Syngnathoides biaculeatus (alligator pipefish): 133497826
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Entry
133497826 CDS
T09681
Symbol
irx3a
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133497826 (irx3a)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133497826 (irx3a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
DUF5662
Motif
Other DBs
NCBI-GeneID:
133497826
NCBI-ProteinID:
XP_061669997
LinkDB
All DBs
Position
3:18009938..18013272
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AA seq
438 aa
AA seq
DB search
MSFPQLGYQYIRPVYPPERQGMAGNPRSAAAAAAAAAAAADLSPSGTLSNVLSSVYGAPF
AAAAAAAAAQGYGAFLPYSNDISIFNQLGAQYELKDGPGVQHAGFPHHHPAFYPYGQYQF
GDPSRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
KKENKMTWAPRNRTDEEGNVYPSDHEGEEGDKREDEEEIDLENIDTENIESKDDLDEQDD
LHSELKLDTRSDSEGSEGYEDLPEQRFLKAGLHHHHHHHHHHLQIHHRGSSPLELKVDGD
KLNSGPVSSPPSENSQAPAQKPKXWSLAETAAAPDNPRKSPHVTAAPGAPHQQHGLMAPH
RLIASCPAVGKIQTWTNRGFSAHHLALLNSNHYLGLANQAGGGLPLYGGGRHTEDSKAAG
AGPGAGADSALTGTGPRH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctaccagtacatccggcccgtgtaccctccggagcgccag
ggcatggccggcaatccccggagcgccgccgccgccgcagcagccgccgcggccgccgcc
gacctcagtccgtcggggacgctctccaacgtgctgtcgtccgtgtacggagcgcccttc
gccgccgccgccgcggccgccgccgcgcagggctacggagccttcttgccctactccaac
gacatctccattttcaaccagctgggcgcccagtacgaactgaaggacggacccggggtc
cagcacgccggcttcccgcaccaccacccggccttctacccctacggccagtaccagttc
ggcgacccgtcccggcccaagaacgccacgcgggagagcaccagcaccctgaaggcctgg
ctcagcgagcaccgcaagaacccgtacccgaccaagggcgagaagatcatgctggccatc
atcaccaagatgaccctcactcaggtctccacgtggttcgccaacgcccgaaggaggctc
aagaaggaaaacaagatgacttgggcgcctcggaaccgaaccgacgaggagggcaacgtc
tatcccagcgaccacgagggcgaggagggcgacaaacgggaggatgaggaggagatcgac
ctcgagaacatcgacacggagaacattgagagcaaggacgacctggacgagcaggacgac
ctgcattcggaactcaaactcgacacgaggagcgactcggagggttcggagggttatgag
gatttacccgagcagaggtttctcaaagcgggcctgcaccaccaccatcaccaccaccac
caccacctgcagatccaccaccgcggctcctccccgctggagctcaaagttgacggggac
aaactgaactcgggtccggtcagctccccgccttctgagaacagtcaagctccggcccag
aaaccaaaantctggtcgctggcggagacggccgcggccccggacaacccgcgcaagtct
ccgcacgtgactgccgcccccggtgcgccccaccagcagcacggcctcatggccccgcac
agactcatcgcgtcgtgtcccgcagtggggaaaatccagacgtggacgaaccgaggcttc
tcggcgcaccacctggccctgctcaactccaaccactacctgggcctggccaaccaggcc
gggggcggccttccgctctatggaggcggccggcacacagaggacagcaaggcggccggg
gctgggcccggggccggggccgactctgcgctcacaggtaccggtccgcgacactga
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