Syngnathoides biaculeatus (alligator pipefish): 133497832
Help
Entry
133497832 CDS
T09681
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133497832 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133497832 (cngb1a)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133497832 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
PAZ_4
Motif
Other DBs
NCBI-GeneID:
133497832
NCBI-ProteinID:
XP_061670006
LinkDB
All DBs
Position
3:541094..563813
Genome browser
AA seq
963 aa
AA seq
DB search
MMSWLLQIVPQPPGTKQLHQPDPQTGQEVTIQEQSKQEAASSASSKGKDAADRMSPGLDK
VFPPAVVSRNDRQAAAEDAAPAAAVQKKKERERQPAAGDGLETGRDEEVGDVSWIPLLEN
IKKDAGEAVLAEVEKRLGRRRLEAARLAEEAAGKAAQEALRQLEAEHSAAIVIRCLPEAN
EQLPNILEEENEDEPGCLPEGGTQSSVGPGEVNALSETKDPLRSSGQVEAGAEATDEGLR
LEAGKGVIPPEIFTPPSRIPMLSVADAALSKHSWTADLSADGDDQESVRGELKSWSSQSD
LLTADVRPASAASVGSVVVQDRLGQLVRLFKGRTERYKDRLLDPDESEEESPATSPSKAL
PPPPPPPPGEEDELDHPTSRKEKEEEEEDEAALHFQLLRHAVKILKFPGMPKWLQAIVEF
RFPSSIDPFTDLVYVVWLFLVVAAWNWNVWLIPIRWAFPYQSPENLNLWLLADYTCDLIY
IMDILVFQPRLQFVSGGDIVCDKKAMRENYMTTERFKMDVISLFPMEIFYYWTGVNSLLR
FPRLLKYHVFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTK
WVYDGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMRDV
VGAATAGENYYRACMDSTTKYMNSYNIPNPVQNRIKTWYDYTWKSQGMLDEQELLVQLPA
KMRLDMAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMYII
KQGEVQVVGGPDLKTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDL
AEILVHYPESQKLLRKKAKTMLTKDKKPDEKGGSKDVAQVIPVRADTPKMFNVALRVTTE
AATAGASAKVQKSYGRPQDQAPLSPRRRGSSVVTVTSSKEGEALLSVDADSGAEKKKLQE
DAE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctggctgctccaaattgttcctcaaccccccgggacaaagcaactccaccag
cccgacccccaaacggggcaggaggtaacaatccaggagcagtccaaacaggaagcggcg
tcatcggcgagcagcaaggggaaggatgcggcggaccggatgagcccaggtctggacaaa
gtcttccctccggccgtcgtcagcaggaacgaccgtcaggccgccgccgaggatgctgcg
ccggcggcagccgttcagaagaagaaggagcgggaacggcagccggcagcaggtgacggc
ctcgagaccgggcgcgacgaggaggtcggagatgtgagttggattccgctgctcgagaat
atcaagaaggatgccggcgaggcggttctggctgaagtggagaaaagactcgggcggcgg
cgtctggaggccgcccgcctggccgaggaggccgccgggaaggcggcgcaggaagccctc
cgacagctggaggcggaacactcggccgcgatcgtcatccgatgtctgcccgaggccaac
gagcaacttcctaacatcctggaggaggaaaatgaggacgagcccgggtgcctgcctgaa
ggtggcactcaaagctcagtaggaccaggagaagtcaacgccctttctgagaccaaagac
cccttgaggtcctccgggcaggttgaagctggagcagaggctacggatgaaggtctgcgg
ctggaagcaggaaaaggtgtgatccccccagagattttcacgccaccaagccgcatcccg
atgctgagtgtggccgacgccgctctgtcaaaacacagctggaccgccgatctctctgct
gacggtgatgaccaagagtcagtgaggggagagctcaagtcctggtctagtcaaagtgac
ttgctgactgcagacgtccgtccggcgtcagcggccagcgtcggcagcgtggtggtccag
gaccgccttggccagctggtccggctcttcaaaggtcggacggaacgctacaaagaccgt
ctgcttgacccggatgaatcggaggaggaaagtcccgctacctctcccagcaaggctctg
ccacccccacccccacccccaccgggagaagaagacgagttggaccaccccaccagcaga
aaggagaaagaagaagaagaagaagacgaggcagccttgcactttcaacttctaagacat
gctgttaaaattctaaaatttcccggcatgcccaaatggctccaagccattgtggagttc
cggttcccctccagcatcgacccgtttactgatttggtttacgtggtgtggctgttctta
gtggtggcagcctggaactggaatgtttggctgatacccatacgctgggcctttccctac
cagagcccggagaacctcaacctgtggctcctggctgactacacctgcgacctcatctac
atcatggacatcctggtcttccaaccccgcttacagtttgtctccgggggagacatcgtg
tgcgacaaaaaggccatgagagaaaactacatgacgaccgagaggttcaagatggatgtc
atcagtctttttcccatggagatcttctactactggacaggagtcaactctctgctgaga
ttccctcgtctgcttaagtaccacgttttcttcgagttcaatgacaggatggaagcggta
atgaagaaggcctacatctacagggtgatccggacctccacctacctgctctactctctg
cacatcaacgcgtgcctcttttactggggctctgactacgaaggcttgggttccaccaag
tgggtgtacgatggaaaaggcaatgcgtacatccgctgctattactttgcggtgaagaca
ttgatcaccattggaggacttccggacccgaccaccgtctttgagatctgcttccagctc
atcaactattttgtcggagtctttgctttctcgatcatgatcggacaaatgagggacgtc
gtgggggcggccacggcgggggaaaactactaccgggcctgcatggacagcaccaccaag
tacatgaactcctacaacattcccaaccccgttcagaaccgcatcaagacctggtacgac
tacacgtggaagagccaagggatgctagatgagcaggagttgctggtgcaacttcccgcc
aaaatgagactggacatggccgtggacgtcaactactccatcgtcagcaaggtggcgctc
ttccagggttgtgatcgtcagatggtgttcgacatgctgacaagactgaaatctgtggtc
tacctgccaggagactttgtgtgcaagaagggtgagatcggcagagaaatgtacatcatc
aagcagggcgaggtccaagtggtcggcggtccggacctcaagacagtttttgttaccatc
agagcaggttcggtgtttggagagatcagtttgttggcggggggcggaggcaaccggcgc
accgccaacgtgaaggcgcacggattcgccaacctgttcatcctggataaaaaggacctg
gccgagatcctggtccactatccagaatcccagaaacttctccgcaagaaggccaagacc
atgctgaccaaggacaagaagccggacgaaaagggaggcagcaaagacgtcgcccaggtc
attccggttcgggctgacactcccaaaatgttcaatgtggcgctgagggtgacaacggag
gcggcgacggcgggagcctcggccaaagtccagaagagctatggccggcctcaggaccag
gctccgctctcacctcgacgtcgcggctcgtcggttgtcaccgtgacgtcttcaaaggaa
ggggaggcgcttctgtcggtggacgcagatagtggagctgagaagaagaagctgcaggaa
gacgctgagtaa
DBGET
integrated database retrieval system
