Syngnathoides biaculeatus (alligator pipefish): 133497874
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Entry
133497874 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
sbia04144
Endocytosis
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133497874
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133497874
09144 Cellular community - eukaryotes
04530 Tight junction
133497874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133497874
04121 Ubiquitin system [BR:
sbia04121
]
133497874
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133497874
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133497874
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133497874
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
HECT type E3
133497874
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
133497874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
133497874
NCBI-ProteinID:
XP_061670099
LinkDB
All DBs
Position
3:8785700..8824393
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AA seq
1228 aa
AA seq
DB search
MAHRLRLDFASRRSHTDPLSECLSSHGEESGVILSAGSPTKSLAHSSLHFKVTSLSPDYG
HLQRYSSVFIPRVNTAGCSQKSVVQISLQPCGTLTGDRDGAVGDGDPGSSDPGVVAGSDG
GSCSSSMASDAGYWSSNSIFEPETSEKHRTTQERSFLCCHSKVPLRRCSSLVIFPKSPCT
TPPASPVNPVALPPLPATRAPFQAPAPECSRDEQDMTWKESATSISGQRCLKGNSSSECR
DTKHMVHFNIPLQDKPIFKELDSNDVMEQSSAHEKSQRHSRSVLLHFAHHRPVTGKVSPE
YPDATYPVAEPETQHNPKKKLYRSTSACLFSSVKHSEEKLCALAKEQERLEEKHCHRAIQ
RSFSLEVPYANTGISCHVSNTKLGSTYSPHVHIHLSPCCPAKLPSLPNDAYASCKGSSTA
KNLSQNEKTRDDFLGQVDVPLNQIPTENPNAQRPYTFKDFLLHPRSHKSRVKGHLRLKMT
YMPRNTGSDEEPTDQNDNTDPSWELLESQDMSGPMQSEQTPALPPGWEERQDNLGRTFYV
HHESRTTQWGPPTLQDNNLDTRRQQSTRETAQNCITRRQISDPDETSGQDEEWEVFRDDE
FSSNQGNQLTSPPPQMPPEIQMLNDEFRNIYIPGATACEHQVDHACNSSHSVRTRSFHTS
TAEEHPVNSVLLGTSGGLPPGWEEKRDSKGRRYYINHNTRTTSWIRPRVQRTQSASGAVH
SSAGTPPFQSVSAEASPQHTPNAEAALESGSMPAGWEVRSAPNGRPFFIDHNTKTTTWQD
PRLILPVHARSRPALDPSDLGPLPPGWEERVHTDGRIFYIDHNTKTTQWDDPRLQNSAIT
GPAVPYSRDYKQKYDYFRKKLKKPDNIPNRFEMKVRRNGVLEDSYRQILLVKRPDLLKAR
LWVEFEGEKGLDYGGLAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHL
TYFKCIGRVAGMAVWHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILEND
PTDLDLMFTIDEELFGQTHQHELKPDGAEIVVTNDNKKEYIHLVMQWRFVNRIQKQMTAF
KDGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWRQNTKYKSGYNSNHVVIHWFWKAV
LLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQRFTIELWGTRDKLPRAHTCFNRLD
LPPYESFEELREKLHIAIENAQGFDGVD
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccggctccgtttggacttcgcgtcaaggagaagccacaccgaccctctgtca
gagtgcctcagcagccatggtgaagagagtggagtcattttgtcagctggtagccccaca
aagagtctggcgcacagttctctacacttcaaggtgacttcgttgtcaccggactatgga
catttacaacgatattcttcagtttttataccgagggttaatacagcaggatgtagtcaa
aaaagcgttgtgcagatctctctacagccctgcggcacgctcaccggagaccgggatggc
gccgttggggatggagatcccgggagcagtgacccgggagtggttgcaggttctgatggg
ggttcgtgtagcagcagtatggccagcgatgccgggtactggagtagcaacagtatcttt
gagccagagacttcagaaaagcacaggactacccaagagaggagttttctctgctgccac
tccaaggtccccttgagacgctgttcctccttggttatattcccaaagagcccctgtacc
accccacctgcttctccggtaaacccagtggctctccctcctctcccagcaacgagagct
ccgttccaggcacctgcccccgagtgctcacgggatgaacaggatatgacttggaaagag
tctgccacctctataagtggccaacgttgtctgaaaggaaactcttcatccgagtgtcgg
gacaccaaacatatggtacattttaatattcctttgcaagacaaacctatatttaaagag
ctggacagcaatgatgtgatggaacagtcatcagctcatgaaaaatctcagcgtcattca
aggagcgttctgctacactttgcccatcacagaccagttacaggtaaagtcagtccggaa
tatcctgacgctacttacccagttgcagagcccgagactcagcacaaccctaagaaaaaa
ctgtaccggagtacctcggcttgtttgttctcctcggtgaaacactcagaggaaaaactc
tgtgccttagcaaaagaacaagaaaggttggaggaaaagcattgccatcgtgccattcaa
cgcagcttttctctggaggtgccctatgcaaacactgggatttcatgtcacgtttcgaac
acaaaactcggtagtacatactctccgcacgtgcacattcatctgtcaccgtgctgtcca
gctaaattgccgagcctacctaatgacgcatacgcaagctgcaaagggagcagtaccgca
aagaacttaagccaaaatgagaagacacgtgatgactttctgggacaggtggatgttcct
ctcaatcagataccaacagaaaatcctaatgcacaaaggccttacacattcaaggatttt
ctgcttcaccccagaagtcacaagtccagagttaagggccatctgcgacttaaaatgacc
tacatgccaagaaacacgggctcagacgaggagccgacagatcagaatgacaacacagat
ccctcatgggagttattggaatctcaggacatgtcaggtcctatgcagagcgagcagaca
cctgctctgccccctggctgggaggagcgtcaggacaacctgggaagaaccttctatgtc
caccacgagagcagaactacgcagtggggcccaccgaccttacaagacaataatctggac
acaaggcgacaacaaagtacaagagagacggcgcagaattgtattacacgcagacagatc
tcagacccggatgagacctctgggcaagatgaggaatgggaagtttttagagacgatgaa
ttctcttcaaaccagggcaaccaactcacatcgcccccacctcagatgcccccggagata
cagatgttaaatgacgagtttagaaacatttatattccaggggccacagcttgcgagcac
caggtggatcacgcgtgcaattcaagccattccgttcgcacgagaagttttcacacgtca
acagcagaggagcatcctgttaattctgtgctgcttgggacctctggggggctgcctcca
ggatgggaggaaaagagagacagtaaaggaagacgatattatatcaaccacaatacccga
accacttcgtggatacgaccccgtgtgcagagaactcagtcagcgtcaggggccgtgcac
agcagtgcgggtacaccgcccttccagtccgtgtccgctgaggcatctccccaacacact
ccgaacgcggaagccgcacttgaatctggctccatgccagccggttgggaggtccggagc
gctcccaatggaagaccctttttcatcgaccacaatacaaaaactactacctggcaagat
cccaggcttatacttcctgtgcatgcgaggagcagacctgcacttgacccatccgatctt
ggcccattgccacctggttgggaggagagggtacacacagacgggaggatattctacatt
gatcacaacaccaagactacacaatgggatgatcctaggttacaaaactcagcaataact
ggaccagcagtgccttattccagagattataaacaaaagtatgactacttccgcaagaag
ttgaagaaaccagacaacatcccaaatagatttgagatgaaagtgagaagaaacggagtg
ctggaggactcgtatcggcaaatcctcctggttaagcggccagacctgttgaaagcacgg
ctgtgggtggagtttgagggagaaaagggtttggactacggaggcttggcccgggagtgg
ttcttcctcatgtctaaggagatgttcaacccctactatggactctttgaatattctgcc
acggacaactacacactgcagattaatcccaattcaggtctatgcaacgaggaccatctg
acgtacttcaagtgtattggccgtgtggcaggcatggccgtctggcacggaaagttgctt
gacgctttcttcattcggcccttctacaagatgatgttgcagaagcccataacgttgcag
gacatggagtccgtcgatagtgaatattttaattcactcaaatggattttggagaacgac
ccaactgacctggatttgatgttcaccattgacgaggaactttttggccaaactcaccag
catgagctgaagcccgatggtgcagagattgttgtcactaatgacaacaagaaggaatac
atccatcttgtgatgcagtggcgctttgtaaaccgaattcagaagcagatgactgccttc
aaggatggattttttgagttgatccctcaagatctgatcaagatctttgacgagaacgag
cttgagttgctcatgtgtggtctcggagatgtagacgtgaacgactggagacagaacacc
aagtacaagagtggctacaattccaaccacgtcgttatccactggttttggaaagcagta
ctgctgatggatgctgaaaagcgaattcggctcttacagtttgtgacaggaacgtccaga
gtcccgatgaatggttttgctgaactttacggatcgaatggtccgcaacggttcaccatt
gagctttggggaacgcgtgacaaacttccccgagcacacacgtgctttaaccgtctggac
cttccaccctacgagtcgttcgaggaattgcgggagaaacttcacatcgccatcgagaat
gcgcagggcttcgacggcgtggactag
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integrated database retrieval system
