctcgcaaacctcttccccc
cagaaggagcagaaggacatcacgccagacacagtgctgaaggacataaaaaggatagcc
cagtcactatcaaaggccatgaagagtcccctccctcatttggccattcgacctggtcaa
cagaccgatatcaacactcttttgtctctggtggaagacatcataaggcagcaaaaccaa
acctcctctgacttctacactgatactgccaaaagagaacgctcaatcctcagtctaggg
gcagtcgatcttcaagaaaagagtgtttggggcagtccagagaagacctcggatggggtt
cagaagaagagcagcaacaacagcaggtatttgtacaggcagctgcgtcatgtcgagaag
aagctgggttttctgggatcgtctcgattttcaaacccagacatctacaacaaagccatg
cagcaagttcaggggatgaagaacctgctcgagtttcacctgccgtcacacagcctagac
ggagaacagtcagagcgtagtcccagtccagaagacggcgtccacaagggccttgccaag
aaatgttgccaaactgggctgccatggtggtttgtcttcgttggctggatattggtgata
gcaaccagcggtgtgtccggatactttaccatgatgtatgggctaacctacgggaaagat
cgttctataagctggttgatctccatggtggtgtccttctttgaaagtttgttcatcaca
caaccgcttaaggttcttggcttcgctgctttcttcgcccttgttctgaaaaaggtagat
caggaggaatacggagagcctcagatcgacgagagcctcaagaattctgatgatccagac
ggggtgcgagcagcacggagagacagcacgtgcagtttctaccagccaccgcctccaaca
gacattgagaaaatgagaagcaacatgattaaagagcagaaagttgttgctctcattcgg
gagattcttgcctacatggggtttatgtggatgctgctcctggtggcatatggtcagagg
gatcccaatgcctatttcctgacccagcatatccgacagagctttagcaaaggcatctcc
gacacgatgagtattcaagacgtgttcacctgggcaaacacaaccctgctgagcaacttg
tttggagaacatccaggcttcatcacagacggaaactcaaagctggtggggaacgctcgt
ctgcgccagctgagggtacagaaaaactcgtgtcacgtggcacgtcgcatgcaacaagcc
ctgcgtgactgccatgcgctgtactcatgggactcagaggacatgggctcctacggtcca
ggctggaatcactctgaggcccataatacatcgcagaaccttcccggtccctggaagtac
cagtcccagggaaaactgagggcataccccgtctggggaagcatgatgctctacaggggc
ggaggcttcgtggtggatcttggaccaagtttagaaaactccagcagatcgctccagtac
ctttacgaaaaccgttggtttgatgcctacacccaagcaatatttgttgaattcaccgtg
tacaacgccaacgtcaacctcttctgcattgtcacactcatgctggagaccacagccata
ggggcttttcagttccggagcgagctccaaaatgttcgtctgtaccaatcgactgggggc
ctgcacatctttgtcatggcctctgaagcaatctacttcctcttcattctttattatatg
tgtgttcaagcgaagctcataaagcaacagagatggtcttatttcaagagtaaattgaat
ctgctcgagctggcaatcatccttctcagttggagcgccctctccatctttatcaagagg
actctgctggggaagcgtgacatggagtactaccagaaccacaaagaccagtacgccagt
tttcatgagacggccaaggctgatgcagtgctgggctatctgatcgccttcctggtgctg
ttggccacggtgaaactgtggcacctgctgagactcaaccccaagctgcacatgatcaca
gcaacactccagcgggcctggactgatatctcgggcttcctggtggtcatgaccatcatg
tttctggcctactccatcgcctctaacctgatgtacgggtggaagctgtattcctaccac
actctatttaacgctgcccagaccatggtcagcctgcagctgggaatctttaactacgac
gagattctcaattacaaccccgtcctgggcgccttccttatcggctcctgcatcgtgttt
atgacgtttgtggtgctcaatctcttcatttctgtcatccttgtggccttcagtcaagag
cagatacatcacaagccatccgaggaggaagagatagtggacctgatgatgatgaaactt
tgtagtctgtttggaatgaaatctaagagcaagcaaggggacgacggcgcgaccgagaag
aacggactttcgtctgcttccgataacggaatctctacaattacgccgggttgtcttgat
aaggactcgtatgttcaactttag
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integrated database retrieval system
