Syngnathoides biaculeatus (alligator pipefish): 133497886
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Entry
133497886 CDS
T09681
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133497886 (ctcf)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133497886 (ctcf)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133497886 (ctcf)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133497886 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
LIM
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_REST
zf-WIZ
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
133497886
NCBI-ProteinID:
XP_061670116
LinkDB
All DBs
Position
3:complement(8976975..8985939)
Genome browser
AA seq
748 aa
AA seq
DB search
MEGDVVSMETALAPEGGVLPEAGDAVIEGSAGTPQAVEVPGNMEMMVMDALDPALLQMKT
EVLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTSATVDGLQATYA
DGSANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAVHDELQGTREEEEPEDG
DVADQEPPESQPGWQKDPDYQPVTTVRKGKKGKKSRLRYADGDRDMDVSVYDFEEEQQEG
LLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHK
CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSM
CDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHAR
FTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKKCRYCDAV
FHERYALIQHQKTHKNEKRFKCDQCDYCCKQERHMIMHKRTHTGEKPFACSQCEKTFRQK
QLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHSENCIGEVAGDQNGTPPKKSRR
GRKRKMQDRHDDDDEDTEAELDEMEDEEDLLDDIELEQAPPVVPIAAPEEPPVKRKRGRP
PKNRSNVAAIIRVEDEATGEVDDIIVKKEVGAEQDELEEEGAAQEVVVGEGDTAIQMEEL
SQEQEMQLSEAPPNGDLTPEMILSMMDR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacgttgtttccatggagactgcccttgctcctgaaggtggggttctccca
gaagcaggagacgctgtcatcgaagggtcagcgggaaccccacaagcggtggaggttcct
ggcaacatggagatgatggtgatggacgccctagatccggccctgctgcagatgaagacc
gaggtgttggagggaggaggcacagtgactgtaaccggtggagacgagggtcagatcatc
accctgcaggttgtaaatatggaggaacaggctggtgctgctttaggactcggacagctt
caacttgtgcaggttccagtcacttcagctacagtggatggcctccaggcaacatacgca
gatggttcagctaataaagatgcagagccagttatctgtcacaccctccccttgcctgaa
ggcttccaggtggtgaaagtgggagccaacggtgaagtggagactgtagagcaagaggag
cttcaggcagtccacgatgagcttcaagggacgagggaagaggaggaaccggaggacggt
gacgtggctgatcaggaaccgcccgagtctcaaccgggatggcagaaggaccccgactac
cagcccgttacaactgtccgcaaaggaaagaaggggaaaaagagccgtctgcgctatgcc
gacggtgacagagacatggatgtttcggtttatgactttgaagaagagcaacaagaggga
ctgctgtcagaggtcaacgccgagaaggttgtcggaaacatgaagcctcccaagcccaca
aagatcaagaaaaagggtgtaaagaagaccttccagtgtgaactgtgtagctacacttgt
ccacgacgctccaacctggaccgacacatgaaaagccacacggacgaaaggccgcacaaa
tgtcacttgtgcggaagagccttcagaacagtcacactgctgagaaaccacctcaacact
cacacaggcaccagaccgcacaaatgcacagattgtgacatggcctttgtgaccagtgga
gagttggtgcgccatcgtcgctacaagcacacacacgagaagcccttcaagtgctccatg
tgcgactattgcagtgtggaggttagtaaattgaagaggcacattcgctctcacaccgga
gagcggccctttcagtgcagtctatgcagctacgctagtagagacacgtacaagctgaaa
agacacatgaggacacactcaggcgaaaagccctacgagtgttatatctgccatgcgcgt
ttcacccagagcggcaccatgaagatgcacattctgcagaaacacacggaaaatgtggcc
aagttccattgtccacattgtgacaccgttatcgcccgcaagagcgacctcggcgttcac
ttgcgaaaacagcattcatttattgagaagggaaagaaatgtcgttattgcgatgccgtg
tttcacgagcgatacgctctcatccagcaccagaagacacacaagaatgagaaacgcttc
aagtgcgaccagtgtgactactgctgcaaacaggaacggcacatgatcatgcacaagcgt
acacacactggagagaagccatttgcttgtagtcagtgtgagaaaacgttcagacaaaag
cagcttctggacatgcacttcaagcgttaccacgatcccaactttgtgcctaccgccttc
gtctgcagcaagtgtagcaagacattcacccgcaggaataccatgctgcgccacagcgag
aactgcattggtgaagttgccggagaccaaaacggaactccacctaaaaagagtcgccgg
ggcaggaagaggaagatgcaggacaggcatgatgacgatgacgaggacacagaagccgaa
cttgatgaaatggaagatgaagaggatttgttagatgatatcgaactggaacaggctcca
ccggtagttcccattgcagcccccgaagaaccaccagtcaagagaaagcgtgggcgcccg
ccaaagaacaggtccaacgtggccgccatcatccgcgtagaggacgaggccaccggagag
gtagatgacatcatcgtgaaaaaggaggtgggtgccgaacaggacgagctggaagaggag
ggggccgcgcaggaagtggttgtcggcgaaggagacaccgctattcagatggaggagctg
tcacaggaacaggagatgcagctgtcagaggccccccctaacggagacctcactcccgag
atgatcctgagcatgatggaccggtga
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