Syngnathoides biaculeatus (alligator pipefish): 133497873
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Entry
133497873 CDS
T09681
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133497873
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Other basic domains
RF-X
133497873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
133497873
NCBI-ProteinID:
XP_061670097
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All DBs
Position
3:8757443..8784440
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AA seq
1381 aa
AA seq
DB search
MAEEDPEQQQQQQQQQQRLLSGLQGADVGALQLRIKNSICKTVQSKVDGILQDVEKFTDI
EKLYLYLKLPSGPVSSASTEKSDQSAVSSSRTQQMHAFNWIRNHLEEYPETSLPKQEVYD
EYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKRPFVHFPCLP
SLELHKTGEGLQCDGMDSAGHLGSMKEEVRFAACDLVCEWAQKVLKRPFEAVEELARFLI
DSHYISNKSLAALTIMTGAATTTDVKPVQTVSAFVPTADAHCFQPHTATLSSPTVDAKQQ
LQRKIQRKQQEQKLHSPTPGEGLIQTVNDGGGQCGSPTSSSPQPTIGIVVTAVPRPVTTQ
QSHQLMSPSPAGSGEGKVLPINFQVVTQPVQPVKQLSKTSQNILSSQVGERAPRQRYPQI
LPKPATTTAIALCSPSTMIIANNPIKTVMTTCHVSPVSLVKMTAISLAPHSDNATTTFTN
TTMRPASAGISSCTLSEDILRSRQNTRSTSALPILARMTRPELVDTHDIDVELEVEDIHK
NGQNQNVSSLMMHHGALAQRAASVPIPQTKGFQSLEETSSKEYDGNLRLSNSTTAATEFG
INIKNNPTNTSTLNLTPSYQNMKAVSTCNTNIVSSFGECIYATRSFRKRSGLSPSPVLSP
VKRAFLSPHPEEGTPALGYGSRRPESAPVTREIEMKMNTLLPSQVHTLSNDSFRGSGFFA
VGKTQTSMHRKNTSNVMETSVGQPSIHQPEEPMISDGHCMPNNSNSSVGLHHVQQQTYAQ
ANPVSGPLDFLDQASTSSELPVQTDIEYFSFDDDVTQDSIVEELVQMEEQMKRNEQQFGN
NIMLQGQQAAMPHNVMPTNQTMNTFCHANSSGVNNLVQTPTPTPTSEFTGLQGLARESPC
SRVTPITPVDGTLGSSRHTPVGTPLSNCSSTVTPSPVECRNPFAFTPINSSITSFHDGSA
VSSSPVKPMQRPTATHPDKTRLDWMNNSCNSNTGSLNKSNSAIGILPSYQGLVDDQFQKP
HAFAIPHARHHDGRFGRLTPVSPVQQQVASMASTTRQEGFAVPAPLDNKTSNLLTTSGSF
RCRSVSPAVHPRNLVGNSVTSGLHNVHQQRVSPFNTQVTPEVFNILANNQGNLGVSSVAQ
RSRSVPLNIMMQTEVLPMPGQQCSGNNITDVLLSKLDADHDSVRGMGINNLPSGYTARMN
LTQIIQPENVSPIPSDSSGTRVSLRSNCLNNEQMFFSGSGGRAQPDSGGQHLQQAHPTQQ
TLSSQRQHLGFCDTFKDAPPDGSLHAGNQLVQEVSELAAGGADFPSELRMTSDLSSSIND
LNTLDANLLFDPSRQQGQYPGAAPEELDNQPLFQQITSSATHSGGLEWLESKDHTTVGLM
G
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggaccccgagcagcagcagcagcagcagcagcagcagcagcggctgctc
tccgggctccagggcgccgacgtcggggctctgcagctcaggatcaagaactccatctgc
aaaacggttcaatcgaaagtggacggcattctgcaagatgttgaaaagttcacagacatt
gaaaagctctacctctaccttaagttgccttctggtcccgtcagcagcgccagcactgag
aaaagtgatcagagtgctgtgtcatcaagccgcacgcagcagatgcacgccttcaactgg
atccgtaatcacttagaggaatacccggagacctcactccccaaacaggaggtctacgat
gaatacaagagtttctgcgacaatctcaactaccatccgctgagtgcggcagacttcgga
aaaatgatgaaaaacgtctttcccaacatgaaggcgcgccgacttggcatgagaggaaaa
tccaaatattgctatagtggactgaggaagaggccctttgtccactttccgtgtttacca
agtctggagctacacaaaactggagaaggactccagtgtgacggaatggactcagcgggc
cacctcggcagcatgaaggaggaggttcgcttcgcggcttgtgatctggtgtgcgagtgg
gctcaaaaggtgctgaaacggccgtttgaggccgtggaagagttggcccgcttcctgatc
gacagccactacataagcaacaagtcgctggcagctctcaccattatgacaggcgcggca
acgacaacagatgtcaagcctgtgcagacggtctcggcttttgtgcccaccgctgacgca
cactgcttccagcctcacacggcaactctgtcgtctccaactgttgatgccaagcagcag
ctccagaggaagatccaaaggaagcaacaagaacaaaagttgcactcacccacacccgga
gagggtttgatacagactgtaaatgacggcggtgggcaatgtggtagtccaacctcttcg
tcgcctcagccaaccattggcattgtggtcactgcagtcccaagacctgtcacgacacag
caaagccaccagctgatgtctcccagtccagcaggaagtggggagggcaaagtgctgcca
ataaacttccaagtggtgacccagccagttcagccagtgaaacaactgtcaaagacttcc
caaaatattctatcaagtcaagtaggagaacgcgcacctcggcagcgttatcctcaaatc
cttcccaaaccagcgaccaccacggcaatcgctttgtgctcgccctccacgatgattatt
gccaacaaccccatcaagacagtgatgaccacgtgtcacgtgagtcctgtcagtttggtc
aagatgacagccatatccctcgcgccccacagcgacaacgccacgactacctttacaaat
acgacaatgaggccagcatctgcaggcatcagcagctgtactctgtcagaggatatcctg
agatcccgtcaaaatacgaggagtacctccgctctccccattctggcccggatgacgagg
cctgagcttgtcgacacccatgacattgatgttgaattggaagttgaagatatccacaag
aacggacaaaaccaaaatgtgagcagtttaatgatgcatcatggagctctagcgcagagg
gctgctagtgtgcccatacctcaaactaaaggcttccaatccctggaggaaacttccagc
aaggaatatgatggaaatctccgcttgagcaacagcaccacagcggctactgaatttggc
attaatattaaaaacaacccaactaatacaagcactctgaatttaacgccttcctatcag
aatatgaaagctgtctctacgtgcaacaccaacatagtatcttcatttggagaatgtatt
tatgcgacgaggagcttccggaagcgctcaggcctcagtccgagcccggtcctctctcct
gtcaaaagggcttttctgtctccacacccagaagagggcactcctgctcttggatatggg
agtcgaagacctgagagtgcaccagtcacccgggagattgagatgaaaatgaacactctt
ctgcccagtcaagtccatacactttccaacgactctttcagaggtagcggtttcttcgct
gttggcaaaacacagacctcgatgcacaggaaaaacacttccaatgttatggaaacctct
gtcggtcagccatcaatccatcaaccggaggagcccatgatatctgacgggcattgcatg
cctaataattccaattcatcagtaggtctacatcatgttcaacaacagacctacgctcaa
gccaaccctgtttctggacccctggattttttggatcaagcatccacgtcaagtgaactc
cctgtgcagacagacatagaatacttctcgtttgatgacgatgttacacaagacagcatc
gtggaagagctggtccagatggaagagcagatgaaacgtaatgaacaacagtttggaaat
aatatcatgctacaagggcagcaggctgcgatgccacataacgtgatgcccaccaaccag
acaatgaacactttctgccatgctaacagcagtggcgtgaacaatctagttcaaacaccg
acacccactccaacatcagaatttactggacttcaaggtttggccagagagagcccctgc
tcacgtgtcacccccataacaccagtcgacggcaccctcggaagctctcgacacacgcca
gtcggtactccactctccaactgcagcagcactgtgacccccagccctgtggagtgcagg
aatcccttcgcatttacccccatcaactctagcattacaagtttccacgacggcagcgcg
gtctccagcagccccgtcaaacccatgcagaggccaacagccacccacccggataagacc
aggctggactggatgaataatagctgcaacagcaacactgggagcttgaataagtctaac
agtgccattggaatcttgcccagctatcagggcctcgtagatgaccagtttcaaaagcct
cacgccttcgccatccctcacgcaaggcaccacgatggtcgttttggccggttgactccc
gtttcccctgtgcagcagcaggtagcgagcatggctagcacgaccaggcaagaggggttc
gccgttcctgctcctcttgataacaagacctccaaccttctcactacgagtggatctttt
cggtgtcgcagtgttagccccgccgtgcacccgaggaacctggtcgggaattcggtaacc
agtggccttcacaatgtccaccagcagcgtgtttccccatttaacactcaggtaacgcct
gaagtgttcaacattttagcaaacaaccagggaaatcttggggtgagcagcgtggctcaa
agaagtcgctctgtgcccctcaacatcatgatgcagacggaggttctaccgatgcctggt
caacagtgcagcggtaacaatatcactgatgtccttctgagcaagctggatgcagaccat
gacagtgtgcggggaatggggattaataatttgccctccggctatacggcgcgcatgaat
ctcactcagatcatccagcctgagaatgtcagcccgatcccttcggactcctccggcaca
cgtgtgtcactaaggtcgaattgcctcaataatgaacaaatgtttttctctgggagtggc
gggcgagcacagccggactctgggggacagcatctgcagcaggctcaccccacacagcaa
actttgagttcacagagacagcatttgggtttctgtgacacgtttaaagatgccccaccg
gacggcagccttcatgccggcaatcagctggtgcaagaggtatcggagctagcggcagga
ggggcagattttccaagcgaactcagaatgacttcggacttgtccagtagcattaatgac
ctgaatacactggatgcaaaccttctgtttgaccccagtcgtcagcaagggcaatatcca
ggtgctgcaccggaggaattggacaatcagcctctgtttcagcaaatcaccagcagcgcg
acacattctggtggactcgagtggcttgagagcaaagatcacacaactgtcggtttgatg
gggtga
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